RNA–Protein interactions for RNA: ENST00000421259.2

MATN3-202, Transcript of matrilin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MATN3, Length 1,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3-202ENST00000421259 NISCHQ9Y2I1 1504 aa39.77■■■■□ 3.96
MATN3-202ENST00000421259 CCDC180Q9P1Z9 1646 aa35.33■■■■□ 3.25
MATN3-202ENST00000421259 ABCC9O60706 1549 aa34.88■■■■□ 3.17
MATN3-202ENST00000421259 DCAF8L2P0C7V8 631 aa33.5■■■□□ 2.95
MATN3-202ENST00000421259 RB1CC1Q8TDY2 1594 aa33.38■■■□□ 2.93
MATN3-202ENST00000421259 NACADO15069 1562 aa33.29■■■□□ 2.92
MATN3-202ENST00000421259 ZCCHC6Q5VYS8 1495 aaKnown RBP33.08■■■□□ 2.89
MATN3-202ENST00000421259 MYO15BQ96JP2 1530 aa32.98■■■□□ 2.87
MATN3-202ENST00000421259 DCAF1Q9Y4B6 1507 aa32.82■■■□□ 2.84
MATN3-202ENST00000421259 UNC13AQ9UPW8 1703 aa32.65■■■□□ 2.82
MATN3-202ENST00000421259 PABPN1Q86U42 306 aaKnown RBP eCLIP32.64■■■□□ 2.82
MATN3-202ENST00000421259 BICRAQ9NZM4 1560 aa32.41■■■□□ 2.78
MATN3-202ENST00000421259 SCRIBQ14160 1630 aa32.36■■■□□ 2.77
MATN3-202ENST00000421259 DNAJC5BQ9UF47 199 aa32.2■■■□□ 2.75
MATN3-202ENST00000421259 SHROOM4Q9ULL8 1493 aa31.91■■■□□ 2.7
MATN3-202ENST00000421259 EIF4G1Q04637 1599 aaKnown RBP31.56■■■□□ 2.64
MATN3-202ENST00000421259 CC2D2AQ9P2K1 1620 aa31.49■■■□□ 2.63
MATN3-202ENST00000421259 CECR2Q9BXF3 1484 aa31.31■■■□□ 2.6
MATN3-202ENST00000421259 SMARCA4P51532 1647 aa30.88■■■□□ 2.53
MATN3-202ENST00000421259 BAZ1AQ9NRL2 1556 aaPredicted RBP30.81■■■□□ 2.52
MATN3-202ENST00000421259 ATAD2BQ9ULI0 1458 aa30.77■■■□□ 2.52
MATN3-202ENST00000421259 NCAPD3P42695 1498 aa30.74■■■□□ 2.51
MATN3-202ENST00000421259 MROH2BQ7Z745 1585 aa30.7■■■□□ 2.5
MATN3-202ENST00000421259 SMARCA2P51531 1590 aa30.68■■■□□ 2.5
MATN3-202ENST00000421259 HMGXB3Q12766 1538 aa30.54■■■□□ 2.48
MATN3-202ENST00000421259 PEG3Q9GZU2 1588 aa30.52■■■□□ 2.48
MATN3-202ENST00000421259 BAZ1BQ9UIG0 1483 aaKnown RBP30.51■■■□□ 2.47
MATN3-202ENST00000421259 WIZO95785 1651 aa30.37■■■□□ 2.45
MATN3-202ENST00000421259 RSF1Q96T23 1441 aaPredicted RBP30.29■■■□□ 2.44
MATN3-202ENST00000421259 NESP48681 1621 aa30.15■■■□□ 2.42
MATN3-202ENST00000421259 ERCC6Q03468 1493 aa30.04■■■□□ 2.4
MATN3-202ENST00000421259 TOP2AP11388 1531 aaKnown RBP29.97■■■□□ 2.39
MATN3-202ENST00000421259 LAMC3Q9Y6N6 1575 aa29.94■■■□□ 2.38
MATN3-202ENST00000421259 CADPSQ9ULU8 1353 aa29.88■■■□□ 2.37
MATN3-202ENST00000421259 PDS5BQ9NTI5 1447 aa29.78■■■□□ 2.36
MATN3-202ENST00000421259 KIF21AQ7Z4S6 1674 aa29.73■■■□□ 2.35
MATN3-202ENST00000421259 CUX2O14529 1486 aa29.69■■■□□ 2.34
MATN3-202ENST00000421259 CCDC88BA6NC98 1476 aa29.68■■■□□ 2.34
MATN3-202ENST00000421259 CFTRP13569 1480 aa29.65■■■□□ 2.34
MATN3-202ENST00000421259 THOC2Q8NI27 1593 aaKnown RBP29.62■■■□□ 2.33
MATN3-202ENST00000421259 SUPT5HO00267 1087 aaKnown RBP29.56■■■□□ 2.32
MATN3-202ENST00000421259 FANCD2Q9BXW9 1451 aa29.54■■■□□ 2.32
MATN3-202ENST00000421259 CEP164Q9UPV0 1460 aa29.5■■■□□ 2.31
MATN3-202ENST00000421259 MRC2Q9UBG0 1479 aa29.47■■■□□ 2.31
MATN3-202ENST00000421259 WDR62O43379 1518 aa29.35■■■□□ 2.29
MATN3-202ENST00000421259 PRDM2Q13029 1718 aa29.35■■■□□ 2.29
MATN3-202ENST00000421259 URB2Q14146 1524 aaKnown RBP29.26■■■□□ 2.28
MATN3-202ENST00000421259 TOPBP1Q92547 1522 aa29.05■■■□□ 2.24
MATN3-202ENST00000421259 DNAJC5Q9H3Z4 198 aa29.04■■■□□ 2.24
MATN3-202ENST00000421259 ABCC8Q09428 1581 aa28.97■■■□□ 2.23
MATN3-202ENST00000421259 DNMBPQ6XZF7 1577 aa28.97■■■□□ 2.23
MATN3-202ENST00000421259 IFT140Q96RY7 1462 aa28.87■■■□□ 2.21
MATN3-202ENST00000421259 ZNF608Q9ULD9 1512 aaPredicted RBP28.82■■■□□ 2.2
MATN3-202ENST00000421259 POLA1P09884 1462 aaPredicted RBP28.79■■■□□ 2.2
MATN3-202ENST00000421259 CUX1P39880 1505 aa28.79■■■□□ 2.2
MATN3-202ENST00000421259 RAD54L2Q9Y4B4 1467 aa28.73■■■□□ 2.19
MATN3-202ENST00000421259 TARBP1Q13395 1621 aaKnown RBP28.72■■■□□ 2.19
MATN3-202ENST00000421259 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
MATN3-202ENST00000421259 SOGA1O94964 1423 aa28.71■■■□□ 2.19
MATN3-202ENST00000421259 AQRO60306 1485 aaKnown RBP eCLIP28.66■■■□□ 2.182e-9■■■■■ 30.3
MATN3-202ENST00000421259 EIF4G3O43432 1585 aaKnown RBP28.64■■■□□ 2.18
MATN3-202ENST00000421259 TDRD9Q8NDG6 1382 aaKnown RBP28.61■■■□□ 2.17
MATN3-202ENST00000421259 WRNQ14191 1432 aaPredicted RBP eCLIP28.56■■■□□ 2.16
MATN3-202ENST00000421259 OSCARQ8IYS5 282 aa28.54■■■□□ 2.16
MATN3-202ENST00000421259 SYNJ1O43426 1573 aa28.49■■■□□ 2.15
MATN3-202ENST00000421259 TOP2BQ02880 1626 aa28.47■■■□□ 2.15
MATN3-202ENST00000421259 BIVM-ERCC5R4GMW8 1640 aa28.45■■■□□ 2.14
MATN3-202ENST00000421259 WDR97A6NE52 1622 aa28.42■■■□□ 2.14
MATN3-202ENST00000421259 FBLN2P98095 1184 aa28.42■■■□□ 2.14
MATN3-202ENST00000421259 ABCA10Q8WWZ4 1543 aa28.39■■■□□ 2.14
MATN3-202ENST00000421259 SNAPC4Q5SXM2 1469 aa28.35■■■□□ 2.13
MATN3-202ENST00000421259 GRIN2BQ13224 1484 aa28.35■■■□□ 2.13
MATN3-202ENST00000421259 GAPVD1Q14C86 1478 aa28.35■■■□□ 2.13
MATN3-202ENST00000421259 CHD1O14646 1710 aa28.32■■■□□ 2.12
MATN3-202ENST00000421259 ABCA5Q8WWZ7 1642 aa28.28■■■□□ 2.12
MATN3-202ENST00000421259 PBRM1Q86U86 1689 aa28.26■■■□□ 2.12
MATN3-202ENST00000421259 CHMP7Q8WUX9 453 aaPredicted RBP28.26■■■□□ 2.11
MATN3-202ENST00000421259 MAGI1Q96QZ7 1491 aaPredicted RBP28.25■■■□□ 2.11
MATN3-202ENST00000421259 SYNJ2O15056 1496 aa28.17■■■□□ 2.1
MATN3-202ENST00000421259 TRIM41Q8WV44 630 aa28.13■■■□□ 2.09
MATN3-202ENST00000421259 RIMBP3CA6NJZ7 1639 aa28.05■■■□□ 2.08
MATN3-202ENST00000421259 RIMBP3BA6NNM3 1639 aa28.05■■■□□ 2.08
MATN3-202ENST00000421259 RIMBP3Q9UFD9 1639 aa28.05■■■□□ 2.08
MATN3-202ENST00000421259 ARHGEF11O15085 1522 aa28.03■■■□□ 2.08
MATN3-202ENST00000421259 ERICH3Q5RHP9 1530 aa28.03■■■□□ 2.08
MATN3-202ENST00000421259 ADAMTS12P58397 1594 aa28.02■■■□□ 2.08
MATN3-202ENST00000421259 FHAD1B1AJZ9 1412 aa28■■■□□ 2.07
MATN3-202ENST00000421259 CLASP1Q7Z460 1538 aa27.98■■■□□ 2.07
MATN3-202ENST00000421259 GRIN2AQ12879 1464 aa27.98■■■□□ 2.07
MATN3-202ENST00000421259 KIF27Q86VH2 1401 aa27.96■■■□□ 2.07
MATN3-202ENST00000421259 IGF1RP08069 1367 aa27.9■■■□□ 2.06
MATN3-202ENST00000421259 CYB5RLQ6IPT4 315 aa27.89■■■□□ 2.06
MATN3-202ENST00000421259 CEP170Q5SW79 1584 aa27.86■■■□□ 2.05
MATN3-202ENST00000421259 NUP160Q12769 1436 aa27.84■■■□□ 2.05
MATN3-202ENST00000421259 ARAP1Q96P48 1450 aa27.81■■■□□ 2.04
MATN3-202ENST00000421259 RUSC2Q8N2Y8 1516 aa27.75■■■□□ 2.03
MATN3-202ENST00000421259 CUL7Q14999 1698 aa27.74■■■□□ 2.03
MATN3-202ENST00000421259 CARMIL1Q5VZK9 1371 aa27.74■■■□□ 2.03
MATN3-202ENST00000421259 ERCC6L2Q5T890 1561 aa27.68■■■□□ 2.02
MATN3-202ENST00000421259 JPH4Q96JJ6 628 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms