RNA–Protein interactions for RNA: ENST00000411651.6

SUMO3-204, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-204ENST00000411651 NISCHQ9Y2I1 1504 aa44.2■■■■■ 4.67
SUMO3-204ENST00000411651 CCDC180Q9P1Z9 1646 aa38.27■■■■□ 3.72
SUMO3-204ENST00000411651 ZCCHC6Q5VYS8 1495 aaKnown RBP37.3■■■■□ 3.56
SUMO3-204ENST00000411651 DCAF1Q9Y4B6 1507 aa36.67■■■■□ 3.46
SUMO3-204ENST00000411651 SHROOM4Q9ULL8 1493 aa36.3■■■■□ 3.4
SUMO3-204ENST00000411651 MYO15BQ96JP2 1530 aa36.01■■■■□ 3.35
SUMO3-204ENST00000411651 DCAF8L2P0C7V8 631 aa35.99■■■■□ 3.35
SUMO3-204ENST00000411651 NACADO15069 1562 aa35.47■■■■□ 3.27
SUMO3-204ENST00000411651 ABCC9O60706 1549 aa35.36■■■■□ 3.25
SUMO3-204ENST00000411651 SUPT5HO00267 1087 aaKnown RBP35.3■■■■□ 3.24
SUMO3-204ENST00000411651 SCRIBQ14160 1630 aa35.13■■■■□ 3.21
SUMO3-204ENST00000411651 RB1CC1Q8TDY2 1594 aa34.96■■■■□ 3.19
SUMO3-204ENST00000411651 RSF1Q96T23 1441 aaPredicted RBP34.53■■■■□ 3.12
SUMO3-204ENST00000411651 CHIC1Q5VXU3 224 aa34.28■■■■□ 3.08
SUMO3-204ENST00000411651 UNC13AQ9UPW8 1703 aa34.22■■■■□ 3.07
SUMO3-204ENST00000411651 CECR2Q9BXF3 1484 aa34.19■■■■□ 3.06
SUMO3-204ENST00000411651 MROH2BQ7Z745 1585 aa34.11■■■■□ 3.05
SUMO3-204ENST00000411651 BAZ1AQ9NRL2 1556 aaPredicted RBP34.1■■■■□ 3.05
SUMO3-204ENST00000411651 BICRAQ9NZM4 1560 aa33.87■■■■□ 3.01
SUMO3-204ENST00000411651 WIZO95785 1651 aa33.85■■■■□ 3.01
SUMO3-204ENST00000411651 SMARCA4P51532 1647 aa33.82■■■■□ 3
SUMO3-204ENST00000411651 TOP2AP11388 1531 aaKnown RBP33.61■■■□□ 2.97
SUMO3-204ENST00000411651 PEG3Q9GZU2 1588 aa33.47■■■□□ 2.95
SUMO3-204ENST00000411651 PABPN1Q86U42 306 aaKnown RBP eCLIP33.43■■■□□ 2.94
SUMO3-204ENST00000411651 EIF4G1Q04637 1599 aaKnown RBP33.36■■■□□ 2.93
SUMO3-204ENST00000411651 SMARCA2P51531 1590 aa33.29■■■□□ 2.92
SUMO3-204ENST00000411651 TRIM41Q8WV44 630 aa33.23■■■□□ 2.91
SUMO3-204ENST00000411651 CCDC88BA6NC98 1476 aa33.22■■■□□ 2.91
SUMO3-204ENST00000411651 ATAD2BQ9ULI0 1458 aa33.08■■■□□ 2.89
SUMO3-204ENST00000411651 BAZ1BQ9UIG0 1483 aaKnown RBP32.91■■■□□ 2.86
SUMO3-204ENST00000411651 LOC105371045A0A1W2PR82 267 aa32.87■■■□□ 2.85
SUMO3-204ENST00000411651 HMGXB3Q12766 1538 aa32.77■■■□□ 2.84
SUMO3-204ENST00000411651 NCAPD3P42695 1498 aa32.73■■■□□ 2.83
SUMO3-204ENST00000411651 ABCC8Q09428 1581 aa32.69■■■□□ 2.82
SUMO3-204ENST00000411651 FAM9AQ8IZU1 332 aaPredicted RBP32.49■■■□□ 2.79
SUMO3-204ENST00000411651 EEA1Q15075 1411 aa32.49■■■□□ 2.79
SUMO3-204ENST00000411651 WRNQ14191 1432 aaPredicted RBP eCLIP32.48■■■□□ 2.79
SUMO3-204ENST00000411651 SYNJ1O43426 1573 aa32.29■■■□□ 2.76
SUMO3-204ENST00000411651 SOGA1O94964 1423 aa32.23■■■□□ 2.75
SUMO3-204ENST00000411651 CFTRP13569 1480 aa32.19■■■□□ 2.74
SUMO3-204ENST00000411651 TOP2BQ02880 1626 aa32.17■■■□□ 2.74
SUMO3-204ENST00000411651 BIVM-ERCC5R4GMW8 1640 aa32.14■■■□□ 2.74
SUMO3-204ENST00000411651 PCGF6Q9BYE7 350 aa32.13■■■□□ 2.73
SUMO3-204ENST00000411651 CSRNP3Q8WYN3 585 aa32.1■■■□□ 2.73
SUMO3-204ENST00000411651 CC2D2AQ9P2K1 1620 aa32.09■■■□□ 2.73
SUMO3-204ENST00000411651 TRIM26Q12899 539 aaPredicted RBP32.08■■■□□ 2.73
SUMO3-204ENST00000411651 PRDM2Q13029 1718 aa32.08■■■□□ 2.73
SUMO3-204ENST00000411651 TNIKQ9UKE5 1360 aa32.04■■■□□ 2.72
SUMO3-204ENST00000411651 RUSC2Q8N2Y8 1516 aa32.03■■■□□ 2.72
SUMO3-204ENST00000411651 GOLGA3Q08378 1498 aa32■■■□□ 2.71
SUMO3-204ENST00000411651 KIF21BO75037 1637 aa31.99■■■□□ 2.71
SUMO3-204ENST00000411651 CEP164Q9UPV0 1460 aa31.94■■■□□ 2.7
SUMO3-204ENST00000411651 CADPSQ9ULU8 1353 aa31.89■■■□□ 2.7
SUMO3-204ENST00000411651 HRCP23327 699 aa31.89■■■□□ 2.7
SUMO3-204ENST00000411651 EHMT2Q96KQ7 1210 aa31.89■■■□□ 2.7
SUMO3-204ENST00000411651 CEP162Q5TB80 1403 aa31.87■■■□□ 2.69
SUMO3-204ENST00000411651 CUX1P39880 1505 aa31.87■■■□□ 2.69
SUMO3-204ENST00000411651 UBTFP17480 764 aaKnown RBP31.67■■■□□ 2.66
SUMO3-204ENST00000411651 ERICH3Q5RHP9 1530 aa31.67■■■□□ 2.66
SUMO3-204ENST00000411651 KIF27Q86VH2 1401 aa31.62■■■□□ 2.65
SUMO3-204ENST00000411651 PRXQ9BXM0 1461 aa31.61■■■□□ 2.65
SUMO3-204ENST00000411651 RAPGEF2Q9Y4G8 1499 aa31.58■■■□□ 2.65
SUMO3-204ENST00000411651 FANCD2Q9BXW9 1451 aa31.52■■■□□ 2.64
SUMO3-204ENST00000411651 LAMC3Q9Y6N6 1575 aa31.5■■■□□ 2.63
SUMO3-204ENST00000411651 CLIP1P30622 1438 aa31.46■■■□□ 2.63
SUMO3-204ENST00000411651 DNMBPQ6XZF7 1577 aa31.41■■■□□ 2.62
SUMO3-204ENST00000411651 FGD5Q6ZNL6 1462 aa31.4■■■□□ 2.62
SUMO3-204ENST00000411651 VPS8Q8N3P4 1428 aa31.34■■■□□ 2.61
SUMO3-204ENST00000411651 CUX2O14529 1486 aa31.32■■■□□ 2.6
SUMO3-204ENST00000411651 NESP48681 1621 aa31.27■■■□□ 2.6
SUMO3-204ENST00000411651 TOPBP1Q92547 1522 aa31.27■■■□□ 2.6
SUMO3-204ENST00000411651 ZEB1P37275 1124 aaPredicted RBP31.25■■■□□ 2.59
SUMO3-204ENST00000411651 IGF1RP08069 1367 aa31.23■■■□□ 2.59
SUMO3-204ENST00000411651 ABCA10Q8WWZ4 1543 aa31.21■■■□□ 2.59
SUMO3-204ENST00000411651 PDS5BQ9NTI5 1447 aa31.2■■■□□ 2.59
SUMO3-204ENST00000411651 POLA1P09884 1462 aaPredicted RBP31.17■■■□□ 2.58
SUMO3-204ENST00000411651 PPARGC1BQ86YN6 1023 aaKnown RBP31.16■■■□□ 2.58
SUMO3-204ENST00000411651 URB2Q14146 1524 aaKnown RBP31.08■■■□□ 2.57
SUMO3-204ENST00000411651 CARMIL1Q5VZK9 1371 aa31.08■■■□□ 2.57
SUMO3-204ENST00000411651 ARAP1Q96P48 1450 aa31.08■■■□□ 2.57
SUMO3-204ENST00000411651 WDR97A6NE52 1622 aa31.04■■■□□ 2.56
SUMO3-204ENST00000411651 CUL7Q14999 1698 aa31■■■□□ 2.55
SUMO3-204ENST00000411651 RAD54L2Q9Y4B4 1467 aa31■■■□□ 2.55
SUMO3-204ENST00000411651 KIF21AQ7Z4S6 1674 aa30.95■■■□□ 2.54
SUMO3-204ENST00000411651 ARHGAP35Q9NRY4 1499 aa30.95■■■□□ 2.54
SUMO3-204ENST00000411651 APLP2Q06481 763 aa30.94■■■□□ 2.54
SUMO3-204ENST00000411651 DNAJC5BQ9UF47 199 aa30.9■■■□□ 2.54
SUMO3-204ENST00000411651 ABCA5Q8WWZ7 1642 aa30.88■■■□□ 2.53
SUMO3-204ENST00000411651 RANGAP1P46060 587 aaPredicted RBP30.78■■■□□ 2.52
SUMO3-204ENST00000411651 MAP3K1Q13233 1512 aa30.76■■■□□ 2.51
SUMO3-204ENST00000411651 TARBP1Q13395 1621 aaKnown RBP30.76■■■□□ 2.51
SUMO3-204ENST00000411651 TTBK1Q5TCY1 1321 aaPredicted RBP30.75■■■□□ 2.51
SUMO3-204ENST00000411651 MRC2Q9UBG0 1479 aa30.75■■■□□ 2.51
SUMO3-204ENST00000411651 GAPVD1Q14C86 1478 aa30.74■■■□□ 2.51
SUMO3-204ENST00000411651 EFCAB5A4FU69 1503 aa30.73■■■□□ 2.51
SUMO3-204ENST00000411651 CTTNBP2Q8WZ74 1663 aa30.71■■■□□ 2.51
SUMO3-204ENST00000411651 FHAD1B1AJZ9 1412 aa30.67■■■□□ 2.5
SUMO3-204ENST00000411651 TDRD9Q8NDG6 1382 aaKnown RBP30.62■■■□□ 2.49
SUMO3-204ENST00000411651 CCER1Q8TC90 406 aaPredicted RBP30.61■■■□□ 2.49
SUMO3-204ENST00000411651 WDR62O43379 1518 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms