RNA–Protein interactions for RNA: ENST00000296181.8

ITGB5-201, Transcript of integrin subunit beta 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB5, Length 4,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-201ENST00000296181 NISCHQ9Y2I1 1504 aa32.65■■■□□ 2.82
ITGB5-201ENST00000296181 DCAF8L2P0C7V8 631 aa31.57■■■□□ 2.64
ITGB5-201ENST00000296181 SUPT5HO00267 1087 aaKnown RBP31.15■■■□□ 2.58
ITGB5-201ENST00000296181 SHROOM4Q9ULL8 1493 aa30.79■■■□□ 2.52
ITGB5-201ENST00000296181 PCGF6Q9BYE7 350 aa29.9■■■□□ 2.38
ITGB5-201ENST00000296181 EHMT2Q96KQ7 1210 aa29.76■■■□□ 2.35
ITGB5-201ENST00000296181 FAM9AQ8IZU1 332 aaPredicted RBP29.22■■■□□ 2.27
ITGB5-201ENST00000296181 HRCP23327 699 aa29.06■■■□□ 2.24
ITGB5-201ENST00000296181 TTBK1Q5TCY1 1321 aaPredicted RBP28.83■■■□□ 2.21
ITGB5-201ENST00000296181 PPARGC1BQ86YN6 1023 aaKnown RBP28.8■■■□□ 2.2
ITGB5-201ENST00000296181 CHIC1Q5VXU3 224 aa28.73■■■□□ 2.19
ITGB5-201ENST00000296181 LOC105371045A0A1W2PR82 267 aa28.67■■■□□ 2.18
ITGB5-201ENST00000296181 ZEB1P37275 1124 aaPredicted RBP28.64■■■□□ 2.18
ITGB5-201ENST00000296181 TRIM41Q8WV44 630 aa28.63■■■□□ 2.17
ITGB5-201ENST00000296181 CCER1Q8TC90 406 aaPredicted RBP28.5■■■□□ 2.15
ITGB5-201ENST00000296181 TRIM26Q12899 539 aaPredicted RBP28.48■■■□□ 2.15
ITGB5-201ENST00000296181 PELP1Q8IZL8 1130 aaKnown RBP28.43■■■□□ 2.14
ITGB5-201ENST00000296181 CENPBP07199 599 aaPredicted RBP28.35■■■□□ 2.13
ITGB5-201ENST00000296181 APLP2Q06481 763 aa28.19■■■□□ 2.1
ITGB5-201ENST00000296181 YTHDC1Q96MU7 727 aaKnown RBP28.11■■■□□ 2.09
ITGB5-201ENST00000296181 RANGAP1P46060 587 aaPredicted RBP28.04■■■□□ 2.08
ITGB5-201ENST00000296181 UBTFP17480 764 aaKnown RBP27.88■■■□□ 2.05
ITGB5-201ENST00000296181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.76■■■□□ 2.03
ITGB5-201ENST00000296181 MYT1Q01538 1121 aa27.51■■■□□ 2
ITGB5-201ENST00000296181 DIEXFQ68CQ4 756 aaKnown RBP27.51■■■□□ 2
ITGB5-201ENST00000296181 HNRNPUL2Q1KMD3 747 aaKnown RBP27.42■■□□□ 1.98
ITGB5-201ENST00000296181 GTF3C3Q9Y5Q9 886 aa27.37■■□□□ 1.97
ITGB5-201ENST00000296181 ABCC9O60706 1549 aa27.31■■□□□ 1.96
ITGB5-201ENST00000296181 MYO15BQ96JP2 1530 aa27.26■■□□□ 1.95
ITGB5-201ENST00000296181 ATP1B4Q9UN42 357 aaPredicted RBP27.23■■□□□ 1.95
ITGB5-201ENST00000296181 ZCCHC6Q5VYS8 1495 aaKnown RBP27.22■■□□□ 1.95
ITGB5-201ENST00000296181 ERICH6Q7L0X2 663 aa27.16■■□□□ 1.94
ITGB5-201ENST00000296181 ACIN1Q9UKV3 1341 aaKnown RBP27.12■■□□□ 1.93
ITGB5-201ENST00000296181 ITGAEP38570 1179 aa27.12■■□□□ 1.93
ITGB5-201ENST00000296181 NEFLP07196 543 aa27.11■■□□□ 1.93
ITGB5-201ENST00000296181 DCAF1Q9Y4B6 1507 aa27.05■■□□□ 1.92
ITGB5-201ENST00000296181 PABPN1Q86U42 306 aaKnown RBP eCLIP27.02■■□□□ 1.92
ITGB5-201ENST00000296181 SCAF1Q9H7N4 1312 aaKnown RBP27.01■■□□□ 1.91
ITGB5-201ENST00000296181 NEUROD1Q13562 356 aa26.87■■□□□ 1.89
ITGB5-201ENST00000296181 ZNF316A6NFI3 1004 aaPredicted RBP26.84■■□□□ 1.89
ITGB5-201ENST00000296181 SCRIBQ14160 1630 aa26.68■■□□□ 1.86
ITGB5-201ENST00000296181 BCANQ96GW7 911 aa26.66■■□□□ 1.86
ITGB5-201ENST00000296181 CCDC180Q9P1Z9 1646 aa26.63■■□□□ 1.85
ITGB5-201ENST00000296181 CNGB1Q14028 1251 aaPredicted RBP26.47■■□□□ 1.83
ITGB5-201ENST00000296181 CSRNP3Q8WYN3 585 aa26.45■■□□□ 1.83
ITGB5-201ENST00000296181 POLR3GLQ9BT43 218 aa26.34■■□□□ 1.81
ITGB5-201ENST00000296181 MIER1Q8N108 512 aa26.32■■□□□ 1.8
ITGB5-201ENST00000296181 FAM50AQ14320 339 aaKnown RBP26.31■■□□□ 1.8
ITGB5-201ENST00000296181 RSF1Q96T23 1441 aaPredicted RBP26.27■■□□□ 1.8
ITGB5-201ENST00000296181 ANP32CO43423 234 aa26.08■■□□□ 1.77
ITGB5-201ENST00000296181 FKBP8Q14318 412 aa26.04■■□□□ 1.76
ITGB5-201ENST00000296181 DDX10Q13206 875 aaKnown RBP25.95■■□□□ 1.74
ITGB5-201ENST00000296181 P3H3Q8IVL6 736 aa25.93■■□□□ 1.74
ITGB5-201ENST00000296181 CDK11AQ9UQ88 783 aaPredicted RBP25.92■■□□□ 1.74
ITGB5-201ENST00000296181 CECR2Q9BXF3 1484 aa25.9■■□□□ 1.74
ITGB5-201ENST00000296181 TRIM52Q96A61 297 aa25.89■■□□□ 1.74
ITGB5-201ENST00000296181 RTL5Q5HYW3 569 aaPredicted RBP25.82■■□□□ 1.72
ITGB5-201ENST00000296181 CEP162Q5TB80 1403 aa25.82■■□□□ 1.72
ITGB5-201ENST00000296181 DAXXQ9UER7 740 aaPredicted RBP25.81■■□□□ 1.72
ITGB5-201ENST00000296181 CLSPNQ9HAW4 1339 aa25.79■■□□□ 1.72
ITGB5-201ENST00000296181 HIRIP3Q9BW71 556 aaPredicted RBP25.76■■□□□ 1.71
ITGB5-201ENST00000296181 ZNF326Q5BKZ1 582 aaKnown RBP25.67■■□□□ 1.7
ITGB5-201ENST00000296181 HNRNPUQ00839 825 aaKnown RBP eCLIP25.66■■□□□ 1.7
ITGB5-201ENST00000296181 CLIP1P30622 1438 aa25.65■■□□□ 1.7
ITGB5-201ENST00000296181 ARID3CA6NKF2 412 aa25.64■■□□□ 1.69
ITGB5-201ENST00000296181 RB1CC1Q8TDY2 1594 aa25.63■■□□□ 1.69
ITGB5-201ENST00000296181 IRX6P78412 446 aaPredicted RBP25.58■■□□□ 1.69
ITGB5-201ENST00000296181 NACADO15069 1562 aa25.57■■□□□ 1.68
ITGB5-201ENST00000296181 SUPT16HQ9Y5B9 1047 aaKnown RBP25.53■■□□□ 1.68
ITGB5-201ENST00000296181 TNIKQ9UKE5 1360 aa25.53■■□□□ 1.68
ITGB5-201ENST00000296181 MROH2BQ7Z745 1585 aa25.53■■□□□ 1.68
ITGB5-201ENST00000296181 TONSLQ96HA7 1378 aa25.49■■□□□ 1.67
ITGB5-201ENST00000296181 FAM9BQ8IZU0 186 aa25.48■■□□□ 1.67
ITGB5-201ENST00000296181 ANP32EQ9BTT0 268 aa25.45■■□□□ 1.67
ITGB5-201ENST00000296181 GOLGA3Q08378 1498 aa25.44■■□□□ 1.66
ITGB5-201ENST00000296181 SOGA1O94964 1423 aa25.42■■□□□ 1.66
ITGB5-201ENST00000296181 WRNQ14191 1432 aaPredicted RBP eCLIP25.42■■□□□ 1.66
ITGB5-201ENST00000296181 NPM2Q86SE8 214 aaKnown RBP25.38■■□□□ 1.65
ITGB5-201ENST00000296181 FBLN2P98095 1184 aa25.37■■□□□ 1.65
ITGB5-201ENST00000296181 MYT1LQ9UL68 1186 aa25.35■■□□□ 1.65
ITGB5-201ENST00000296181 EEA1Q15075 1411 aa25.35■■□□□ 1.65
ITGB5-201ENST00000296181 ANP32AP39687 249 aaKnown RBP25.35■■□□□ 1.65
ITGB5-201ENST00000296181 BAZ1AQ9NRL2 1556 aaPredicted RBP25.34■■□□□ 1.65
ITGB5-201ENST00000296181 NBR1Q14596 966 aa25.33■■□□□ 1.64
ITGB5-201ENST00000296181 SIN3AQ96ST3 1273 aa25.29■■□□□ 1.64
ITGB5-201ENST00000296181 CHIC2Q9UKJ5 165 aa25.29■■□□□ 1.64
ITGB5-201ENST00000296181 ABCC8Q09428 1581 aa25.29■■□□□ 1.64
ITGB5-201ENST00000296181 CCDC88BA6NC98 1476 aa25.25■■□□□ 1.63
ITGB5-201ENST00000296181 SALL2Q9Y467 1007 aaPredicted RBP25.22■■□□□ 1.63
ITGB5-201ENST00000296181 MRS2Q9HD23 443 aa25.22■■□□□ 1.63
ITGB5-201ENST00000296181 SLC4A1APQ9BWU0 796 aaKnown RBP25.2■■□□□ 1.62
ITGB5-201ENST00000296181 BAZ1BQ9UIG0 1483 aaKnown RBP25.19■■□□□ 1.62
ITGB5-201ENST00000296181 SENP3-EIF4A1A0A087X0R7 540 aa25.19■■□□□ 1.62
ITGB5-201ENST00000296181 WIZO95785 1651 aa25.19■■□□□ 1.62
ITGB5-201ENST00000296181 CCDC136Q96JN2 1154 aa25.16■■□□□ 1.62
ITGB5-201ENST00000296181 CEP164Q9UPV0 1460 aa25.15■■□□□ 1.62
ITGB5-201ENST00000296181 ZNF777Q9ULD5 760 aaPredicted RBP25.11■■□□□ 1.61
ITGB5-201ENST00000296181 TSHZ2Q9NRE2 1034 aa25.11■■□□□ 1.61
ITGB5-201ENST00000296181 KANK4Q5T7N3 995 aaPredicted RBP25.07■■□□□ 1.6
ITGB5-201ENST00000296181 ZBTB47Q9UFB7 747 aaPredicted RBP25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms