RNA–Protein interactions for RNA: ENST00000571281.1

NXN-204, Transcript of nucleoredoxin, humanhuman

TSL 1 (best)

Gene NXN, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXN-204ENST00000571281 NISCHQ9Y2I1 1504 aa39.27■■■■□ 3.88
NXN-204ENST00000571281 ABCC9O60706 1549 aa36.03■■■■□ 3.36
NXN-204ENST00000571281 CCDC180Q9P1Z9 1646 aa35.54■■■■□ 3.28
NXN-204ENST00000571281 DNAJC5BQ9UF47 199 aa34.41■■■■□ 3.1
NXN-204ENST00000571281 RB1CC1Q8TDY2 1594 aa34.06■■■■□ 3.04
NXN-204ENST00000571281 NACADO15069 1562 aa33.72■■■□□ 2.99
NXN-204ENST00000571281 PABPN1Q86U42 306 aaKnown RBP eCLIP33.38■■■□□ 2.93
NXN-204ENST00000571281 UNC13AQ9UPW8 1703 aa33.36■■■□□ 2.93
NXN-204ENST00000571281 BICRAQ9NZM4 1560 aa33.21■■■□□ 2.91
NXN-204ENST00000571281 MYO15BQ96JP2 1530 aa33.14■■■□□ 2.9
NXN-204ENST00000571281 DCAF8L2P0C7V8 631 aa33.08■■■□□ 2.89
NXN-204ENST00000571281 SHROOM4Q9ULL8 1493 aa32.69■■■□□ 2.82
NXN-204ENST00000571281 CC2D2AQ9P2K1 1620 aa32.57■■■□□ 2.8
NXN-204ENST00000571281 CECR2Q9BXF3 1484 aa32.54■■■□□ 2.8
NXN-204ENST00000571281 DCAF1Q9Y4B6 1507 aa32.47■■■□□ 2.79
NXN-204ENST00000571281 ZCCHC6Q5VYS8 1495 aaKnown RBP32.46■■■□□ 2.79
NXN-204ENST00000571281 EIF4G1Q04637 1599 aaKnown RBP32.37■■■□□ 2.77
NXN-204ENST00000571281 SCRIBQ14160 1630 aa32.26■■■□□ 2.75
NXN-204ENST00000571281 DNAJC5Q9H3Z4 198 aa32.01■■■□□ 2.71
NXN-204ENST00000571281 CUX2O14529 1486 aa31.37■■■□□ 2.61
NXN-204ENST00000571281 NCAPD3P42695 1498 aa31.15■■■□□ 2.58
NXN-204ENST00000571281 ERCC6Q03468 1493 aa31.09■■■□□ 2.57
NXN-204ENST00000571281 ATAD2BQ9ULI0 1458 aa30.95■■■□□ 2.55
NXN-204ENST00000571281 HMGXB3Q12766 1538 aa30.88■■■□□ 2.53
NXN-204ENST00000571281 NESP48681 1621 aa30.82■■■□□ 2.52
NXN-204ENST00000571281 SMARCA2P51531 1590 aa30.81■■■□□ 2.52
NXN-204ENST00000571281 SMARCA4P51532 1647 aa30.77■■■□□ 2.52
NXN-204ENST00000571281 THOC2Q8NI27 1593 aaKnown RBP30.71■■■□□ 2.51
NXN-204ENST00000571281 PEG3Q9GZU2 1588 aa30.56■■■□□ 2.48
NXN-204ENST00000571281 BAZ1BQ9UIG0 1483 aaKnown RBP30.56■■■□□ 2.48
NXN-204ENST00000571281 LAMC3Q9Y6N6 1575 aa30.52■■■□□ 2.48
NXN-204ENST00000571281 BAZ1AQ9NRL2 1556 aaPredicted RBP30.49■■■□□ 2.47
NXN-204ENST00000571281 KIF21AQ7Z4S6 1674 aa30.42■■■□□ 2.46
NXN-204ENST00000571281 PDS5BQ9NTI5 1447 aa30.3■■■□□ 2.44
NXN-204ENST00000571281 MROH2BQ7Z745 1585 aa30.25■■■□□ 2.43
NXN-204ENST00000571281 TRIM41Q8WV44 630 aa30.18■■■□□ 2.42
NXN-204ENST00000571281 WDR62O43379 1518 aa30.13■■■□□ 2.41
NXN-204ENST00000571281 MRC2Q9UBG0 1479 aa30.12■■■□□ 2.41
NXN-204ENST00000571281 CADPSQ9ULU8 1353 aa30.12■■■□□ 2.41
NXN-204ENST00000571281 CEP164Q9UPV0 1460 aa29.85■■■□□ 2.37
NXN-204ENST00000571281 WIZO95785 1651 aa29.82■■■□□ 2.36
NXN-204ENST00000571281 FANCD2Q9BXW9 1451 aa29.77■■■□□ 2.36
NXN-204ENST00000571281 CFTRP13569 1480 aa29.7■■■□□ 2.35
NXN-204ENST00000571281 OSCARQ8IYS5 282 aa29.7■■■□□ 2.35
NXN-204ENST00000571281 URB2Q14146 1524 aaKnown RBP29.63■■■□□ 2.33
NXN-204ENST00000571281 RIMBP3CA6NJZ7 1639 aa29.51■■■□□ 2.31
NXN-204ENST00000571281 RIMBP3BA6NNM3 1639 aa29.51■■■□□ 2.31
NXN-204ENST00000571281 RIMBP3Q9UFD9 1639 aa29.51■■■□□ 2.31
NXN-204ENST00000571281 TOP2AP11388 1531 aaKnown RBP29.44■■■□□ 2.3
NXN-204ENST00000571281 RSF1Q96T23 1441 aaPredicted RBP29.39■■■□□ 2.3
NXN-204ENST00000571281 ARHGEF11O15085 1522 aa29.35■■■□□ 2.29
NXN-204ENST00000571281 PRDM2Q13029 1718 aa29.35■■■□□ 2.29
NXN-204ENST00000571281 ZNF608Q9ULD9 1512 aaPredicted RBP29.34■■■□□ 2.29
NXN-204ENST00000571281 IFT140Q96RY7 1462 aa29.3■■■□□ 2.28
NXN-204ENST00000571281 TOPBP1Q92547 1522 aa29.17■■■□□ 2.26
NXN-204ENST00000571281 EIF4G3O43432 1585 aaKnown RBP29.15■■■□□ 2.26
NXN-204ENST00000571281 CCDC88BA6NC98 1476 aa29.08■■■□□ 2.25
NXN-204ENST00000571281 ARAP1Q96P48 1450 aa29.05■■■□□ 2.24
NXN-204ENST00000571281 CHD1O14646 1710 aa29.03■■■□□ 2.24
NXN-204ENST00000571281 CYB5RLQ6IPT4 315 aa29.02■■■□□ 2.24
NXN-204ENST00000571281 TARBP1Q13395 1621 aaKnown RBP29.02■■■□□ 2.24
NXN-204ENST00000571281 ABCC8Q09428 1581 aa29.01■■■□□ 2.24
NXN-204ENST00000571281 DNMBPQ6XZF7 1577 aa29.01■■■□□ 2.24
NXN-204ENST00000571281 AQRO60306 1485 aaKnown RBP eCLIP28.94■■■□□ 2.22
NXN-204ENST00000571281 POLA1P09884 1462 aaPredicted RBP28.85■■■□□ 2.21
NXN-204ENST00000571281 TRHP20396 242 aaPredicted RBP28.81■■■□□ 2.2
NXN-204ENST00000571281 CLASP1Q7Z460 1538 aa28.76■■■□□ 2.19
NXN-204ENST00000571281 RAD54L2Q9Y4B4 1467 aa28.71■■■□□ 2.19
NXN-204ENST00000571281 FBLN2P98095 1184 aa28.69■■■□□ 2.18
NXN-204ENST00000571281 WDR97A6NE52 1622 aa28.67■■■□□ 2.18
NXN-204ENST00000571281 SNAPC4Q5SXM2 1469 aa28.66■■■□□ 2.18
NXN-204ENST00000571281 TDRD9Q8NDG6 1382 aaKnown RBP28.63■■■□□ 2.17
NXN-204ENST00000571281 SOGA1O94964 1423 aa28.61■■■□□ 2.17
NXN-204ENST00000571281 SYNJ1O43426 1573 aa28.58■■■□□ 2.17
NXN-204ENST00000571281 MAGI1Q96QZ7 1491 aaPredicted RBP28.58■■■□□ 2.17
NXN-204ENST00000571281 FGD5Q6ZNL6 1462 aa28.54■■■□□ 2.16
NXN-204ENST00000571281 GRIN2BQ13224 1484 aa28.48■■■□□ 2.15
NXN-204ENST00000571281 SYNJ2O15056 1496 aa28.47■■■□□ 2.15
NXN-204ENST00000571281 CUX1P39880 1505 aa28.47■■■□□ 2.15
NXN-204ENST00000571281 CHMP7Q8WUX9 453 aaPredicted RBP28.44■■■□□ 2.14
NXN-204ENST00000571281 GAPVD1Q14C86 1478 aa28.4■■■□□ 2.14
NXN-204ENST00000571281 AEBP2Q6ZN18 517 aaPredicted RBP28.39■■■□□ 2.14
NXN-204ENST00000571281 PBRM1Q86U86 1689 aa28.35■■■□□ 2.13
NXN-204ENST00000571281 ABCA5Q8WWZ7 1642 aa28.27■■■□□ 2.12
NXN-204ENST00000571281 ERCC6L2Q5T890 1561 aa28.24■■■□□ 2.11
NXN-204ENST00000571281 ABCA10Q8WWZ4 1543 aa28.23■■■□□ 2.11
NXN-204ENST00000571281 GRIN2AQ12879 1464 aa28.14■■■□□ 2.09
NXN-204ENST00000571281 NUP160Q12769 1436 aa28.12■■■□□ 2.09
NXN-204ENST00000571281 CEP170Q5SW79 1584 aa28.11■■■□□ 2.09
NXN-204ENST00000571281 SHROOM2Q13796 1616 aa28.09■■■□□ 2.09
NXN-204ENST00000571281 ADAMTS12P58397 1594 aa28.08■■■□□ 2.09
NXN-204ENST00000571281 KIF13AQ9H1H9 1805 aa28.02■■■□□ 2.08
NXN-204ENST00000571281 FHAD1B1AJZ9 1412 aa27.92■■■□□ 2.06
NXN-204ENST00000571281 WRNQ14191 1432 aaPredicted RBP eCLIP27.91■■■□□ 2.06
NXN-204ENST00000571281 BIVM-ERCC5R4GMW8 1640 aa27.85■■■□□ 2.05
NXN-204ENST00000571281 ERICH3Q5RHP9 1530 aa27.84■■■□□ 2.05
NXN-204ENST00000571281 TOP2BQ02880 1626 aa27.83■■■□□ 2.05
NXN-204ENST00000571281 PRG4Q92954 1404 aaPredicted RBP27.79■■■□□ 2.04
NXN-204ENST00000571281 ABCC10Q5T3U5 1492 aa27.77■■■□□ 2.04
NXN-204ENST00000571281 MAPKBP1O60336 1514 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms