RNA–Protein interactions for RNA: ENST00000278222.6

SAA4-201, Transcript of serum amyloid A4, constitutive, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAA4, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4-201ENST00000278222 NISCHQ9Y2I1 1504 aa25.84■■□□□ 1.73
SAA4-201ENST00000278222 CCDC180Q9P1Z9 1646 aa22.88■■□□□ 1.25
SAA4-201ENST00000278222 ABCC9O60706 1549 aa21.81■■□□□ 1.08
SAA4-201ENST00000278222 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.05
SAA4-201ENST00000278222 DCAF1Q9Y4B6 1507 aa21.53■■□□□ 1.04
SAA4-201ENST00000278222 MYO15BQ96JP2 1530 aa21.51■■□□□ 1.03
SAA4-201ENST00000278222 NACADO15069 1562 aa21.4■■□□□ 1.02
SAA4-201ENST00000278222 RB1CC1Q8TDY2 1594 aa21.3■■□□□ 1
SAA4-201ENST00000278222 DCAF8L2P0C7V8 631 aa21.17■□□□□ 0.98
SAA4-201ENST00000278222 SCRIBQ14160 1630 aa20.74■□□□□ 0.91
SAA4-201ENST00000278222 UNC13AQ9UPW8 1703 aa20.72■□□□□ 0.91
SAA4-201ENST00000278222 SHROOM4Q9ULL8 1493 aa20.62■□□□□ 0.89
SAA4-201ENST00000278222 BICRAQ9NZM4 1560 aa20.59■□□□□ 0.89
SAA4-201ENST00000278222 PABPN1Q86U42 306 aaKnown RBP eCLIP20.38■□□□□ 0.85
SAA4-201ENST00000278222 AEBP2Q6ZN18 517 aaPredicted RBP20.2■□□□□ 0.82
SAA4-201ENST00000278222 CHIC1Q5VXU3 224 aa20.11■□□□□ 0.81
SAA4-201ENST00000278222 DNAJC5BQ9UF47 199 aa20.1■□□□□ 0.81
SAA4-201ENST00000278222 EIF4G1Q04637 1599 aaKnown RBP20.04■□□□□ 0.8
SAA4-201ENST00000278222 BAZ1AQ9NRL2 1556 aaPredicted RBP20.03■□□□□ 0.8
SAA4-201ENST00000278222 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
SAA4-201ENST00000278222 SMARCA4P51532 1647 aa19.95■□□□□ 0.78
SAA4-201ENST00000278222 PEG3Q9GZU2 1588 aa19.86■□□□□ 0.77
SAA4-201ENST00000278222 MROH2BQ7Z745 1585 aa19.85■□□□□ 0.77
SAA4-201ENST00000278222 CC2D2AQ9P2K1 1620 aa19.81■□□□□ 0.76
SAA4-201ENST00000278222 SMARCA2P51531 1590 aa19.8■□□□□ 0.76
SAA4-201ENST00000278222 RSF1Q96T23 1441 aaPredicted RBP19.8■□□□□ 0.76
SAA4-201ENST00000278222 ATAD2BQ9ULI0 1458 aa19.75■□□□□ 0.75
SAA4-201ENST00000278222 NCAPD3P42695 1498 aa19.73■□□□□ 0.75
SAA4-201ENST00000278222 HMGXB3Q12766 1538 aa19.7■□□□□ 0.74
SAA4-201ENST00000278222 WIZO95785 1651 aa19.62■□□□□ 0.73
SAA4-201ENST00000278222 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
SAA4-201ENST00000278222 TOP2AP11388 1531 aaKnown RBP19.56■□□□□ 0.72
SAA4-201ENST00000278222 SUPT5HO00267 1087 aaKnown RBP19.4■□□□□ 0.7
SAA4-201ENST00000278222 CCDC88BA6NC98 1476 aa19.25■□□□□ 0.67
SAA4-201ENST00000278222 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
SAA4-201ENST00000278222 CADPSQ9ULU8 1353 aa19.13■□□□□ 0.65
SAA4-201ENST00000278222 CFTRP13569 1480 aa19.13■□□□□ 0.65
SAA4-201ENST00000278222 PRDM2Q13029 1718 aa19.01■□□□□ 0.63
SAA4-201ENST00000278222 PDS5BQ9NTI5 1447 aa19■□□□□ 0.63
SAA4-201ENST00000278222 NESP48681 1621 aa18.98■□□□□ 0.63
SAA4-201ENST00000278222 FANCD2Q9BXW9 1451 aa18.89■□□□□ 0.61
SAA4-201ENST00000278222 CEP164Q9UPV0 1460 aa18.85■□□□□ 0.61
SAA4-201ENST00000278222 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
SAA4-201ENST00000278222 KIF21AQ7Z4S6 1674 aa18.81■□□□□ 0.6
SAA4-201ENST00000278222 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
SAA4-201ENST00000278222 MRC2Q9UBG0 1479 aa18.75■□□□□ 0.59
SAA4-201ENST00000278222 THOC2Q8NI27 1593 aaKnown RBP18.72■□□□□ 0.59
SAA4-201ENST00000278222 WDR62O43379 1518 aa18.71■□□□□ 0.59
SAA4-201ENST00000278222 DNMBPQ6XZF7 1577 aa18.68■□□□□ 0.58
SAA4-201ENST00000278222 WRNQ14191 1432 aaPredicted RBP eCLIP18.66■□□□□ 0.58
SAA4-201ENST00000278222 URB2Q14146 1524 aaKnown RBP18.66■□□□□ 0.58
SAA4-201ENST00000278222 TOPBP1Q92547 1522 aa18.64■□□□□ 0.57
SAA4-201ENST00000278222 TOP2BQ02880 1626 aa18.62■□□□□ 0.57
SAA4-201ENST00000278222 BIVM-ERCC5R4GMW8 1640 aa18.62■□□□□ 0.57
SAA4-201ENST00000278222 CUX1P39880 1505 aa18.61■□□□□ 0.57
SAA4-201ENST00000278222 DNAJC5Q9H3Z4 198 aa18.61■□□□□ 0.57
SAA4-201ENST00000278222 CUX2O14529 1486 aa18.6■□□□□ 0.57
SAA4-201ENST00000278222 SYNJ1O43426 1573 aa18.56■□□□□ 0.56
SAA4-201ENST00000278222 POLA1P09884 1462 aaPredicted RBP18.51■□□□□ 0.55
SAA4-201ENST00000278222 FGD5Q6ZNL6 1462 aa18.5■□□□□ 0.55
SAA4-201ENST00000278222 IFT140Q96RY7 1462 aa18.47■□□□□ 0.55
SAA4-201ENST00000278222 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
SAA4-201ENST00000278222 TARBP1Q13395 1621 aaKnown RBP18.41■□□□□ 0.54
SAA4-201ENST00000278222 SOGA1O94964 1423 aa18.41■□□□□ 0.54
SAA4-201ENST00000278222 ABCA10Q8WWZ4 1543 aa18.4■□□□□ 0.54
SAA4-201ENST00000278222 TRIM41Q8WV44 630 aa18.4■□□□□ 0.54
SAA4-201ENST00000278222 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.53
SAA4-201ENST00000278222 ABCA5Q8WWZ7 1642 aa18.28■□□□□ 0.52
SAA4-201ENST00000278222 KIF27Q86VH2 1401 aa18.27■□□□□ 0.52
SAA4-201ENST00000278222 EIF4G3O43432 1585 aaKnown RBP18.25■□□□□ 0.51
SAA4-201ENST00000278222 EEA1Q15075 1411 aa18.25■□□□□ 0.51
SAA4-201ENST00000278222 ZNF608Q9ULD9 1512 aaPredicted RBP18.24■□□□□ 0.51
SAA4-201ENST00000278222 GAPVD1Q14C86 1478 aa18.23■□□□□ 0.51
SAA4-201ENST00000278222 ERICH3Q5RHP9 1530 aa18.21■□□□□ 0.51
SAA4-201ENST00000278222 GRIN2BQ13224 1484 aa18.2■□□□□ 0.5
SAA4-201ENST00000278222 TDRD9Q8NDG6 1382 aaKnown RBP18.2■□□□□ 0.5
SAA4-201ENST00000278222 AQRO60306 1485 aaKnown RBP eCLIP18.18■□□□□ 0.52e-7■■■■■ 29.4
SAA4-201ENST00000278222 MAGI1Q96QZ7 1491 aaPredicted RBP18.15■□□□□ 0.5
SAA4-201ENST00000278222 PBRM1Q86U86 1689 aa18.15■□□□□ 0.5
SAA4-201ENST00000278222 IGF1RP08069 1367 aa18.11■□□□□ 0.49
SAA4-201ENST00000278222 CUL7Q14999 1698 aa18.11■□□□□ 0.49
SAA4-201ENST00000278222 RUSC2Q8N2Y8 1516 aa18.08■□□□□ 0.48
SAA4-201ENST00000278222 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
SAA4-201ENST00000278222 ADAMTS12P58397 1594 aa18.07■□□□□ 0.48
SAA4-201ENST00000278222 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
SAA4-201ENST00000278222 SYNJ2O15056 1496 aa18.05■□□□□ 0.48
SAA4-201ENST00000278222 PRXQ9BXM0 1461 aa18.03■□□□□ 0.48
SAA4-201ENST00000278222 CSRNP3Q8WYN3 585 aa18.03■□□□□ 0.48
SAA4-201ENST00000278222 CARMIL1Q5VZK9 1371 aa18.01■□□□□ 0.47
SAA4-201ENST00000278222 KIF21BO75037 1637 aa17.98■□□□□ 0.47
SAA4-201ENST00000278222 RAPGEF2Q9Y4G8 1499 aa17.97■□□□□ 0.47
SAA4-201ENST00000278222 GRIN2AQ12879 1464 aa17.95■□□□□ 0.46
SAA4-201ENST00000278222 CHMP7Q8WUX9 453 aaPredicted RBP17.91■□□□□ 0.46
SAA4-201ENST00000278222 NUP160Q12769 1436 aa17.89■□□□□ 0.46
SAA4-201ENST00000278222 CHD1O14646 1710 aa17.89■□□□□ 0.46
SAA4-201ENST00000278222 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
SAA4-201ENST00000278222 FAM9AQ8IZU1 332 aaPredicted RBP17.87■□□□□ 0.45
SAA4-201ENST00000278222 CEP170Q5SW79 1584 aa17.82■□□□□ 0.44
SAA4-201ENST00000278222 FBLN2P98095 1184 aa17.81■□□□□ 0.44
SAA4-201ENST00000278222 KIAA0586Q9BVV6 1533 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms