RNA–Protein interactions for RNA: ENST00000586439.1

POLR2I-203, Transcript of RNA polymerase II subunit I, humanhuman

TSL 5

Gene POLR2I, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2I-203ENST00000586439 NISCHQ9Y2I1 1504 aa47.78■■■■■ 5.24
POLR2I-203ENST00000586439 ABCC9O60706 1549 aa42.89■■■■■ 4.46
POLR2I-203ENST00000586439 CCDC180Q9P1Z9 1646 aa42.83■■■■■ 4.45
POLR2I-203ENST00000586439 RB1CC1Q8TDY2 1594 aa40.77■■■■■ 4.12
POLR2I-203ENST00000586439 NACADO15069 1562 aa40.49■■■■■ 4.07
POLR2I-203ENST00000586439 DCAF8L2P0C7V8 631 aa40.46■■■■■ 4.07
POLR2I-203ENST00000586439 DNAJC5BQ9UF47 199 aa40.28■■■■■ 4.04
POLR2I-203ENST00000586439 PABPN1Q86U42 306 aaKnown RBP eCLIP39.99■■■■□ 3.99
POLR2I-203ENST00000586439 UNC13AQ9UPW8 1703 aa39.96■■■■□ 3.99
POLR2I-203ENST00000586439 MYO15BQ96JP2 1530 aa39.89■■■■□ 3.98
POLR2I-203ENST00000586439 BICRAQ9NZM4 1560 aa39.63■■■■□ 3.93
POLR2I-203ENST00000586439 ZCCHC6Q5VYS8 1495 aaKnown RBP39.57■■■■□ 3.93
POLR2I-203ENST00000586439 DCAF1Q9Y4B6 1507 aa39.41■■■■□ 3.9
POLR2I-203ENST00000586439 SCRIBQ14160 1630 aa39.1■■■■□ 3.85
POLR2I-203ENST00000586439 SHROOM4Q9ULL8 1493 aa38.95■■■■□ 3.83
POLR2I-203ENST00000586439 CC2D2AQ9P2K1 1620 aa38.74■■■■□ 3.79
POLR2I-203ENST00000586439 EIF4G1Q04637 1599 aaKnown RBP38.63■■■■□ 3.77
POLR2I-203ENST00000586439 CECR2Q9BXF3 1484 aa38.6■■■■□ 3.77
POLR2I-203ENST00000586439 NCAPD3P42695 1498 aa37.39■■■■□ 3.58
POLR2I-203ENST00000586439 ATAD2BQ9ULI0 1458 aa37.3■■■■□ 3.56
POLR2I-203ENST00000586439 SMARCA4P51532 1647 aa37.28■■■■□ 3.56
POLR2I-203ENST00000586439 SMARCA2P51531 1590 aa37.17■■■■□ 3.54
POLR2I-203ENST00000586439 HMGXB3Q12766 1538 aa37.08■■■■□ 3.53
POLR2I-203ENST00000586439 BAZ1AQ9NRL2 1556 aaPredicted RBP37.06■■■■□ 3.52
POLR2I-203ENST00000586439 ERCC6Q03468 1493 aa36.99■■■■□ 3.51
POLR2I-203ENST00000586439 BAZ1BQ9UIG0 1483 aaKnown RBP36.93■■■■□ 3.5
POLR2I-203ENST00000586439 DNAJC5Q9H3Z4 198 aa36.91■■■■□ 3.5
POLR2I-203ENST00000586439 NESP48681 1621 aa36.87■■■■□ 3.49
POLR2I-203ENST00000586439 CUX2O14529 1486 aa36.87■■■■□ 3.49
POLR2I-203ENST00000586439 PEG3Q9GZU2 1588 aa36.87■■■■□ 3.49
POLR2I-203ENST00000586439 MROH2BQ7Z745 1585 aa36.85■■■■□ 3.49
POLR2I-203ENST00000586439 LAMC3Q9Y6N6 1575 aa36.53■■■■□ 3.44
POLR2I-203ENST00000586439 WIZO95785 1651 aa36.45■■■■□ 3.42
POLR2I-203ENST00000586439 THOC2Q8NI27 1593 aaKnown RBP36.43■■■■□ 3.42
POLR2I-203ENST00000586439 KIF21AQ7Z4S6 1674 aa36.39■■■■□ 3.42
POLR2I-203ENST00000586439 PDS5BQ9NTI5 1447 aa36.34■■■■□ 3.41
POLR2I-203ENST00000586439 CADPSQ9ULU8 1353 aa36.27■■■■□ 3.4
POLR2I-203ENST00000586439 RSF1Q96T23 1441 aaPredicted RBP36.08■■■■□ 3.37
POLR2I-203ENST00000586439 MRC2Q9UBG0 1479 aa36.02■■■■□ 3.36
POLR2I-203ENST00000586439 WDR62O43379 1518 aa35.93■■■■□ 3.34
POLR2I-203ENST00000586439 TOP2AP11388 1531 aaKnown RBP35.9■■■■□ 3.34
POLR2I-203ENST00000586439 CEP164Q9UPV0 1460 aa35.88■■■■□ 3.33
POLR2I-203ENST00000586439 FANCD2Q9BXW9 1451 aa35.86■■■■□ 3.33
POLR2I-203ENST00000586439 CFTRP13569 1480 aa35.85■■■■□ 3.33
POLR2I-203ENST00000586439 URB2Q14146 1524 aaKnown RBP35.58■■■■□ 3.29
POLR2I-203ENST00000586439 CCDC88BA6NC98 1476 aa35.55■■■■□ 3.28
POLR2I-203ENST00000586439 PRDM2Q13029 1718 aa35.53■■■■□ 3.28
POLR2I-203ENST00000586439 TRIM41Q8WV44 630 aa35.35■■■■□ 3.25
POLR2I-203ENST00000586439 OSCARQ8IYS5 282 aa35.28■■■■□ 3.24
POLR2I-203ENST00000586439 TOPBP1Q92547 1522 aa35.19■■■■□ 3.22
POLR2I-203ENST00000586439 ZNF608Q9ULD9 1512 aaPredicted RBP35.16■■■■□ 3.22
POLR2I-203ENST00000586439 IFT140Q96RY7 1462 aa35.16■■■■□ 3.22
POLR2I-203ENST00000586439 ABCC8Q09428 1581 aa35.08■■■■□ 3.21
POLR2I-203ENST00000586439 DNMBPQ6XZF7 1577 aa35.04■■■■□ 3.2
POLR2I-203ENST00000586439 EIF4G3O43432 1585 aaKnown RBP34.92■■■■□ 3.18
POLR2I-203ENST00000586439 TARBP1Q13395 1621 aaKnown RBP34.88■■■■□ 3.17
POLR2I-203ENST00000586439 AQRO60306 1485 aaKnown RBP eCLIP34.86■■■■□ 3.17
POLR2I-203ENST00000586439 POLA1P09884 1462 aaPredicted RBP34.83■■■■□ 3.17
POLR2I-203ENST00000586439 RIMBP3CA6NJZ7 1639 aa34.81■■■■□ 3.16
POLR2I-203ENST00000586439 RIMBP3BA6NNM3 1639 aa34.81■■■■□ 3.16
POLR2I-203ENST00000586439 RIMBP3Q9UFD9 1639 aa34.81■■■■□ 3.16
POLR2I-203ENST00000586439 RAD54L2Q9Y4B4 1467 aa34.76■■■■□ 3.15
POLR2I-203ENST00000586439 CHD1O14646 1710 aa34.72■■■■□ 3.15
POLR2I-203ENST00000586439 SOGA1O94964 1423 aa34.7■■■■□ 3.15
POLR2I-203ENST00000586439 ARHGEF11O15085 1522 aa34.66■■■■□ 3.14
POLR2I-203ENST00000586439 TDRD9Q8NDG6 1382 aaKnown RBP34.65■■■■□ 3.14
POLR2I-203ENST00000586439 FBLN2P98095 1184 aa34.65■■■■□ 3.14
POLR2I-203ENST00000586439 FGD5Q6ZNL6 1462 aa34.63■■■■□ 3.13
POLR2I-203ENST00000586439 CUX1P39880 1505 aa34.6■■■■□ 3.13
POLR2I-203ENST00000586439 SUPT5HO00267 1087 aaKnown RBP34.6■■■■□ 3.13
POLR2I-203ENST00000586439 CYB5RLQ6IPT4 315 aa34.49■■■■□ 3.11
POLR2I-203ENST00000586439 SNAPC4Q5SXM2 1469 aa34.46■■■■□ 3.11
POLR2I-203ENST00000586439 WDR97A6NE52 1622 aa34.44■■■■□ 3.1
POLR2I-203ENST00000586439 CHMP7Q8WUX9 453 aaPredicted RBP34.37■■■■□ 3.09
POLR2I-203ENST00000586439 GRIN2BQ13224 1484 aa34.35■■■■□ 3.09
POLR2I-203ENST00000586439 ARAP1Q96P48 1450 aa34.33■■■■□ 3.09
POLR2I-203ENST00000586439 MAGI1Q96QZ7 1491 aaPredicted RBP34.33■■■■□ 3.09
POLR2I-203ENST00000586439 PBRM1Q86U86 1689 aa34.27■■■■□ 3.08
POLR2I-203ENST00000586439 CLASP1Q7Z460 1538 aa34.26■■■■□ 3.08
POLR2I-203ENST00000586439 GAPVD1Q14C86 1478 aa34.26■■■■□ 3.07
POLR2I-203ENST00000586439 SYNJ1O43426 1573 aa34.23■■■■□ 3.07
POLR2I-203ENST00000586439 SYNJ2O15056 1496 aa34.23■■■■□ 3.07
POLR2I-203ENST00000586439 ABCA10Q8WWZ4 1543 aa34.21■■■■□ 3.07
POLR2I-203ENST00000586439 ABCA5Q8WWZ7 1642 aa34.16■■■■□ 3.06
POLR2I-203ENST00000586439 TRHP20396 242 aaPredicted RBP34.09■■■■□ 3.05
POLR2I-203ENST00000586439 WRNQ14191 1432 aaPredicted RBP eCLIP34.08■■■■□ 3.05
POLR2I-203ENST00000586439 BIVM-ERCC5R4GMW8 1640 aa34.04■■■■□ 3.04
POLR2I-203ENST00000586439 TOP2BQ02880 1626 aa34.04■■■■□ 3.04
POLR2I-203ENST00000586439 GRIN2AQ12879 1464 aa33.92■■■■□ 3.02
POLR2I-203ENST00000586439 ADAMTS12P58397 1594 aa33.89■■■■□ 3.02
POLR2I-203ENST00000586439 CEP170Q5SW79 1584 aa33.82■■■■□ 3
POLR2I-203ENST00000586439 FHAD1B1AJZ9 1412 aa33.8■■■■□ 3
POLR2I-203ENST00000586439 ERCC6L2Q5T890 1561 aa33.8■■■■□ 3
POLR2I-203ENST00000586439 NUP160Q12769 1436 aa33.79■■■■□ 3
POLR2I-203ENST00000586439 ERICH3Q5RHP9 1530 aa33.77■■■■□ 3
POLR2I-203ENST00000586439 SHROOM2Q13796 1616 aa33.65■■■□□ 2.98
POLR2I-203ENST00000586439 JPH4Q96JJ6 628 aa33.52■■■□□ 2.96
POLR2I-203ENST00000586439 PRG4Q92954 1404 aaPredicted RBP33.51■■■□□ 2.95
POLR2I-203ENST00000586439 IGF1RP08069 1367 aa33.41■■■□□ 2.94
POLR2I-203ENST00000586439 RUSC2Q8N2Y8 1516 aa33.41■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms