RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 AEBP2Q6ZN18 517 aaPredicted RBP9.09□□□□□ -0.95
ATPAF1-206ENST00000492233 CHIC1Q5VXU3 224 aa8.69□□□□□ -1.02
ATPAF1-206ENST00000492233 SLC24A1O60721 1099 aa7.78□□□□□ -1.16
ATPAF1-206ENST00000492233 NISCHQ9Y2I1 1504 aa7.77□□□□□ -1.17
ATPAF1-206ENST00000492233 SENP3Q9H4L4 574 aaPredicted RBP7.71□□□□□ -1.18
ATPAF1-206ENST00000492233 PHF23Q9BUL5 403 aaPredicted RBP7.65□□□□□ -1.18
ATPAF1-206ENST00000492233 EHMT2Q96KQ7 1210 aa7.52□□□□□ -1.21
ATPAF1-206ENST00000492233 FOXD1Q16676 465 aa7.19□□□□□ -1.26
ATPAF1-206ENST00000492233 PLPPR3Q6T4P5 718 aa7.15□□□□□ -1.26
ATPAF1-206ENST00000492233 RTN4Q9NQC3 1192 aaKnown RBP7.11□□□□□ -1.27
ATPAF1-206ENST00000492233 AMER1Q5JTC6 1135 aaPredicted RBP7.07□□□□□ -1.28
ATPAF1-206ENST00000492233 CSRNP3Q8WYN3 585 aa7.03□□□□□ -1.28
ATPAF1-206ENST00000492233 KCNA4P22459 653 aa6.99□□□□□ -1.29
ATPAF1-206ENST00000492233 NCBP3Q53F19 620 aaKnown RBP6.99□□□□□ -1.29
ATPAF1-206ENST00000492233 DAXXQ9UER7 740 aaPredicted RBP6.93□□□□□ -1.3
ATPAF1-206ENST00000492233 ADRA2BP18089 450 aa6.81□□□□□ -1.32
ATPAF1-206ENST00000492233 PPP6R1Q9UPN7 881 aa6.81□□□□□ -1.32
ATPAF1-206ENST00000492233 SLC4A1APQ9BWU0 796 aaKnown RBP6.8□□□□□ -1.32
ATPAF1-206ENST00000492233 PIAS4Q8N2W9 510 aaPredicted RBP6.77□□□□□ -1.33
ATPAF1-206ENST00000492233 PRKCSHP14314 528 aaPredicted RBP6.74□□□□□ -1.33
ATPAF1-206ENST00000492233 POTEDQ86YR6 584 aa6.71□□□□□ -1.34
ATPAF1-206ENST00000492233 MSH5O43196 834 aa6.67□□□□□ -1.34
ATPAF1-206ENST00000492233 ARXQ96QS3 562 aa6.64□□□□□ -1.35
ATPAF1-206ENST00000492233 CCDC180Q9P1Z9 1646 aa6.63□□□□□ -1.35
ATPAF1-206ENST00000492233 TAOK2Q9UL54 1235 aa6.59□□□□□ -1.35
ATPAF1-206ENST00000492233 BCANQ96GW7 911 aa6.58□□□□□ -1.36
ATPAF1-206ENST00000492233 ZCCHC6Q5VYS8 1495 aaKnown RBP6.58□□□□□ -1.36
ATPAF1-206ENST00000492233 TIMELESSQ9UNS1 1208 aa6.54□□□□□ -1.36
ATPAF1-206ENST00000492233 TULP1O00294 542 aaPredicted RBP6.5□□□□□ -1.37
ATPAF1-206ENST00000492233 TPRNQ4KMQ1 711 aa6.5□□□□□ -1.37
ATPAF1-206ENST00000492233 PLCB2Q00722 1185 aa6.48□□□□□ -1.37
ATPAF1-206ENST00000492233 HOMEZQ8IX15 550 aa6.47□□□□□ -1.37
ATPAF1-206ENST00000492233 RANGAP1P46060 587 aaPredicted RBP6.46□□□□□ -1.38
ATPAF1-206ENST00000492233 HAP1P54257 671 aaPredicted RBP6.46□□□□□ -1.38
ATPAF1-206ENST00000492233 SHROOM4Q9ULL8 1493 aa6.46□□□□□ -1.38
ATPAF1-206ENST00000492233 DCAF1Q9Y4B6 1507 aa6.45□□□□□ -1.38
ATPAF1-206ENST00000492233 ZBTB22O15209 634 aa6.43□□□□□ -1.38
ATPAF1-206ENST00000492233 GTF3C3Q9Y5Q9 886 aa6.38□□□□□ -1.39
ATPAF1-206ENST00000492233 TTBK1Q5TCY1 1321 aaPredicted RBP6.38□□□□□ -1.39
ATPAF1-206ENST00000492233 ERICH6Q7L0X2 663 aa6.37□□□□□ -1.39
ATPAF1-206ENST00000492233 PELP1Q8IZL8 1130 aaKnown RBP6.37□□□□□ -1.39
ATPAF1-206ENST00000492233 FKBP8Q14318 412 aa6.34□□□□□ -1.39
ATPAF1-206ENST00000492233 SUPT5HO00267 1087 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-206ENST00000492233 VSIG10Q8N0Z9 540 aa6.33□□□□□ -1.4
ATPAF1-206ENST00000492233 APLP2Q06481 763 aa6.31□□□□□ -1.4
ATPAF1-206ENST00000492233 DCAF8L2P0C7V8 631 aa6.3□□□□□ -1.4
ATPAF1-206ENST00000492233 MYO15BQ96JP2 1530 aa6.3□□□□□ -1.4
ATPAF1-206ENST00000492233 MYT1Q01538 1121 aa6.29□□□□□ -1.4
ATPAF1-206ENST00000492233 NPM3O75607 178 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-206ENST00000492233 PPP4R3CPQ6ZMV5 832 aa6.28□□□□□ -1.4
ATPAF1-206ENST00000492233 PODXL2Q9NZ53 605 aa6.27□□□□□ -1.41
ATPAF1-206ENST00000492233 MAPK8IP2Q13387 824 aaPredicted RBP6.23□□□□□ -1.41
ATPAF1-206ENST00000492233 TMEM132AQ24JP5 1023 aa6.21□□□□□ -1.42
ATPAF1-206ENST00000492233 C14orf37Q86TY3 774 aa6.21□□□□□ -1.42
ATPAF1-206ENST00000492233 FOXD4L1Q9NU39 408 aa6.2□□□□□ -1.42
ATPAF1-206ENST00000492233 ABCC9O60706 1549 aa6.18□□□□□ -1.42
ATPAF1-206ENST00000492233 KLHL34Q8N239 644 aa6.17□□□□□ -1.42
ATPAF1-206ENST00000492233 SCAF1Q9H7N4 1312 aaKnown RBP6.17□□□□□ -1.42
ATPAF1-206ENST00000492233 NACADO15069 1562 aa6.16□□□□□ -1.42
ATPAF1-206ENST00000492233 KDM2AQ9Y2K7 1162 aa6.15□□□□□ -1.42
ATPAF1-206ENST00000492233 NPM2Q86SE8 214 aaKnown RBP6.14□□□□□ -1.43
ATPAF1-206ENST00000492233 DMRT2Q9Y5R5 561 aa6.13□□□□□ -1.43
ATPAF1-206ENST00000492233 SCRIBQ14160 1630 aa6.13□□□□□ -1.43
ATPAF1-206ENST00000492233 RSF1Q96T23 1441 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-206ENST00000492233 FBLN2P98095 1184 aa6.1□□□□□ -1.43
ATPAF1-206ENST00000492233 FBXO3Q9UK99 471 aa6.09□□□□□ -1.43
ATPAF1-206ENST00000492233 RB1CC1Q8TDY2 1594 aa6.05□□□□□ -1.44
ATPAF1-206ENST00000492233 CECR2Q9BXF3 1484 aa6.02□□□□□ -1.44
ATPAF1-206ENST00000492233 NBR1Q14596 966 aa6.02□□□□□ -1.45
ATPAF1-206ENST00000492233 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.02□□□□□ -1.45
ATPAF1-206ENST00000492233 MROH2BQ7Z745 1585 aa6.01□□□□□ -1.45
ATPAF1-206ENST00000492233 TRIM26Q12899 539 aaPredicted RBP6□□□□□ -1.45
ATPAF1-206ENST00000492233 PAXIP1Q6ZW49 1069 aaPredicted RBP6□□□□□ -1.45
ATPAF1-206ENST00000492233 CNKSR2Q8WXI2 1034 aa5.99□□□□□ -1.45
ATPAF1-206ENST00000492233 CFAP44Q96MT7 982 aa5.99□□□□□ -1.45
ATPAF1-206ENST00000492233 EIF5BO60841 1220 aaKnown RBP5.98□□□□□ -1.45
ATPAF1-206ENST00000492233 BAZ1AQ9NRL2 1556 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-206ENST00000492233 LOC105371045A0A1W2PR82 267 aa5.95□□□□□ -1.46
ATPAF1-206ENST00000492233 DCAF8L1A6NGE4 600 aa5.95□□□□□ -1.46
ATPAF1-206ENST00000492233 BBXQ8WY36 941 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-206ENST00000492233 TRIM41Q8WV44 630 aa5.94□□□□□ -1.46
ATPAF1-206ENST00000492233 UBTFP17480 764 aaKnown RBP5.93□□□□□ -1.46
ATPAF1-206ENST00000492233 HRCP23327 699 aa5.93□□□□□ -1.46
ATPAF1-206ENST00000492233 WIZO95785 1651 aa5.93□□□□□ -1.46
ATPAF1-206ENST00000492233 HOXD11P31277 338 aaPredicted RBP5.92□□□□□ -1.46
ATPAF1-206ENST00000492233 TOP2AP11388 1531 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-206ENST00000492233 TSHZ2Q9NRE2 1034 aa5.91□□□□□ -1.46
ATPAF1-206ENST00000492233 RNF216Q9NWF9 866 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-206ENST00000492233 EIF4G1Q04637 1599 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-206ENST00000492233 SMARCA4P51532 1647 aa5.9□□□□□ -1.46
ATPAF1-206ENST00000492233 PCGF6Q9BYE7 350 aa5.89□□□□□ -1.47
ATPAF1-206ENST00000492233 ATXN8OSP0DMR3 200 aa5.87□□□□□ -1.47
ATPAF1-206ENST00000492233 BICRAQ9NZM4 1560 aa5.87□□□□□ -1.47
ATPAF1-206ENST00000492233 UNC13AQ9UPW8 1703 aa5.86□□□□□ -1.47
ATPAF1-206ENST00000492233 CCDC88BA6NC98 1476 aa5.86□□□□□ -1.47
ATPAF1-206ENST00000492233 SPRYD3Q8NCJ5 442 aa5.86□□□□□ -1.47
ATPAF1-206ENST00000492233 SMARCA2P51531 1590 aa5.85□□□□□ -1.47
ATPAF1-206ENST00000492233 PEG3Q9GZU2 1588 aa5.84□□□□□ -1.47
ATPAF1-206ENST00000492233 NPM1P06748 294 aaKnown RBP eCLIP5.84□□□□□ -1.47
ATPAF1-206ENST00000492233 PKD2Q13563 968 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms