RNA–Protein interactions for RNA: ENST00000383620.4

HLA-H-201, Transcript of major histocompatibility complex, class I, H (pseudogene), humanhuman

BASIC

Gene HLA-H, Length 1,096 nt, Biotype unprocessed pseudogene, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-H-201ENST00000383620 NISCHQ9Y2I1 1504 aa39.21■■■■□ 3.87
HLA-H-201ENST00000383620 CCDC180Q9P1Z9 1646 aa34.83■■■■□ 3.17
HLA-H-201ENST00000383620 ABCC9O60706 1549 aa33.77■■■■□ 3
HLA-H-201ENST00000383620 ZCCHC6Q5VYS8 1495 aaKnown RBP32.74■■■□□ 2.83
HLA-H-201ENST00000383620 NACADO15069 1562 aa32.67■■■□□ 2.82
HLA-H-201ENST00000383620 RB1CC1Q8TDY2 1594 aa32.66■■■□□ 2.82
HLA-H-201ENST00000383620 DCAF8L2P0C7V8 631 aa32.61■■■□□ 2.81
HLA-H-201ENST00000383620 MYO15BQ96JP2 1530 aa32.57■■■□□ 2.8
HLA-H-201ENST00000383620 DCAF1Q9Y4B6 1507 aa32.5■■■□□ 2.79
HLA-H-201ENST00000383620 UNC13AQ9UPW8 1703 aa31.84■■■□□ 2.69
HLA-H-201ENST00000383620 SCRIBQ14160 1630 aa31.74■■■□□ 2.67
HLA-H-201ENST00000383620 BICRAQ9NZM4 1560 aa31.58■■■□□ 2.65
HLA-H-201ENST00000383620 PABPN1Q86U42 306 aaKnown RBP eCLIP31.54■■■□□ 2.64
HLA-H-201ENST00000383620 SHROOM4Q9ULL8 1493 aa31.41■■■□□ 2.62
HLA-H-201ENST00000383620 EIF4G1Q04637 1599 aaKnown RBP30.77■■■□□ 2.52
HLA-H-201ENST00000383620 DNAJC5BQ9UF47 199 aa30.67■■■□□ 2.5
HLA-H-201ENST00000383620 CC2D2AQ9P2K1 1620 aa30.58■■■□□ 2.49
HLA-H-201ENST00000383620 CECR2Q9BXF3 1484 aa30.46■■■□□ 2.47
HLA-H-201ENST00000383620 BAZ1AQ9NRL2 1556 aaPredicted RBP30.42■■■□□ 2.46
HLA-H-201ENST00000383620 SMARCA4P51532 1647 aa30.39■■■□□ 2.46
HLA-H-201ENST00000383620 MROH2BQ7Z745 1585 aa30.2■■■□□ 2.42
HLA-H-201ENST00000383620 SMARCA2P51531 1590 aa30.19■■■□□ 2.42
HLA-H-201ENST00000383620 ATAD2BQ9ULI0 1458 aa30.15■■■□□ 2.42
HLA-H-201ENST00000383620 NCAPD3P42695 1498 aa30.11■■■□□ 2.41
HLA-H-201ENST00000383620 PEG3Q9GZU2 1588 aa30.11■■■□□ 2.41
HLA-H-201ENST00000383620 HMGXB3Q12766 1538 aa30.03■■■□□ 2.4
HLA-H-201ENST00000383620 BAZ1BQ9UIG0 1483 aaKnown RBP29.95■■■□□ 2.39
HLA-H-201ENST00000383620 RSF1Q96T23 1441 aaPredicted RBP29.93■■■□□ 2.38
HLA-H-201ENST00000383620 WIZO95785 1651 aa29.88■■■□□ 2.37
HLA-H-201ENST00000383620 TOP2AP11388 1531 aaKnown RBP29.64■■■□□ 2.34
HLA-H-201ENST00000383620 LAMC3Q9Y6N6 1575 aa29.32■■■□□ 2.28
HLA-H-201ENST00000383620 SUPT5HO00267 1087 aaKnown RBP29.32■■■□□ 2.28
HLA-H-201ENST00000383620 NESP48681 1621 aa29.26■■■□□ 2.27
HLA-H-201ENST00000383620 CADPSQ9ULU8 1353 aa29.24■■■□□ 2.27
HLA-H-201ENST00000383620 CCDC88BA6NC98 1476 aa29.23■■■□□ 2.27
HLA-H-201ENST00000383620 ERCC6Q03468 1493 aa29.16■■■□□ 2.26
HLA-H-201ENST00000383620 CFTRP13569 1480 aa29.12■■■□□ 2.25
HLA-H-201ENST00000383620 PDS5BQ9NTI5 1447 aa29.11■■■□□ 2.25
HLA-H-201ENST00000383620 PRDM2Q13029 1718 aa28.97■■■□□ 2.23
HLA-H-201ENST00000383620 KIF21AQ7Z4S6 1674 aa28.96■■■□□ 2.23
HLA-H-201ENST00000383620 FANCD2Q9BXW9 1451 aa28.91■■■□□ 2.22
HLA-H-201ENST00000383620 CEP164Q9UPV0 1460 aa28.89■■■□□ 2.22
HLA-H-201ENST00000383620 THOC2Q8NI27 1593 aaKnown RBP28.84■■■□□ 2.21
HLA-H-201ENST00000383620 MRC2Q9UBG0 1479 aa28.79■■■□□ 2.2
HLA-H-201ENST00000383620 CUX2O14529 1486 aa28.77■■■□□ 2.2
HLA-H-201ENST00000383620 WDR62O43379 1518 aa28.69■■■□□ 2.18
HLA-H-201ENST00000383620 URB2Q14146 1524 aaKnown RBP28.59■■■□□ 2.17
HLA-H-201ENST00000383620 ABCC8Q09428 1581 aa28.54■■■□□ 2.16
HLA-H-201ENST00000383620 DNMBPQ6XZF7 1577 aa28.49■■■□□ 2.15
HLA-H-201ENST00000383620 TOPBP1Q92547 1522 aa28.48■■■□□ 2.15
HLA-H-201ENST00000383620 CUX1P39880 1505 aa28.33■■■□□ 2.13
HLA-H-201ENST00000383620 IFT140Q96RY7 1462 aa28.27■■■□□ 2.12
HLA-H-201ENST00000383620 WRNQ14191 1432 aaPredicted RBP eCLIP28.26■■■□□ 2.12
HLA-H-201ENST00000383620 POLA1P09884 1462 aaPredicted RBP28.25■■■□□ 2.11
HLA-H-201ENST00000383620 FGD5Q6ZNL6 1462 aa28.21■■■□□ 2.11
HLA-H-201ENST00000383620 TOP2BQ02880 1626 aa28.18■■■□□ 2.1
HLA-H-201ENST00000383620 BIVM-ERCC5R4GMW8 1640 aa28.18■■■□□ 2.1
HLA-H-201ENST00000383620 SYNJ1O43426 1573 aa28.15■■■□□ 2.1
HLA-H-201ENST00000383620 TARBP1Q13395 1621 aaKnown RBP28.14■■■□□ 2.09
HLA-H-201ENST00000383620 SOGA1O94964 1423 aa28.13■■■□□ 2.09
HLA-H-201ENST00000383620 RAD54L2Q9Y4B4 1467 aa28.08■■■□□ 2.09
HLA-H-201ENST00000383620 ZNF608Q9ULD9 1512 aaPredicted RBP28.05■■■□□ 2.08
HLA-H-201ENST00000383620 WDR97A6NE52 1622 aa28.02■■■□□ 2.08
HLA-H-201ENST00000383620 EIF4G3O43432 1585 aaKnown RBP28.02■■■□□ 2.08
HLA-H-201ENST00000383620 ABCA10Q8WWZ4 1543 aa27.97■■■□□ 2.07
HLA-H-201ENST00000383620 AQRO60306 1485 aaKnown RBP eCLIP27.92■■■□□ 2.06
HLA-H-201ENST00000383620 TDRD9Q8NDG6 1382 aaKnown RBP27.91■■■□□ 2.06
HLA-H-201ENST00000383620 ABCA5Q8WWZ7 1642 aa27.84■■■□□ 2.05
HLA-H-201ENST00000383620 GAPVD1Q14C86 1478 aa27.83■■■□□ 2.04
HLA-H-201ENST00000383620 GRIN2BQ13224 1484 aa27.81■■■□□ 2.04
HLA-H-201ENST00000383620 PBRM1Q86U86 1689 aa27.76■■■□□ 2.03
HLA-H-201ENST00000383620 MAGI1Q96QZ7 1491 aaPredicted RBP27.73■■■□□ 2.03
HLA-H-201ENST00000383620 SNAPC4Q5SXM2 1469 aa27.72■■■□□ 2.03
HLA-H-201ENST00000383620 TRIM41Q8WV44 630 aa27.72■■■□□ 2.03
HLA-H-201ENST00000383620 KIF27Q86VH2 1401 aa27.67■■■□□ 2.02
HLA-H-201ENST00000383620 ERICH3Q5RHP9 1530 aa27.66■■■□□ 2.02
HLA-H-201ENST00000383620 SYNJ2O15056 1496 aa27.6■■■□□ 2.01
HLA-H-201ENST00000383620 CHD1O14646 1710 aa27.59■■■□□ 2.01
HLA-H-201ENST00000383620 ADAMTS12P58397 1594 aa27.57■■■□□ 2
HLA-H-201ENST00000383620 FBLN2P98095 1184 aa27.56■■■□□ 2
HLA-H-201ENST00000383620 OSCARQ8IYS5 282 aa27.56■■■□□ 2
HLA-H-201ENST00000383620 CHMP7Q8WUX9 453 aaPredicted RBP27.54■■■□□ 2
HLA-H-201ENST00000383620 FHAD1B1AJZ9 1412 aa27.53■■■□□ 2
HLA-H-201ENST00000383620 DNAJC5Q9H3Z4 198 aa27.53■■■□□ 2
HLA-H-201ENST00000383620 CHIC1Q5VXU3 224 aa27.48■■□□□ 1.99
HLA-H-201ENST00000383620 CUL7Q14999 1698 aa27.47■■□□□ 1.99
HLA-H-201ENST00000383620 IGF1RP08069 1367 aa27.46■■□□□ 1.99
HLA-H-201ENST00000383620 GRIN2AQ12879 1464 aa27.44■■□□□ 1.98
HLA-H-201ENST00000383620 RUSC2Q8N2Y8 1516 aa27.37■■□□□ 1.97
HLA-H-201ENST00000383620 CARMIL1Q5VZK9 1371 aa27.33■■□□□ 1.97
HLA-H-201ENST00000383620 EEA1Q15075 1411 aa27.33■■□□□ 1.96
HLA-H-201ENST00000383620 CLASP1Q7Z460 1538 aa27.31■■□□□ 1.96
HLA-H-201ENST00000383620 NUP160Q12769 1436 aa27.3■■□□□ 1.96
HLA-H-201ENST00000383620 CEP170Q5SW79 1584 aa27.27■■□□□ 1.96
HLA-H-201ENST00000383620 RAPGEF2Q9Y4G8 1499 aa27.22■■□□□ 1.95
HLA-H-201ENST00000383620 CSRNP3Q8WYN3 585 aa27.17■■□□□ 1.94
HLA-H-201ENST00000383620 PRXQ9BXM0 1461 aa27.17■■□□□ 1.94
HLA-H-201ENST00000383620 ARHGEF11O15085 1522 aa27.14■■□□□ 1.94
HLA-H-201ENST00000383620 KIAA0586Q9BVV6 1533 aa27.11■■□□□ 1.93
HLA-H-201ENST00000383620 RIMBP3CA6NJZ7 1639 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms