Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.95□□□□□ -0.028e-7■■■■□ 25.3
SRSF1Q07955 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.228e-7■■■■□ 25.3
SRSF1Q07955 STX3-207ENST00000633708 3111 ntTSL 5 BASIC11.33□□□□□ -0.68e-7■■■■□ 25.3
SRSF1Q07955 STX3-208ENST00000641815 3236 ntBASIC4.65□□□□□ -1.678e-7■■■■□ 25.3
SRSF1Q07955 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.22■□□□□ 0.033e-8■■■■□ 25.2
SRSF1Q07955 TMEM63A-203ENST00000474478 5407 ntTSL 210.6□□□□□ -0.713e-8■■■■□ 25.2
SRSF1Q07955 TMEM63A-205ENST00000483779 634 ntTSL 210.53□□□□□ -0.723e-8■■■■□ 25.2
SRSF1Q07955 TMEM63A-201ENST00000366835 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.033e-8■■■■□ 25.2
SRSF1Q07955 GFPT1-204ENST00000494201 625 ntTSL 57.5□□□□□ -1.212e-10■■■■□ 25.2
SRSF1Q07955 SERINC1-201ENST00000339697 3137 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.131e-7■■■■□ 25.1
SRSF1Q07955 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.32■■□□□ 1.485e-7■■■■□ 25.1
SRSF1Q07955 ZFX-207ENST00000459724 673 ntTSL 522.01■■□□□ 1.115e-7■■■■□ 25.1
SRSF1Q07955 PDPK1-207ENST00000462923 550 ntTSL 519.46■□□□□ 0.713e-10■■■■□ 25.1
SRSF1Q07955 PDPK1-215ENST00000566659 451 ntTSL 319.46■□□□□ 0.713e-10■■■■□ 25.1
SRSF1Q07955 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.29■□□□□ 0.683e-10■■■■□ 25.1
SRSF1Q07955 USP10-205ENST00000562743 888 ntTSL 217.67■□□□□ 0.425e-7■■■■□ 25.1
SRSF1Q07955 USP10-208ENST00000563386 590 ntTSL 417.56■□□□□ 0.45e-7■■■■□ 25.1
SRSF1Q07955 PDPK1-213ENST00000492021 552 ntTSL 517.33■□□□□ 0.363e-10■■■■□ 25.1
SRSF1Q07955 USP10-204ENST00000562283 569 ntTSL 416.73■□□□□ 0.275e-7■■■■□ 25.1
SRSF1Q07955 USP10-203ENST00000562092 254 ntTSL 516.04■□□□□ 0.165e-7■■■■□ 25.1
SRSF1Q07955 USP10-210ENST00000563892 570 ntTSL 316.04■□□□□ 0.165e-7■■■■□ 25.1
SRSF1Q07955 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.77□□□□□ -0.055e-7■■■■□ 25.1
SRSF1Q07955 PDE8A-211ENST00000559742 2584 ntTSL 1 (best)14.52□□□□□ -0.093e-7■■■■□ 25.1
SRSF1Q07955 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.163e-7■■■■□ 25.1
SRSF1Q07955 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.04□□□□□ -0.165e-7■■■■□ 25.1
SRSF1Q07955 PDPK1-217ENST00000570136 1125 ntTSL 213.91□□□□□ -0.183e-10■■■■□ 25.1
SRSF1Q07955 PDE8A-204ENST00000478717 2722 ntTSL 1 (best)13.9□□□□□ -0.183e-7■■■■□ 25.1
SRSF1Q07955 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.4□□□□□ -0.267e-7■■■■□ 25.1
SRSF1Q07955 PDE8A-205ENST00000485596 2999 ntTSL 1 (best)13.13□□□□□ -0.313e-7■■■■□ 25.1
SRSF1Q07955 RTEL1-TNFRSF6B-203ENST00000492259 4824 ntAPPRIS ALT2 TSL 512.9□□□□□ -0.347e-7■■■■□ 25.1
SRSF1Q07955 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC12.69□□□□□ -0.385e-7■■■■□ 25.1
SRSF1Q07955 PDPK1-210ENST00000474706 699 ntTSL 512.67□□□□□ -0.383e-10■■■■□ 25.1
SRSF1Q07955 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.34□□□□□ -0.437e-7■■■■□ 25.1
SRSF1Q07955 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.32□□□□□ -0.447e-7■■■■□ 25.1
SRSF1Q07955 CENPT-227ENST00000568495 1098 ntTSL 512.14□□□□□ -0.472e-7■■■■□ 25.1
SRSF1Q07955 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.483e-10■■■■□ 25.1
SRSF1Q07955 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.04□□□□□ -0.483e-10■■■■□ 25.1
SRSF1Q07955 NUP85-207ENST00000578294 385 ntTSL 212.04□□□□□ -0.485e-7■■■■□ 25.1
SRSF1Q07955 USP10-215ENST00000569038 730 ntTSL 311.99□□□□□ -0.495e-7■■■■□ 25.1
SRSF1Q07955 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.57e-7■■■■□ 25.1
SRSF1Q07955 USP10-207ENST00000563048 1315 ntTSL 211.67□□□□□ -0.545e-7■■■■□ 25.1
SRSF1Q07955 RNPS1-221ENST00000566783 1826 nt11.66□□□□□ -0.545e-7■■■■□ 25.1
SRSF1Q07955 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.593e-7■■■■□ 25.1
SRSF1Q07955 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.65e-7■■■■□ 25.1
SRSF1Q07955 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.63e-7■■■■□ 25.1
SRSF1Q07955 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.615e-7■■■■□ 25.1
SRSF1Q07955 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.635e-7■■■■□ 25.1
SRSF1Q07955 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.685e-7■■■■□ 25.1
SRSF1Q07955 RNPS1-214ENST00000565333 479 ntTSL 410.74□□□□□ -0.695e-7■■■■□ 25.1
SRSF1Q07955 RNPS1-225ENST00000569709 574 ntTSL 410.66□□□□□ -0.75e-7■■■■□ 25.1
SRSF1Q07955 RNPS1-211ENST00000564764 639 ntTSL 310.03□□□□□ -0.85e-7■■■■□ 25.1
SRSF1Q07955 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC10.02□□□□□ -0.817e-7■■■■□ 25.1
SRSF1Q07955 TXLNA-202ENST00000373610 4854 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.855e-7■■■■□ 25.1
SRSF1Q07955 USP10-219ENST00000570191 2717 ntTSL 2 BASIC9.51□□□□□ -0.895e-7■■■■□ 25.1
SRSF1Q07955 USP10-202ENST00000540269 3070 ntTSL 1 (best)9.38□□□□□ -0.915e-7■■■■□ 25.1
SRSF1Q07955 PDE8A-208ENST00000557957 3716 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.993e-7■■■■□ 25.1
SRSF1Q07955 NSMAF-208ENST00000519227 583 ntTSL 48.53□□□□□ -1.045e-7■■■■□ 25.1
SRSF1Q07955 NSMAF-201ENST00000038176 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.115e-7■■■■□ 25.1
SRSF1Q07955 NUP85-203ENST00000540768 1926 ntTSL 2 BASIC8.07□□□□□ -1.125e-7■■■■□ 25.1
SRSF1Q07955 NSMAF-216ENST00000523982 562 ntTSL 47.69□□□□□ -1.185e-7■■■■□ 25.1
SRSF1Q07955 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.215e-7■■■■□ 25.1
SRSF1Q07955 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC6.46□□□□□ -1.385e-7■■■■□ 25.1
SRSF1Q07955 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.45e-7■■■■□ 25.1
SRSF1Q07955 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.26□□□□□ -1.415e-7■■■■□ 25.1
SRSF1Q07955 PDE8A-213ENST00000560789 4664 ntTSL 24.86□□□□□ -1.635e-7■■■■□ 25.1
SRSF1Q07955 USP10-206ENST00000563023 574 ntTSL 44.68□□□□□ -1.665e-7■■■■□ 25.1
SRSF1Q07955 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.25□□□□□ -1.735e-7■■■■□ 25.1
SRSF1Q07955 USP10-218ENST00000570053 502 ntTSL 34.23□□□□□ -1.735e-7■■■■□ 25.1
SRSF1Q07955 PDE8A-214ENST00000561024 2601 ntTSL 1 (best)3.98□□□□□ -1.775e-7■■■■□ 25.1
SRSF1Q07955 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.785e-7■■■■□ 25.1
SRSF1Q07955 NUP85-209ENST00000578987 388 ntTSL 33.81□□□□□ -1.85e-7■■■■□ 25.1
SRSF1Q07955 USP10-213ENST00000566512 575 ntTSL 23.76□□□□□ -1.815e-7■■■■□ 25.1
SRSF1Q07955 NUP85-213ENST00000579838 373 ntTSL 43.66□□□□□ -1.825e-7■■■■□ 25.1
SRSF1Q07955 NUP85-225ENST00000584155 300 ntTSL 23.6□□□□□ -1.835e-7■■■■□ 25.1
SRSF1Q07955 NUP85-214ENST00000579900 528 ntTSL 53.3□□□□□ -1.885e-7■■■■□ 25.1
SRSF1Q07955 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.29□□□□□ -2.045e-7■■■■□ 25.1
SRSF1Q07955 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.24■□□□□ 0.192e-8■■■■□ 25
SRSF1Q07955 LONP1-211ENST00000590558 2884 ntTSL 514.62□□□□□ -0.072e-8■■■■□ 25
SRSF1Q07955 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.12e-8■■■■□ 25
SRSF1Q07955 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.06□□□□□ -0.162e-8■■■■□ 25
SRSF1Q07955 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC11.8□□□□□ -0.522e-8■■■■□ 25
SRSF1Q07955 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.4□□□□□ -0.582e-8■■■■□ 25
SRSF1Q07955 MAPK14-206ENST00000474429 823 ntTSL 510.18□□□□□ -0.783e-8■■■■□ 25
SRSF1Q07955 MAPK14-205ENST00000472333 585 ntTSL 56.37□□□□□ -1.393e-8■■■■□ 25
SRSF1Q07955 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.25□□□□□ -1.413e-8■■■■□ 25
SRSF1Q07955 MAPK14-208ENST00000491957 2777 ntTSL 1 (best)5.89□□□□□ -1.473e-8■■■■□ 25
SRSF1Q07955 MAPK14-209ENST00000496250 2750 ntTSL 1 (best)5.61□□□□□ -1.513e-8■■■■□ 25
SRSF1Q07955 MAPK14-207ENST00000490379 450 ntTSL 33.42□□□□□ -1.863e-8■■■■□ 25
SRSF1Q07955 ZNF432-204ENST00000598446 862 ntTSL 317.5■□□□□ 0.393e-7■■■■□ 25
SRSF1Q07955 TCF25-210ENST00000563484 468 ntTSL 211.42□□□□□ -0.588e-8■■■■□ 25
SRSF1Q07955 ZNF841-204ENST00000594440 721 ntTSL 37.79□□□□□ -1.163e-7■■■■□ 25
SRSF1Q07955 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC5.97□□□□□ -1.453e-7■■■■□ 25
SRSF1Q07955 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.483e-7■■■■□ 25
SRSF1Q07955 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.53e-7■■■■□ 25
SRSF1Q07955 ANP32A-204ENST00000480858 352 ntTSL 1 (best)14.07□□□□□ -0.164e-14■■■■□ 25
SRSF1Q07955 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.072e-7■■■■□ 24.9
SRSF1Q07955 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.82e-7■■■■□ 24.9
SRSF1Q07955 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.862e-7■■■■□ 24.9
SRSF1Q07955 SET-208ENST00000477806 957 ntTSL 1 (best)11.31□□□□□ -0.65e-32■■■■□ 24.9
SRSF1Q07955 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.746e-9■■■■□ 24.9
Retrieved 100 of 14,836 protein–RNA pairs in 420.5 ms