RNA–Protein interactions for RNA: ENST00000560789.5

PDE8A-213, Transcript of phosphodiesterase 8A, humanhuman

TSL 2

Gene PDE8A, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-213ENST00000560789 NISCHQ9Y2I1 1504 aa10.19□□□□□ -0.78
PDE8A-213ENST00000560789 DCAF8L2P0C7V8 631 aa9.83□□□□□ -0.84
PDE8A-213ENST00000560789 SUPT5HO00267 1087 aaKnown RBP9.58□□□□□ -0.88
PDE8A-213ENST00000560789 SHROOM4Q9ULL8 1493 aa9.39□□□□□ -0.91
PDE8A-213ENST00000560789 PELP1Q8IZL8 1130 aaKnown RBP9.26□□□□□ -0.93
PDE8A-213ENST00000560789 ZEB1P37275 1124 aaPredicted RBP9.2□□□□□ -0.94
PDE8A-213ENST00000560789 APLP2Q06481 763 aa9.14□□□□□ -0.95
PDE8A-213ENST00000560789 PCGF6Q9BYE7 350 aa9.05□□□□□ -0.96
PDE8A-213ENST00000560789 CENPBP07199 599 aaPredicted RBP9.01□□□□□ -0.97
PDE8A-213ENST00000560789 TRIM41Q8WV44 630 aa9.01□□□□□ -0.97
PDE8A-213ENST00000560789 FAM9AQ8IZU1 332 aaPredicted RBP8.96□□□□□ -0.98
PDE8A-213ENST00000560789 EHMT2Q96KQ7 1210 aa8.95□□□□□ -0.98
PDE8A-213ENST00000560789 MYT1Q01538 1121 aa8.91□□□□□ -0.98
PDE8A-213ENST00000560789 CCER1Q8TC90 406 aaPredicted RBP8.89□□□□□ -0.99
PDE8A-213ENST00000560789 TRIM26Q12899 539 aaPredicted RBP8.88□□□□□ -0.99
PDE8A-213ENST00000560789 HRCP23327 699 aa8.84□□□□□ -0.99
PDE8A-213ENST00000560789 CHIC1Q5VXU3 224 aa8.8□□□□□ -1
PDE8A-213ENST00000560789 UBTFP17480 764 aaKnown RBP8.8□□□□□ -1
PDE8A-213ENST00000560789 TTBK1Q5TCY1 1321 aaPredicted RBP8.71□□□□□ -1.02
PDE8A-213ENST00000560789 NEFLP07196 543 aa8.7□□□□□ -1.02
PDE8A-213ENST00000560789 ERICH6Q7L0X2 663 aa8.69□□□□□ -1.02
PDE8A-213ENST00000560789 RANGAP1P46060 587 aaPredicted RBP8.61□□□□□ -1.03
PDE8A-213ENST00000560789 ATP1B4Q9UN42 357 aaPredicted RBP8.59□□□□□ -1.03
PDE8A-213ENST00000560789 LOC105371045A0A1W2PR82 267 aa8.59□□□□□ -1.04
PDE8A-213ENST00000560789 YTHDC1Q96MU7 727 aaKnown RBP8.53□□□□□ -1.04
PDE8A-213ENST00000560789 ZCCHC6Q5VYS8 1495 aaKnown RBP8.5□□□□□ -1.05
PDE8A-213ENST00000560789 PPARGC1BQ86YN6 1023 aaKnown RBP8.49□□□□□ -1.05
PDE8A-213ENST00000560789 DIEXFQ68CQ4 756 aaKnown RBP8.48□□□□□ -1.05
PDE8A-213ENST00000560789 CCDC180Q9P1Z9 1646 aa8.46□□□□□ -1.05
PDE8A-213ENST00000560789 DCAF1Q9Y4B6 1507 aa8.46□□□□□ -1.05
PDE8A-213ENST00000560789 HNRNPUL2Q1KMD3 747 aaKnown RBP8.45□□□□□ -1.06
PDE8A-213ENST00000560789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.4□□□□□ -1.06
PDE8A-213ENST00000560789 CLSPNQ9HAW4 1339 aa8.38□□□□□ -1.07
PDE8A-213ENST00000560789 ITGAEP38570 1179 aa8.38□□□□□ -1.07
PDE8A-213ENST00000560789 ABCC9O60706 1549 aa8.37□□□□□ -1.07
PDE8A-213ENST00000560789 ZNF316A6NFI3 1004 aaPredicted RBP8.36□□□□□ -1.07
PDE8A-213ENST00000560789 DAXXQ9UER7 740 aaPredicted RBP8.35□□□□□ -1.07
PDE8A-213ENST00000560789 CSRNP3Q8WYN3 585 aa8.35□□□□□ -1.07
PDE8A-213ENST00000560789 FAM50AQ14320 339 aaKnown RBP8.28□□□□□ -1.08
PDE8A-213ENST00000560789 ACIN1Q9UKV3 1341 aaKnown RBP8.28□□□□□ -1.08
PDE8A-213ENST00000560789 ANP32CO43423 234 aa8.28□□□□□ -1.08
PDE8A-213ENST00000560789 GTF3C3Q9Y5Q9 886 aa8.27□□□□□ -1.09
PDE8A-213ENST00000560789 EEA1Q15075 1411 aa8.25□□□□□ -1.09
PDE8A-213ENST00000560789 RTL5Q5HYW3 569 aaPredicted RBP8.24□□□□□ -1.09
PDE8A-213ENST00000560789 POLR3GLQ9BT43 218 aa8.23□□□□□ -1.09
PDE8A-213ENST00000560789 SCRIBQ14160 1630 aa8.23□□□□□ -1.09
PDE8A-213ENST00000560789 PABPN1Q86U42 306 aaKnown RBP eCLIP8.23□□□□□ -1.09
PDE8A-213ENST00000560789 TRIM52Q96A61 297 aa8.21□□□□□ -1.09
PDE8A-213ENST00000560789 CDK11AQ9UQ88 783 aaPredicted RBP8.2□□□□□ -1.1
PDE8A-213ENST00000560789 MYT1LQ9UL68 1186 aa8.19□□□□□ -1.1
PDE8A-213ENST00000560789 NEUROD1Q13562 356 aa8.18□□□□□ -1.1
PDE8A-213ENST00000560789 NACADO15069 1562 aa8.15□□□□□ -1.1
PDE8A-213ENST00000560789 RSF1Q96T23 1441 aaPredicted RBP8.14□□□□□ -1.11
PDE8A-213ENST00000560789 RB1CC1Q8TDY2 1594 aa8.13□□□□□ -1.11
PDE8A-213ENST00000560789 GOLGA3Q08378 1498 aa8.11□□□□□ -1.11
PDE8A-213ENST00000560789 TONSLQ96HA7 1378 aa8.11□□□□□ -1.11
PDE8A-213ENST00000560789 CLIP1P30622 1438 aa8.09□□□□□ -1.11
PDE8A-213ENST00000560789 TNIKQ9UKE5 1360 aa8.08□□□□□ -1.12
PDE8A-213ENST00000560789 MYO15BQ96JP2 1530 aa8.06□□□□□ -1.12
PDE8A-213ENST00000560789 ANP32AP39687 249 aaKnown RBP8.06□□□□□ -1.12
PDE8A-213ENST00000560789 BCANQ96GW7 911 aa8.05□□□□□ -1.12
PDE8A-213ENST00000560789 CEP162Q5TB80 1403 aa8.05□□□□□ -1.12
PDE8A-213ENST00000560789 CEP164Q9UPV0 1460 aa8.05□□□□□ -1.12
PDE8A-213ENST00000560789 CNGB1Q14028 1251 aaPredicted RBP8.04□□□□□ -1.12
PDE8A-213ENST00000560789 BAZ1AQ9NRL2 1556 aaPredicted RBP8.03□□□□□ -1.12
PDE8A-213ENST00000560789 SLC4A1APQ9BWU0 796 aaKnown RBP8.03□□□□□ -1.12
PDE8A-213ENST00000560789 WRNQ14191 1432 aaPredicted RBP eCLIP8.02□□□□□ -1.13
PDE8A-213ENST00000560789 ZNF326Q5BKZ1 582 aaKnown RBP8.02□□□□□ -1.13
PDE8A-213ENST00000560789 P3H3Q8IVL6 736 aa8.01□□□□□ -1.13
PDE8A-213ENST00000560789 ZBTB47Q9UFB7 747 aaPredicted RBP8.01□□□□□ -1.13
PDE8A-213ENST00000560789 FKBP8Q14318 412 aa7.99□□□□□ -1.13
PDE8A-213ENST00000560789 NEFMP07197 916 aa7.99□□□□□ -1.13
PDE8A-213ENST00000560789 MTUS2Q5JR59 1369 aa7.98□□□□□ -1.13
PDE8A-213ENST00000560789 KIF27Q86VH2 1401 aa7.98□□□□□ -1.13
PDE8A-213ENST00000560789 CANXP27824 592 aaKnown RBP7.97□□□□□ -1.13
PDE8A-213ENST00000560789 HNRNPUQ00839 825 aaKnown RBP eCLIP7.97□□□□□ -1.135e-7■□□□□ 9.2
PDE8A-213ENST00000560789 DDX10Q13206 875 aaKnown RBP7.97□□□□□ -1.13
PDE8A-213ENST00000560789 TIMELESSQ9UNS1 1208 aa7.97□□□□□ -1.13
PDE8A-213ENST00000560789 SCAF1Q9H7N4 1312 aaKnown RBP7.96□□□□□ -1.14
PDE8A-213ENST00000560789 BAZ1BQ9UIG0 1483 aaKnown RBP7.95□□□□□ -1.14
PDE8A-213ENST00000560789 FBLN2P98095 1184 aa7.95□□□□□ -1.14
PDE8A-213ENST00000560789 MIER1Q8N108 512 aa7.94□□□□□ -1.14
PDE8A-213ENST00000560789 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.94□□□□□ -1.14
PDE8A-213ENST00000560789 EIF4G2P78344 907 aaKnown RBP eCLIP7.93□□□□□ -1.14
PDE8A-213ENST00000560789 ZNF777Q9ULD5 760 aaPredicted RBP7.93□□□□□ -1.14
PDE8A-213ENST00000560789 UPF2Q9HAU5 1272 aaKnown RBP7.91□□□□□ -1.14
PDE8A-213ENST00000560789 FHAD1B1AJZ9 1412 aa7.91□□□□□ -1.14
PDE8A-213ENST00000560789 TSPY4P0CV99 314 aa7.91□□□□□ -1.14
PDE8A-213ENST00000560789 TSPY10P0CW01 314 aa7.91□□□□□ -1.14
PDE8A-213ENST00000560789 TMC1Q8TDI8 760 aa7.91□□□□□ -1.14
PDE8A-213ENST00000560789 CCDC136Q96JN2 1154 aa7.9□□□□□ -1.15
PDE8A-213ENST00000560789 MRS2Q9HD23 443 aa7.9□□□□□ -1.15
PDE8A-213ENST00000560789 FAM9BQ8IZU0 186 aa7.88□□□□□ -1.15
PDE8A-213ENST00000560789 VPS8Q8N3P4 1428 aa7.87□□□□□ -1.15
PDE8A-213ENST00000560789 ANP32BQ92688 251 aaKnown RBP7.86□□□□□ -1.15
PDE8A-213ENST00000560789 CCNB3Q8WWL7 1395 aa7.86□□□□□ -1.15
PDE8A-213ENST00000560789 CECR2Q9BXF3 1484 aa7.85□□□□□ -1.15
PDE8A-213ENST00000560789 WDR43Q15061 677 aaKnown RBP eCLIP7.85□□□□□ -1.15
PDE8A-213ENST00000560789 ARID3CA6NKF2 412 aa7.84□□□□□ -1.15
PDE8A-213ENST00000560789 DDRGK1Q96HY6 314 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 233.9 ms