RNA–Protein interactions for RNA: ENST00000569709.5

RNPS1-225, Transcript of RNA binding protein with serine rich domain 1, humanhuman

TSL 4

Gene RNPS1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-225ENST00000569709 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
RNPS1-225ENST00000569709 ABCC9O60706 1549 aa24.37■■□□□ 1.49
RNPS1-225ENST00000569709 CCDC180Q9P1Z9 1646 aa24.25■■□□□ 1.47
RNPS1-225ENST00000569709 RB1CC1Q8TDY2 1594 aa23.14■■□□□ 1.3
RNPS1-225ENST00000569709 DNAJC5BQ9UF47 199 aa22.96■■□□□ 1.27
RNPS1-225ENST00000569709 NACADO15069 1562 aa22.93■■□□□ 1.26
RNPS1-225ENST00000569709 DCAF8L2P0C7V8 631 aa22.75■■□□□ 1.23
RNPS1-225ENST00000569709 UNC13AQ9UPW8 1703 aa22.68■■□□□ 1.22
RNPS1-225ENST00000569709 PABPN1Q86U42 306 aaKnown RBP eCLIP22.64■■□□□ 1.21
RNPS1-225ENST00000569709 MYO15BQ96JP2 1530 aa22.55■■□□□ 1.2
RNPS1-225ENST00000569709 BICRAQ9NZM4 1560 aa22.47■■□□□ 1.19
RNPS1-225ENST00000569709 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
RNPS1-225ENST00000569709 DCAF1Q9Y4B6 1507 aa22.21■■□□□ 1.15
RNPS1-225ENST00000569709 SHROOM4Q9ULL8 1493 aa22.15■■□□□ 1.14
RNPS1-225ENST00000569709 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
RNPS1-225ENST00000569709 CC2D2AQ9P2K1 1620 aa22.02■■□□□ 1.12
RNPS1-225ENST00000569709 CECR2Q9BXF3 1484 aa21.96■■□□□ 1.11
RNPS1-225ENST00000569709 EIF4G1Q04637 1599 aaKnown RBP21.93■■□□□ 1.1
RNPS1-225ENST00000569709 DNAJC5Q9H3Z4 198 aa21.2■□□□□ 0.98
RNPS1-225ENST00000569709 NCAPD3P42695 1498 aa21.15■□□□□ 0.98
RNPS1-225ENST00000569709 CUX2O14529 1486 aa21.07■□□□□ 0.96
RNPS1-225ENST00000569709 ATAD2BQ9ULI0 1458 aa21.07■□□□□ 0.96
RNPS1-225ENST00000569709 ERCC6Q03468 1493 aa21.07■□□□□ 0.96
RNPS1-225ENST00000569709 SMARCA4P51532 1647 aa21.05■□□□□ 0.96
RNPS1-225ENST00000569709 SMARCA2P51531 1590 aa21.02■□□□□ 0.96
RNPS1-225ENST00000569709 HMGXB3Q12766 1538 aa21.01■□□□□ 0.95
RNPS1-225ENST00000569709 BAZ1AQ9NRL2 1556 aaPredicted RBP20.9■□□□□ 0.94
RNPS1-225ENST00000569709 NESP48681 1621 aa20.89■□□□□ 0.94
RNPS1-225ENST00000569709 BAZ1BQ9UIG0 1483 aaKnown RBP20.88■□□□□ 0.93
RNPS1-225ENST00000569709 PEG3Q9GZU2 1588 aa20.83■□□□□ 0.92
RNPS1-225ENST00000569709 THOC2Q8NI27 1593 aaKnown RBP20.74■□□□□ 0.91
RNPS1-225ENST00000569709 MROH2BQ7Z745 1585 aa20.73■□□□□ 0.91
RNPS1-225ENST00000569709 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
RNPS1-225ENST00000569709 KIF21AQ7Z4S6 1674 aa20.67■□□□□ 0.9
RNPS1-225ENST00000569709 PDS5BQ9NTI5 1447 aa20.6■□□□□ 0.89
RNPS1-225ENST00000569709 WIZO95785 1651 aa20.51■□□□□ 0.87
RNPS1-225ENST00000569709 CADPSQ9ULU8 1353 aa20.49■□□□□ 0.87
RNPS1-225ENST00000569709 MRC2Q9UBG0 1479 aa20.43■□□□□ 0.86
RNPS1-225ENST00000569709 WDR62O43379 1518 aa20.4■□□□□ 0.86
RNPS1-225ENST00000569709 CEP164Q9UPV0 1460 aa20.34■□□□□ 0.85
RNPS1-225ENST00000569709 FANCD2Q9BXW9 1451 aa20.29■□□□□ 0.84
RNPS1-225ENST00000569709 CFTRP13569 1480 aa20.24■□□□□ 0.83
RNPS1-225ENST00000569709 TRIM41Q8WV44 630 aa20.23■□□□□ 0.83
RNPS1-225ENST00000569709 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
RNPS1-225ENST00000569709 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
RNPS1-225ENST00000569709 URB2Q14146 1524 aaKnown RBP20.13■□□□□ 0.81
RNPS1-225ENST00000569709 PRDM2Q13029 1718 aa20.11■□□□□ 0.81
RNPS1-225ENST00000569709 OSCARQ8IYS5 282 aa20.05■□□□□ 0.8
RNPS1-225ENST00000569709 CCDC88BA6NC98 1476 aa19.97■□□□□ 0.79
RNPS1-225ENST00000569709 IFT140Q96RY7 1462 aa19.92■□□□□ 0.78
RNPS1-225ENST00000569709 ZNF608Q9ULD9 1512 aaPredicted RBP19.91■□□□□ 0.78
RNPS1-225ENST00000569709 TOPBP1Q92547 1522 aa19.89■□□□□ 0.77
RNPS1-225ENST00000569709 RIMBP3CA6NJZ7 1639 aa19.87■□□□□ 0.77
RNPS1-225ENST00000569709 RIMBP3BA6NNM3 1639 aa19.87■□□□□ 0.77
RNPS1-225ENST00000569709 RIMBP3Q9UFD9 1639 aa19.87■□□□□ 0.77
RNPS1-225ENST00000569709 EIF4G3O43432 1585 aaKnown RBP19.83■□□□□ 0.76
RNPS1-225ENST00000569709 ABCC8Q09428 1581 aa19.83■□□□□ 0.76
RNPS1-225ENST00000569709 DNMBPQ6XZF7 1577 aa19.81■□□□□ 0.76
RNPS1-225ENST00000569709 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
RNPS1-225ENST00000569709 TARBP1Q13395 1621 aaKnown RBP19.74■□□□□ 0.75
RNPS1-225ENST00000569709 CHD1O14646 1710 aa19.73■□□□□ 0.75
RNPS1-225ENST00000569709 AQRO60306 1485 aaKnown RBP eCLIP19.7■□□□□ 0.741e-6■■■■■ 33.8
RNPS1-225ENST00000569709 POLA1P09884 1462 aaPredicted RBP19.67■□□□□ 0.74
RNPS1-225ENST00000569709 FBLN2P98095 1184 aa19.6■□□□□ 0.73
RNPS1-225ENST00000569709 CYB5RLQ6IPT4 315 aa19.6■□□□□ 0.73
RNPS1-225ENST00000569709 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
RNPS1-225ENST00000569709 SOGA1O94964 1423 aa19.57■□□□□ 0.72
RNPS1-225ENST00000569709 ARAP1Q96P48 1450 aa19.56■□□□□ 0.72
RNPS1-225ENST00000569709 TDRD9Q8NDG6 1382 aaKnown RBP19.55■□□□□ 0.72
RNPS1-225ENST00000569709 FGD5Q6ZNL6 1462 aa19.54■□□□□ 0.72
RNPS1-225ENST00000569709 WDR97A6NE52 1622 aa19.53■□□□□ 0.72
RNPS1-225ENST00000569709 SNAPC4Q5SXM2 1469 aa19.52■□□□□ 0.72
RNPS1-225ENST00000569709 CUX1P39880 1505 aa19.49■□□□□ 0.71
RNPS1-225ENST00000569709 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
RNPS1-225ENST00000569709 MAGI1Q96QZ7 1491 aaPredicted RBP19.45■□□□□ 0.7
RNPS1-225ENST00000569709 TRHP20396 242 aaPredicted RBP19.44■□□□□ 0.7
RNPS1-225ENST00000569709 SYNJ1O43426 1573 aa19.44■□□□□ 0.7
RNPS1-225ENST00000569709 GRIN2BQ13224 1484 aa19.42■□□□□ 0.7
RNPS1-225ENST00000569709 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
RNPS1-225ENST00000569709 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
RNPS1-225ENST00000569709 SYNJ2O15056 1496 aa19.39■□□□□ 0.69
RNPS1-225ENST00000569709 GAPVD1Q14C86 1478 aa19.34■□□□□ 0.69
RNPS1-225ENST00000569709 ABCA5Q8WWZ7 1642 aa19.32■□□□□ 0.68
RNPS1-225ENST00000569709 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
RNPS1-225ENST00000569709 SUPT5HO00267 1087 aaKnown RBP19.21■□□□□ 0.67
RNPS1-225ENST00000569709 WRNQ14191 1432 aaPredicted RBP eCLIP19.18■□□□□ 0.66
RNPS1-225ENST00000569709 GRIN2AQ12879 1464 aa19.18■□□□□ 0.66
RNPS1-225ENST00000569709 ADAMTS12P58397 1594 aa19.18■□□□□ 0.66
RNPS1-225ENST00000569709 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
RNPS1-225ENST00000569709 ERCC6L2Q5T890 1561 aa19.15■□□□□ 0.66
RNPS1-225ENST00000569709 TOP2BQ02880 1626 aa19.15■□□□□ 0.66
RNPS1-225ENST00000569709 CEP170Q5SW79 1584 aa19.15■□□□□ 0.66
RNPS1-225ENST00000569709 NUP160Q12769 1436 aa19.11■□□□□ 0.65
RNPS1-225ENST00000569709 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.65
RNPS1-225ENST00000569709 SHROOM2Q13796 1616 aa19.07■□□□□ 0.64
RNPS1-225ENST00000569709 ERICH3Q5RHP9 1530 aa19.06■□□□□ 0.64
RNPS1-225ENST00000569709 AEBP2Q6ZN18 517 aaPredicted RBP18.99■□□□□ 0.63
RNPS1-225ENST00000569709 PRG4Q92954 1404 aaPredicted RBP18.94■□□□□ 0.62
RNPS1-225ENST00000569709 KIF13AQ9H1H9 1805 aa18.93■□□□□ 0.62
RNPS1-225ENST00000569709 RUSC2Q8N2Y8 1516 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms