RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 NISCHQ9Y2I1 1504 aa25.77■■□□□ 1.72
PDPK1-201ENST00000268673 DCAF8L2P0C7V8 631 aa25.47■■□□□ 1.67
PDPK1-201ENST00000268673 SUPT5HO00267 1087 aaKnown RBP24.38■■□□□ 1.49
PDPK1-201ENST00000268673 SHROOM4Q9ULL8 1493 aa23.99■■□□□ 1.43
PDPK1-201ENST00000268673 PCGF6Q9BYE7 350 aa23.62■■□□□ 1.37
PDPK1-201ENST00000268673 PELP1Q8IZL8 1130 aaKnown RBP23.47■■□□□ 1.35
PDPK1-201ENST00000268673 HRCP23327 699 aa23.29■■□□□ 1.32
PDPK1-201ENST00000268673 ZEB1P37275 1124 aaPredicted RBP23.25■■□□□ 1.31
PDPK1-201ENST00000268673 EHMT2Q96KQ7 1210 aa23.19■■□□□ 1.3
PDPK1-201ENST00000268673 MYT1Q01538 1121 aa22.96■■□□□ 1.27
PDPK1-201ENST00000268673 CENPBP07199 599 aaPredicted RBP22.93■■□□□ 1.26
PDPK1-201ENST00000268673 TRIM26Q12899 539 aaPredicted RBP22.8■■□□□ 1.24
PDPK1-201ENST00000268673 FAM9AQ8IZU1 332 aaPredicted RBP22.78■■□□□ 1.24
PDPK1-201ENST00000268673 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
PDPK1-201ENST00000268673 APLP2Q06481 763 aa22.68■■□□□ 1.22
PDPK1-201ENST00000268673 CCER1Q8TC90 406 aaPredicted RBP22.64■■□□□ 1.21
PDPK1-201ENST00000268673 TRIM41Q8WV44 630 aa22.64■■□□□ 1.21
PDPK1-201ENST00000268673 PPARGC1BQ86YN6 1023 aaKnown RBP22.61■■□□□ 1.21
PDPK1-201ENST00000268673 LOC105371045A0A1W2PR82 267 aa22.4■■□□□ 1.18
PDPK1-201ENST00000268673 TTBK1Q5TCY1 1321 aaPredicted RBP22.36■■□□□ 1.17
PDPK1-201ENST00000268673 RANGAP1P46060 587 aaPredicted RBP22.24■■□□□ 1.15
PDPK1-201ENST00000268673 YTHDC1Q96MU7 727 aaKnown RBP22.18■■□□□ 1.14
PDPK1-201ENST00000268673 UBTFP17480 764 aaKnown RBP22.06■■□□□ 1.12
PDPK1-201ENST00000268673 ATP1B4Q9UN42 357 aaPredicted RBP21.99■■□□□ 1.11
PDPK1-201ENST00000268673 DIEXFQ68CQ4 756 aaKnown RBP21.95■■□□□ 1.1
PDPK1-201ENST00000268673 ERICH6Q7L0X2 663 aa21.94■■□□□ 1.1
PDPK1-201ENST00000268673 DCAF1Q9Y4B6 1507 aa21.86■■□□□ 1.09
PDPK1-201ENST00000268673 NEFLP07196 543 aa21.85■■□□□ 1.09
PDPK1-201ENST00000268673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.85■■□□□ 1.09
PDPK1-201ENST00000268673 GTF3C3Q9Y5Q9 886 aa21.82■■□□□ 1.08
PDPK1-201ENST00000268673 ACIN1Q9UKV3 1341 aaKnown RBP21.77■■□□□ 1.08
PDPK1-201ENST00000268673 ZCCHC6Q5VYS8 1495 aaKnown RBP21.71■■□□□ 1.07
PDPK1-201ENST00000268673 CCDC180Q9P1Z9 1646 aa21.59■■□□□ 1.05
PDPK1-201ENST00000268673 HNRNPUL2Q1KMD3 747 aaKnown RBP21.55■■□□□ 1.04
PDPK1-201ENST00000268673 SCAF1Q9H7N4 1312 aaKnown RBP21.52■■□□□ 1.04
PDPK1-201ENST00000268673 MYO15BQ96JP2 1530 aa21.5■■□□□ 1.03
PDPK1-201ENST00000268673 ZNF316A6NFI3 1004 aaPredicted RBP21.48■■□□□ 1.03
PDPK1-201ENST00000268673 ABCC9O60706 1549 aa21.37■■□□□ 1.01
PDPK1-201ENST00000268673 NEUROD1Q13562 356 aa21.35■■□□□ 1.01
PDPK1-201ENST00000268673 PABPN1Q86U42 306 aaKnown RBP eCLIP21.3■■□□□ 1
PDPK1-201ENST00000268673 ITGAEP38570 1179 aa21.29■■□□□ 1
PDPK1-201ENST00000268673 CLSPNQ9HAW4 1339 aa21.21■□□□□ 0.99
PDPK1-201ENST00000268673 MYT1LQ9UL68 1186 aa21.08■□□□□ 0.97
PDPK1-201ENST00000268673 BCANQ96GW7 911 aa21.03■□□□□ 0.96
PDPK1-201ENST00000268673 CSRNP3Q8WYN3 585 aa20.96■□□□□ 0.95
PDPK1-201ENST00000268673 POLR3GLQ9BT43 218 aa20.91■□□□□ 0.94
PDPK1-201ENST00000268673 RTL5Q5HYW3 569 aaPredicted RBP20.89■□□□□ 0.93
PDPK1-201ENST00000268673 CDK11AQ9UQ88 783 aaPredicted RBP20.87■□□□□ 0.93
PDPK1-201ENST00000268673 ANP32CO43423 234 aa20.87■□□□□ 0.93
PDPK1-201ENST00000268673 MIER1Q8N108 512 aa20.85■□□□□ 0.93
PDPK1-201ENST00000268673 DAXXQ9UER7 740 aaPredicted RBP20.81■□□□□ 0.92
PDPK1-201ENST00000268673 FAM50AQ14320 339 aaKnown RBP20.78■□□□□ 0.92
PDPK1-201ENST00000268673 CNGB1Q14028 1251 aaPredicted RBP20.73■□□□□ 0.91
PDPK1-201ENST00000268673 FKBP8Q14318 412 aa20.72■□□□□ 0.91
PDPK1-201ENST00000268673 SCRIBQ14160 1630 aa20.69■□□□□ 0.9
PDPK1-201ENST00000268673 RSF1Q96T23 1441 aaPredicted RBP20.66■□□□□ 0.9
PDPK1-201ENST00000268673 TRIM52Q96A61 297 aa20.61■□□□□ 0.89
PDPK1-201ENST00000268673 FBLN2P98095 1184 aa20.61■□□□□ 0.89
PDPK1-201ENST00000268673 ANP32EQ9BTT0 268 aa20.58■□□□□ 0.89
PDPK1-201ENST00000268673 CEP162Q5TB80 1403 aa20.54■□□□□ 0.88
PDPK1-201ENST00000268673 DDX10Q13206 875 aaKnown RBP20.49■□□□□ 0.87
PDPK1-201ENST00000268673 SLC4A1APQ9BWU0 796 aaKnown RBP20.49■□□□□ 0.87
PDPK1-201ENST00000268673 EEA1Q15075 1411 aa20.49■□□□□ 0.87
PDPK1-201ENST00000268673 P3H3Q8IVL6 736 aa20.48■□□□□ 0.87
PDPK1-201ENST00000268673 ANP32AP39687 249 aaKnown RBP20.45■□□□□ 0.86
PDPK1-201ENST00000268673 TNIKQ9UKE5 1360 aa20.44■□□□□ 0.86
PDPK1-201ENST00000268673 CLIP1P30622 1438 aa20.41■□□□□ 0.86
PDPK1-201ENST00000268673 SUPT16HQ9Y5B9 1047 aaKnown RBP20.41■□□□□ 0.86
PDPK1-201ENST00000268673 RB1CC1Q8TDY2 1594 aa20.4■□□□□ 0.86
PDPK1-201ENST00000268673 HNRNPUQ00839 825 aaKnown RBP eCLIP20.39■□□□□ 0.85
PDPK1-201ENST00000268673 GOLGA3Q08378 1498 aa20.38■□□□□ 0.85
PDPK1-201ENST00000268673 ARID3CA6NKF2 412 aa20.36■□□□□ 0.85
PDPK1-201ENST00000268673 ZNF326Q5BKZ1 582 aaKnown RBP20.34■□□□□ 0.85
PDPK1-201ENST00000268673 TONSLQ96HA7 1378 aa20.33■□□□□ 0.85
PDPK1-201ENST00000268673 NACADO15069 1562 aa20.23■□□□□ 0.83
PDPK1-201ENST00000268673 ZNF777Q9ULD5 760 aaPredicted RBP20.18■□□□□ 0.82
PDPK1-201ENST00000268673 BCL11AQ9H165 835 aa20.18■□□□□ 0.82
PDPK1-201ENST00000268673 CEP164Q9UPV0 1460 aa20.16■□□□□ 0.82
PDPK1-201ENST00000268673 ZBTB47Q9UFB7 747 aaPredicted RBP20.15■□□□□ 0.82
PDPK1-201ENST00000268673 FAM9BQ8IZU0 186 aa20.14■□□□□ 0.81
PDPK1-201ENST00000268673 NBR1Q14596 966 aa20.13■□□□□ 0.81
PDPK1-201ENST00000268673 NPM2Q86SE8 214 aaKnown RBP20.13■□□□□ 0.81
PDPK1-201ENST00000268673 CECR2Q9BXF3 1484 aa20.12■□□□□ 0.81
PDPK1-201ENST00000268673 CCDC136Q96JN2 1154 aa20.11■□□□□ 0.81
PDPK1-201ENST00000268673 IRX6P78412 446 aaPredicted RBP20.09■□□□□ 0.81
PDPK1-201ENST00000268673 WRNQ14191 1432 aaPredicted RBP eCLIP20.08■□□□□ 0.81
PDPK1-201ENST00000268673 TSHZ2Q9NRE2 1034 aa20.08■□□□□ 0.8
PDPK1-201ENST00000268673 HIRIP3Q9BW71 556 aaPredicted RBP20.05■□□□□ 0.8
PDPK1-201ENST00000268673 MRS2Q9HD23 443 aa20.04■□□□□ 0.8
PDPK1-201ENST00000268673 RBM19Q9Y4C8 960 aaKnown RBP20.03■□□□□ 0.8
PDPK1-201ENST00000268673 MROH2BQ7Z745 1585 aa20.02■□□□□ 0.79
PDPK1-201ENST00000268673 SOGA1O94964 1423 aa20■□□□□ 0.79
PDPK1-201ENST00000268673 EIF5BO60841 1220 aaKnown RBP19.98■□□□□ 0.79
PDPK1-201ENST00000268673 PPP4R2Q9NY27 417 aa19.96■□□□□ 0.79
PDPK1-201ENST00000268673 VPS8Q8N3P4 1428 aa19.96■□□□□ 0.79
PDPK1-201ENST00000268673 CCER2I3L3R5 266 aa19.96■□□□□ 0.79
PDPK1-201ENST00000268673 EIF4G2P78344 907 aaKnown RBP eCLIP19.94■□□□□ 0.78
PDPK1-201ENST00000268673 BAZ1AQ9NRL2 1556 aaPredicted RBP19.94■□□□□ 0.78
PDPK1-201ENST00000268673 TIMELESSQ9UNS1 1208 aa19.93■□□□□ 0.78
PDPK1-201ENST00000268673 TMC1Q8TDI8 760 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms