RNA–Protein interactions for RNA: ENST00000570136.5

PDPK1-217, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 2

Gene PDPK1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-217ENST00000570136 NISCHQ9Y2I1 1504 aa36.3■■■■□ 3.4
PDPK1-217ENST00000570136 CCDC180Q9P1Z9 1646 aa32.37■■■□□ 2.77
PDPK1-217ENST00000570136 ABCC9O60706 1549 aa31.79■■■□□ 2.68
PDPK1-217ENST00000570136 NACADO15069 1562 aa30.37■■■□□ 2.45
PDPK1-217ENST00000570136 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
PDPK1-217ENST00000570136 MYO15BQ96JP2 1530 aa30.28■■■□□ 2.44
PDPK1-217ENST00000570136 ZCCHC6Q5VYS8 1495 aaKnown RBP30.27■■■□□ 2.44
PDPK1-217ENST00000570136 DCAF1Q9Y4B6 1507 aa30.16■■■□□ 2.42
PDPK1-217ENST00000570136 DCAF8L2P0C7V8 631 aa30.09■■■□□ 2.41
PDPK1-217ENST00000570136 DNAJC5BQ9UF47 199 aa29.95■■■□□ 2.39
PDPK1-217ENST00000570136 UNC13AQ9UPW8 1703 aa29.62■■■□□ 2.33
PDPK1-217ENST00000570136 PABPN1Q86U42 306 aaKnown RBP eCLIP29.57■■■□□ 2.32
PDPK1-217ENST00000570136 SCRIBQ14160 1630 aa29.35■■■□□ 2.29
PDPK1-217ENST00000570136 BICRAQ9NZM4 1560 aa29.34■■■□□ 2.29
PDPK1-217ENST00000570136 SHROOM4Q9ULL8 1493 aa29.27■■■□□ 2.28
PDPK1-217ENST00000570136 CC2D2AQ9P2K1 1620 aa28.68■■■□□ 2.18
PDPK1-217ENST00000570136 CECR2Q9BXF3 1484 aa28.67■■■□□ 2.18
PDPK1-217ENST00000570136 EIF4G1Q04637 1599 aaKnown RBP28.61■■■□□ 2.17
PDPK1-217ENST00000570136 BAZ1AQ9NRL2 1556 aaPredicted RBP28.19■■■□□ 2.1
PDPK1-217ENST00000570136 SMARCA4P51532 1647 aa28.16■■■□□ 2.1
PDPK1-217ENST00000570136 SMARCA2P51531 1590 aa28.02■■■□□ 2.08
PDPK1-217ENST00000570136 NCAPD3P42695 1498 aa27.96■■■□□ 2.07
PDPK1-217ENST00000570136 PEG3Q9GZU2 1588 aa27.95■■■□□ 2.07
PDPK1-217ENST00000570136 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.06
PDPK1-217ENST00000570136 MROH2BQ7Z745 1585 aa27.9■■■□□ 2.06
PDPK1-217ENST00000570136 HMGXB3Q12766 1538 aa27.89■■■□□ 2.06
PDPK1-217ENST00000570136 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.03
PDPK1-217ENST00000570136 DNAJC5Q9H3Z4 198 aa27.63■■■□□ 2.01
PDPK1-217ENST00000570136 RSF1Q96T23 1441 aaPredicted RBP27.63■■■□□ 2.01
PDPK1-217ENST00000570136 WIZO95785 1651 aa27.62■■■□□ 2.01
PDPK1-217ENST00000570136 CUX2O14529 1486 aa27.49■■□□□ 1.99
PDPK1-217ENST00000570136 ERCC6Q03468 1493 aa27.47■■□□□ 1.99
PDPK1-217ENST00000570136 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
PDPK1-217ENST00000570136 LAMC3Q9Y6N6 1575 aa27.26■■□□□ 1.96
PDPK1-217ENST00000570136 NESP48681 1621 aa27.25■■□□□ 1.95
PDPK1-217ENST00000570136 CADPSQ9ULU8 1353 aa27.12■■□□□ 1.93
PDPK1-217ENST00000570136 PDS5BQ9NTI5 1447 aa27.05■■□□□ 1.92
PDPK1-217ENST00000570136 THOC2Q8NI27 1593 aaKnown RBP27.01■■□□□ 1.91
PDPK1-217ENST00000570136 CCDC88BA6NC98 1476 aa27■■□□□ 1.91
PDPK1-217ENST00000570136 CFTRP13569 1480 aa27■■□□□ 1.91
PDPK1-217ENST00000570136 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
PDPK1-217ENST00000570136 KIF21AQ7Z4S6 1674 aa26.91■■□□□ 1.9
PDPK1-217ENST00000570136 SUPT5HO00267 1087 aaKnown RBP26.87■■□□□ 1.89
PDPK1-217ENST00000570136 FANCD2Q9BXW9 1451 aa26.81■■□□□ 1.88
PDPK1-217ENST00000570136 CEP164Q9UPV0 1460 aa26.8■■□□□ 1.88
PDPK1-217ENST00000570136 MRC2Q9UBG0 1479 aa26.74■■□□□ 1.87
PDPK1-217ENST00000570136 WDR62O43379 1518 aa26.66■■□□□ 1.86
PDPK1-217ENST00000570136 ABCC8Q09428 1581 aa26.52■■□□□ 1.84
PDPK1-217ENST00000570136 URB2Q14146 1524 aaKnown RBP26.49■■□□□ 1.83
PDPK1-217ENST00000570136 DNMBPQ6XZF7 1577 aa26.41■■□□□ 1.82
PDPK1-217ENST00000570136 TOPBP1Q92547 1522 aa26.39■■□□□ 1.81
PDPK1-217ENST00000570136 TRIM41Q8WV44 630 aa26.34■■□□□ 1.81
PDPK1-217ENST00000570136 IFT140Q96RY7 1462 aa26.24■■□□□ 1.79
PDPK1-217ENST00000570136 CUX1P39880 1505 aa26.19■■□□□ 1.78
PDPK1-217ENST00000570136 OSCARQ8IYS5 282 aa26.18■■□□□ 1.78
PDPK1-217ENST00000570136 POLA1P09884 1462 aaPredicted RBP26.16■■□□□ 1.78
PDPK1-217ENST00000570136 TARBP1Q13395 1621 aaKnown RBP26.11■■□□□ 1.77
PDPK1-217ENST00000570136 FGD5Q6ZNL6 1462 aa26.11■■□□□ 1.77
PDPK1-217ENST00000570136 WRNQ14191 1432 aaPredicted RBP eCLIP26.09■■□□□ 1.77
PDPK1-217ENST00000570136 BIVM-ERCC5R4GMW8 1640 aa26.08■■□□□ 1.77
PDPK1-217ENST00000570136 WDR97A6NE52 1622 aa26.07■■□□□ 1.76
PDPK1-217ENST00000570136 TOP2BQ02880 1626 aa26.07■■□□□ 1.76
PDPK1-217ENST00000570136 SOGA1O94964 1423 aa26.05■■□□□ 1.76
PDPK1-217ENST00000570136 EIF4G3O43432 1585 aaKnown RBP25.99■■□□□ 1.75
PDPK1-217ENST00000570136 ZNF608Q9ULD9 1512 aaPredicted RBP25.99■■□□□ 1.75
PDPK1-217ENST00000570136 SYNJ1O43426 1573 aa25.99■■□□□ 1.75
PDPK1-217ENST00000570136 RAD54L2Q9Y4B4 1467 aa25.96■■□□□ 1.75
PDPK1-217ENST00000570136 ABCA10Q8WWZ4 1543 aa25.92■■□□□ 1.74
PDPK1-217ENST00000570136 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.733e-6■■■■□ 25.5
PDPK1-217ENST00000570136 RIMBP3CA6NJZ7 1639 aa25.82■■□□□ 1.72
PDPK1-217ENST00000570136 RIMBP3BA6NNM3 1639 aa25.82■■□□□ 1.72
PDPK1-217ENST00000570136 RIMBP3Q9UFD9 1639 aa25.82■■□□□ 1.72
PDPK1-217ENST00000570136 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
PDPK1-217ENST00000570136 ABCA5Q8WWZ7 1642 aa25.81■■□□□ 1.72
PDPK1-217ENST00000570136 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
PDPK1-217ENST00000570136 GAPVD1Q14C86 1478 aa25.78■■□□□ 1.72
PDPK1-217ENST00000570136 ARHGEF11O15085 1522 aa25.78■■□□□ 1.72
PDPK1-217ENST00000570136 PBRM1Q86U86 1689 aa25.76■■□□□ 1.71
PDPK1-217ENST00000570136 MAGI1Q96QZ7 1491 aaPredicted RBP25.75■■□□□ 1.71
PDPK1-217ENST00000570136 SNAPC4Q5SXM2 1469 aa25.68■■□□□ 1.7
PDPK1-217ENST00000570136 CHD1O14646 1710 aa25.65■■□□□ 1.7
PDPK1-217ENST00000570136 ERICH3Q5RHP9 1530 aa25.64■■□□□ 1.7
PDPK1-217ENST00000570136 SYNJ2O15056 1496 aa25.61■■□□□ 1.69
PDPK1-217ENST00000570136 FBLN2P98095 1184 aa25.58■■□□□ 1.69
PDPK1-217ENST00000570136 KIF27Q86VH2 1401 aa25.57■■□□□ 1.68
PDPK1-217ENST00000570136 CYB5RLQ6IPT4 315 aa25.57■■□□□ 1.68
PDPK1-217ENST00000570136 ADAMTS12P58397 1594 aa25.55■■□□□ 1.68
PDPK1-217ENST00000570136 CHMP7Q8WUX9 453 aaPredicted RBP25.52■■□□□ 1.68
PDPK1-217ENST00000570136 ARAP1Q96P48 1450 aa25.52■■□□□ 1.68
PDPK1-217ENST00000570136 FHAD1B1AJZ9 1412 aa25.5■■□□□ 1.67
PDPK1-217ENST00000570136 CUL7Q14999 1698 aa25.46■■□□□ 1.67
PDPK1-217ENST00000570136 GRIN2AQ12879 1464 aa25.44■■□□□ 1.66
PDPK1-217ENST00000570136 CLASP1Q7Z460 1538 aa25.38■■□□□ 1.65
PDPK1-217ENST00000570136 IGF1RP08069 1367 aa25.38■■□□□ 1.65
PDPK1-217ENST00000570136 TRHP20396 242 aaPredicted RBP25.34■■□□□ 1.65
PDPK1-217ENST00000570136 NUP160Q12769 1436 aa25.33■■□□□ 1.65
PDPK1-217ENST00000570136 CEP170Q5SW79 1584 aa25.27■■□□□ 1.64
PDPK1-217ENST00000570136 CARMIL1Q5VZK9 1371 aa25.25■■□□□ 1.63
PDPK1-217ENST00000570136 EEA1Q15075 1411 aa25.22■■□□□ 1.63
PDPK1-217ENST00000570136 RUSC2Q8N2Y8 1516 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms