RNA–Protein interactions for RNA: ENST00000578833.2

LINC01029-202, Transcript of long intergenic non-protein coding RNA 1029, humanhuman

TSL 3 BASIC

Gene LINC01029, Length 366 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01029-202ENST00000578833 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.76
LINC01029-202ENST00000578833 CCDC180Q9P1Z9 1646 aa29.09■■■□□ 2.25
LINC01029-202ENST00000578833 ABCC9O60706 1549 aa29.06■■■□□ 2.24
LINC01029-202ENST00000578833 RB1CC1Q8TDY2 1594 aa27.69■■■□□ 2.02
LINC01029-202ENST00000578833 NACADO15069 1562 aa27.49■■□□□ 1.99
LINC01029-202ENST00000578833 DNAJC5BQ9UF47 199 aa27.39■■□□□ 1.98
LINC01029-202ENST00000578833 MYO15BQ96JP2 1530 aa27.13■■□□□ 1.93
LINC01029-202ENST00000578833 UNC13AQ9UPW8 1703 aa27.13■■□□□ 1.93
LINC01029-202ENST00000578833 DCAF8L2P0C7V8 631 aa27.04■■□□□ 1.92
LINC01029-202ENST00000578833 PABPN1Q86U42 306 aaKnown RBP eCLIP26.97■■□□□ 1.91
LINC01029-202ENST00000578833 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
LINC01029-202ENST00000578833 ZCCHC6Q5VYS8 1495 aaKnown RBP26.73■■□□□ 1.87
LINC01029-202ENST00000578833 DCAF1Q9Y4B6 1507 aa26.72■■□□□ 1.87
LINC01029-202ENST00000578833 SHROOM4Q9ULL8 1493 aa26.6■■□□□ 1.85
LINC01029-202ENST00000578833 SCRIBQ14160 1630 aa26.37■■□□□ 1.81
LINC01029-202ENST00000578833 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
LINC01029-202ENST00000578833 EIF4G1Q04637 1599 aaKnown RBP26.24■■□□□ 1.79
LINC01029-202ENST00000578833 CECR2Q9BXF3 1484 aa26.23■■□□□ 1.79
LINC01029-202ENST00000578833 NCAPD3P42695 1498 aa25.37■■□□□ 1.65
LINC01029-202ENST00000578833 DNAJC5Q9H3Z4 198 aa25.28■■□□□ 1.64
LINC01029-202ENST00000578833 ATAD2BQ9ULI0 1458 aa25.25■■□□□ 1.63
LINC01029-202ENST00000578833 SMARCA4P51532 1647 aa25.21■■□□□ 1.63
LINC01029-202ENST00000578833 HMGXB3Q12766 1538 aa25.19■■□□□ 1.62
LINC01029-202ENST00000578833 CUX2O14529 1486 aa25.19■■□□□ 1.62
LINC01029-202ENST00000578833 SMARCA2P51531 1590 aa25.18■■□□□ 1.62
LINC01029-202ENST00000578833 ERCC6Q03468 1493 aa25.09■■□□□ 1.61
LINC01029-202ENST00000578833 BAZ1AQ9NRL2 1556 aaPredicted RBP25.06■■□□□ 1.6
LINC01029-202ENST00000578833 PEG3Q9GZU2 1588 aa25.04■■□□□ 1.6
LINC01029-202ENST00000578833 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
LINC01029-202ENST00000578833 NESP48681 1621 aa24.95■■□□□ 1.58
LINC01029-202ENST00000578833 MROH2BQ7Z745 1585 aa24.83■■□□□ 1.57
LINC01029-202ENST00000578833 LAMC3Q9Y6N6 1575 aa24.83■■□□□ 1.57
LINC01029-202ENST00000578833 THOC2Q8NI27 1593 aaKnown RBP24.81■■□□□ 1.56
LINC01029-202ENST00000578833 KIF21AQ7Z4S6 1674 aa24.69■■□□□ 1.54
LINC01029-202ENST00000578833 PDS5BQ9NTI5 1447 aa24.63■■□□□ 1.53
LINC01029-202ENST00000578833 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
LINC01029-202ENST00000578833 WIZO95785 1651 aa24.53■■□□□ 1.52
LINC01029-202ENST00000578833 MRC2Q9UBG0 1479 aa24.44■■□□□ 1.5
LINC01029-202ENST00000578833 WDR62O43379 1518 aa24.43■■□□□ 1.5
LINC01029-202ENST00000578833 CEP164Q9UPV0 1460 aa24.31■■□□□ 1.48
LINC01029-202ENST00000578833 CFTRP13569 1480 aa24.27■■□□□ 1.48
LINC01029-202ENST00000578833 RSF1Q96T23 1441 aaPredicted RBP24.27■■□□□ 1.48
LINC01029-202ENST00000578833 FANCD2Q9BXW9 1451 aa24.26■■□□□ 1.47
LINC01029-202ENST00000578833 TOP2AP11388 1531 aaKnown RBP24.23■■□□□ 1.47
LINC01029-202ENST00000578833 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
LINC01029-202ENST00000578833 URB2Q14146 1524 aaKnown RBP24.1■■□□□ 1.45
LINC01029-202ENST00000578833 TRIM41Q8WV44 630 aa23.98■■□□□ 1.43
LINC01029-202ENST00000578833 CCDC88BA6NC98 1476 aa23.92■■□□□ 1.42
LINC01029-202ENST00000578833 OSCARQ8IYS5 282 aa23.91■■□□□ 1.42
LINC01029-202ENST00000578833 IFT140Q96RY7 1462 aa23.83■■□□□ 1.41
LINC01029-202ENST00000578833 TOPBP1Q92547 1522 aa23.8■■□□□ 1.4
LINC01029-202ENST00000578833 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
LINC01029-202ENST00000578833 ABCC8Q09428 1581 aa23.77■■□□□ 1.4
LINC01029-202ENST00000578833 DNMBPQ6XZF7 1577 aa23.72■■□□□ 1.39
LINC01029-202ENST00000578833 RIMBP3CA6NJZ7 1639 aa23.7■■□□□ 1.39
LINC01029-202ENST00000578833 RIMBP3BA6NNM3 1639 aa23.7■■□□□ 1.39
LINC01029-202ENST00000578833 RIMBP3Q9UFD9 1639 aa23.7■■□□□ 1.39
LINC01029-202ENST00000578833 EIF4G3O43432 1585 aaKnown RBP23.7■■□□□ 1.38
LINC01029-202ENST00000578833 TARBP1Q13395 1621 aaKnown RBP23.65■■□□□ 1.38
LINC01029-202ENST00000578833 ARHGEF11O15085 1522 aa23.61■■□□□ 1.37
LINC01029-202ENST00000578833 POLA1P09884 1462 aaPredicted RBP23.56■■□□□ 1.36
LINC01029-202ENST00000578833 CHD1O14646 1710 aa23.55■■□□□ 1.36
LINC01029-202ENST00000578833 AQRO60306 1485 aaKnown RBP eCLIP23.52■■□□□ 1.36
LINC01029-202ENST00000578833 WDR97A6NE52 1622 aa23.44■■□□□ 1.34
LINC01029-202ENST00000578833 RAD54L2Q9Y4B4 1467 aa23.42■■□□□ 1.34
LINC01029-202ENST00000578833 SOGA1O94964 1423 aa23.4■■□□□ 1.34
LINC01029-202ENST00000578833 FGD5Q6ZNL6 1462 aa23.36■■□□□ 1.33
LINC01029-202ENST00000578833 ARAP1Q96P48 1450 aa23.36■■□□□ 1.33
LINC01029-202ENST00000578833 CUX1P39880 1505 aa23.34■■□□□ 1.33
LINC01029-202ENST00000578833 TDRD9Q8NDG6 1382 aaKnown RBP23.34■■□□□ 1.33
LINC01029-202ENST00000578833 CYB5RLQ6IPT4 315 aa23.32■■□□□ 1.32
LINC01029-202ENST00000578833 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
LINC01029-202ENST00000578833 CLASP1Q7Z460 1538 aa23.3■■□□□ 1.32
LINC01029-202ENST00000578833 FBLN2P98095 1184 aa23.29■■□□□ 1.32
LINC01029-202ENST00000578833 MAGI1Q96QZ7 1491 aaPredicted RBP23.29■■□□□ 1.32
LINC01029-202ENST00000578833 GRIN2BQ13224 1484 aa23.24■■□□□ 1.31
LINC01029-202ENST00000578833 SYNJ1O43426 1573 aa23.23■■□□□ 1.31
LINC01029-202ENST00000578833 SYNJ2O15056 1496 aa23.2■■□□□ 1.3
LINC01029-202ENST00000578833 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
LINC01029-202ENST00000578833 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
LINC01029-202ENST00000578833 ABCA5Q8WWZ7 1642 aa23.14■■□□□ 1.29
LINC01029-202ENST00000578833 GAPVD1Q14C86 1478 aa23.13■■□□□ 1.29
LINC01029-202ENST00000578833 ABCA10Q8WWZ4 1543 aa23.13■■□□□ 1.29
LINC01029-202ENST00000578833 TRHP20396 242 aaPredicted RBP23.07■■□□□ 1.28
LINC01029-202ENST00000578833 BIVM-ERCC5R4GMW8 1640 aa22.99■■□□□ 1.27
LINC01029-202ENST00000578833 TOP2BQ02880 1626 aa22.97■■□□□ 1.27
LINC01029-202ENST00000578833 WRNQ14191 1432 aaPredicted RBP eCLIP22.96■■□□□ 1.27
LINC01029-202ENST00000578833 GRIN2AQ12879 1464 aa22.96■■□□□ 1.27
LINC01029-202ENST00000578833 ADAMTS12P58397 1594 aa22.95■■□□□ 1.26
LINC01029-202ENST00000578833 NUP160Q12769 1436 aa22.91■■□□□ 1.26
LINC01029-202ENST00000578833 SUPT5HO00267 1087 aaKnown RBP22.9■■□□□ 1.26
LINC01029-202ENST00000578833 CEP170Q5SW79 1584 aa22.89■■□□□ 1.26
LINC01029-202ENST00000578833 SHROOM2Q13796 1616 aa22.87■■□□□ 1.25
LINC01029-202ENST00000578833 ERCC6L2Q5T890 1561 aa22.87■■□□□ 1.25
LINC01029-202ENST00000578833 ERICH3Q5RHP9 1530 aa22.85■■□□□ 1.25
LINC01029-202ENST00000578833 FHAD1B1AJZ9 1412 aa22.84■■□□□ 1.25
LINC01029-202ENST00000578833 RUSC2Q8N2Y8 1516 aa22.64■■□□□ 1.21
LINC01029-202ENST00000578833 PRG4Q92954 1404 aaPredicted RBP22.63■■□□□ 1.21
LINC01029-202ENST00000578833 KIF13AQ9H1H9 1805 aa22.62■■□□□ 1.21
LINC01029-202ENST00000578833 JPH4Q96JJ6 628 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms