RNA–Protein interactions for RNA: ENST00000578294.1

NUP85-207, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-207ENST00000578294 NISCHQ9Y2I1 1504 aa31.69■■■□□ 2.66
NUP85-207ENST00000578294 CCDC180Q9P1Z9 1646 aa28.26■■■□□ 2.11
NUP85-207ENST00000578294 ABCC9O60706 1549 aa27.68■■■□□ 2.02
NUP85-207ENST00000578294 RB1CC1Q8TDY2 1594 aa26.67■■□□□ 1.86
NUP85-207ENST00000578294 NACADO15069 1562 aa26.61■■□□□ 1.85
NUP85-207ENST00000578294 DCAF8L2P0C7V8 631 aa26.48■■□□□ 1.83
NUP85-207ENST00000578294 MYO15BQ96JP2 1530 aa26.45■■□□□ 1.83
NUP85-207ENST00000578294 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
NUP85-207ENST00000578294 DCAF1Q9Y4B6 1507 aa26.27■■□□□ 1.8
NUP85-207ENST00000578294 UNC13AQ9UPW8 1703 aa25.94■■□□□ 1.74
NUP85-207ENST00000578294 PABPN1Q86U42 306 aaKnown RBP eCLIP25.83■■□□□ 1.73
NUP85-207ENST00000578294 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
NUP85-207ENST00000578294 SCRIBQ14160 1630 aa25.7■■□□□ 1.7
NUP85-207ENST00000578294 SHROOM4Q9ULL8 1493 aa25.66■■□□□ 1.7
NUP85-207ENST00000578294 DNAJC5BQ9UF47 199 aa25.47■■□□□ 1.67
NUP85-207ENST00000578294 EIF4G1Q04637 1599 aaKnown RBP25.14■■□□□ 1.62
NUP85-207ENST00000578294 CC2D2AQ9P2K1 1620 aa25.06■■□□□ 1.6
NUP85-207ENST00000578294 CECR2Q9BXF3 1484 aa24.94■■□□□ 1.58
NUP85-207ENST00000578294 BAZ1AQ9NRL2 1556 aaPredicted RBP24.6■■□□□ 1.53
NUP85-207ENST00000578294 SMARCA4P51532 1647 aa24.6■■□□□ 1.53
NUP85-207ENST00000578294 NCAPD3P42695 1498 aa24.54■■□□□ 1.52
NUP85-207ENST00000578294 SMARCA2P51531 1590 aa24.52■■□□□ 1.52
NUP85-207ENST00000578294 ATAD2BQ9ULI0 1458 aa24.51■■□□□ 1.51
NUP85-207ENST00000578294 HMGXB3Q12766 1538 aa24.42■■□□□ 1.5
NUP85-207ENST00000578294 PEG3Q9GZU2 1588 aa24.4■■□□□ 1.5
NUP85-207ENST00000578294 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
NUP85-207ENST00000578294 BAZ1BQ9UIG0 1483 aaKnown RBP24.32■■□□□ 1.48
NUP85-207ENST00000578294 WIZO95785 1651 aa24.09■■□□□ 1.45
NUP85-207ENST00000578294 RSF1Q96T23 1441 aaPredicted RBP24.07■■□□□ 1.44
NUP85-207ENST00000578294 ERCC6Q03468 1493 aa23.94■■□□□ 1.42
NUP85-207ENST00000578294 LAMC3Q9Y6N6 1575 aa23.92■■□□□ 1.42
NUP85-207ENST00000578294 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.42
NUP85-207ENST00000578294 NESP48681 1621 aa23.89■■□□□ 1.42
NUP85-207ENST00000578294 CADPSQ9ULU8 1353 aa23.82■■□□□ 1.4
NUP85-207ENST00000578294 PDS5BQ9NTI5 1447 aa23.79■■□□□ 1.4
NUP85-207ENST00000578294 CUX2O14529 1486 aa23.76■■□□□ 1.39
NUP85-207ENST00000578294 CFTRP13569 1480 aa23.64■■□□□ 1.38
NUP85-207ENST00000578294 KIF21AQ7Z4S6 1674 aa23.62■■□□□ 1.37
NUP85-207ENST00000578294 THOC2Q8NI27 1593 aaKnown RBP23.61■■□□□ 1.37
NUP85-207ENST00000578294 CCDC88BA6NC98 1476 aa23.58■■□□□ 1.37
NUP85-207ENST00000578294 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
NUP85-207ENST00000578294 FANCD2Q9BXW9 1451 aa23.52■■□□□ 1.36
NUP85-207ENST00000578294 MRC2Q9UBG0 1479 aa23.51■■□□□ 1.35
NUP85-207ENST00000578294 WDR62O43379 1518 aa23.43■■□□□ 1.34
NUP85-207ENST00000578294 PRDM2Q13029 1718 aa23.43■■□□□ 1.34
NUP85-207ENST00000578294 SUPT5HO00267 1087 aaKnown RBP23.33■■□□□ 1.33
NUP85-207ENST00000578294 URB2Q14146 1524 aaKnown RBP23.26■■□□□ 1.31
NUP85-207ENST00000578294 ABCC8Q09428 1581 aa23.21■■□□□ 1.31
NUP85-207ENST00000578294 DNAJC5Q9H3Z4 198 aa23.13■■□□□ 1.29
NUP85-207ENST00000578294 TOPBP1Q92547 1522 aa23.12■■□□□ 1.29
NUP85-207ENST00000578294 DNMBPQ6XZF7 1577 aa23.11■■□□□ 1.29
NUP85-207ENST00000578294 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
NUP85-207ENST00000578294 POLA1P09884 1462 aaPredicted RBP22.92■■□□□ 1.26
NUP85-207ENST00000578294 CUX1P39880 1505 aa22.87■■□□□ 1.25
NUP85-207ENST00000578294 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
NUP85-207ENST00000578294 TARBP1Q13395 1621 aaKnown RBP22.87■■□□□ 1.25
NUP85-207ENST00000578294 SOGA1O94964 1423 aa22.84■■□□□ 1.25
NUP85-207ENST00000578294 FGD5Q6ZNL6 1462 aa22.84■■□□□ 1.25
NUP85-207ENST00000578294 EIF4G3O43432 1585 aaKnown RBP22.81■■□□□ 1.24
NUP85-207ENST00000578294 WDR97A6NE52 1622 aa22.79■■□□□ 1.24
NUP85-207ENST00000578294 RAD54L2Q9Y4B4 1467 aa22.78■■□□□ 1.24
NUP85-207ENST00000578294 AQRO60306 1485 aaKnown RBP eCLIP22.74■■□□□ 1.23
NUP85-207ENST00000578294 OSCARQ8IYS5 282 aa22.74■■□□□ 1.23
NUP85-207ENST00000578294 WRNQ14191 1432 aaPredicted RBP eCLIP22.73■■□□□ 1.23
NUP85-207ENST00000578294 TOP2BQ02880 1626 aa22.69■■□□□ 1.22
NUP85-207ENST00000578294 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
NUP85-207ENST00000578294 TDRD9Q8NDG6 1382 aaKnown RBP22.68■■□□□ 1.22
NUP85-207ENST00000578294 ABCA10Q8WWZ4 1543 aa22.64■■□□□ 1.21
NUP85-207ENST00000578294 SYNJ1O43426 1573 aa22.63■■□□□ 1.21
NUP85-207ENST00000578294 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
NUP85-207ENST00000578294 GAPVD1Q14C86 1478 aa22.58■■□□□ 1.2
NUP85-207ENST00000578294 MAGI1Q96QZ7 1491 aaPredicted RBP22.58■■□□□ 1.2
NUP85-207ENST00000578294 SNAPC4Q5SXM2 1469 aa22.55■■□□□ 1.2
NUP85-207ENST00000578294 ABCA5Q8WWZ7 1642 aa22.54■■□□□ 1.2
NUP85-207ENST00000578294 FBLN2P98095 1184 aa22.52■■□□□ 1.2
NUP85-207ENST00000578294 CHD1O14646 1710 aa22.51■■□□□ 1.19
NUP85-207ENST00000578294 PBRM1Q86U86 1689 aa22.5■■□□□ 1.19
NUP85-207ENST00000578294 CHMP7Q8WUX9 453 aaPredicted RBP22.48■■□□□ 1.19
NUP85-207ENST00000578294 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
NUP85-207ENST00000578294 ERICH3Q5RHP9 1530 aa22.39■■□□□ 1.17
NUP85-207ENST00000578294 ADAMTS12P58397 1594 aa22.33■■□□□ 1.17
NUP85-207ENST00000578294 FHAD1B1AJZ9 1412 aa22.33■■□□□ 1.17
NUP85-207ENST00000578294 ARHGEF11O15085 1522 aa22.33■■□□□ 1.17
NUP85-207ENST00000578294 RIMBP3CA6NJZ7 1639 aa22.33■■□□□ 1.17
NUP85-207ENST00000578294 RIMBP3BA6NNM3 1639 aa22.33■■□□□ 1.17
NUP85-207ENST00000578294 RIMBP3Q9UFD9 1639 aa22.33■■□□□ 1.17
NUP85-207ENST00000578294 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
NUP85-207ENST00000578294 GRIN2AQ12879 1464 aa22.29■■□□□ 1.16
NUP85-207ENST00000578294 KIF27Q86VH2 1401 aa22.29■■□□□ 1.16
NUP85-207ENST00000578294 TRIM41Q8WV44 630 aa22.27■■□□□ 1.16
NUP85-207ENST00000578294 NUP160Q12769 1436 aa22.21■■□□□ 1.15
NUP85-207ENST00000578294 IGF1RP08069 1367 aa22.17■■□□□ 1.14
NUP85-207ENST00000578294 CUL7Q14999 1698 aa22.17■■□□□ 1.14
NUP85-207ENST00000578294 CEP170Q5SW79 1584 aa22.15■■□□□ 1.14
NUP85-207ENST00000578294 ARAP1Q96P48 1450 aa22.12■■□□□ 1.13
NUP85-207ENST00000578294 CYB5RLQ6IPT4 315 aa22.12■■□□□ 1.13
NUP85-207ENST00000578294 CARMIL1Q5VZK9 1371 aa22.05■■□□□ 1.12
NUP85-207ENST00000578294 SHROOM2Q13796 1616 aa22.05■■□□□ 1.12
NUP85-207ENST00000578294 RUSC2Q8N2Y8 1516 aa22.01■■□□□ 1.11
NUP85-207ENST00000578294 KIAA0586Q9BVV6 1533 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms