RNA–Protein interactions for RNA: ENST00000485596.5

PDE8A-205, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,999 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-205ENST00000485596 NISCHQ9Y2I1 1504 aa33.67■■■□□ 2.98
PDE8A-205ENST00000485596 SHROOM4Q9ULL8 1493 aa30.07■■■□□ 2.4
PDE8A-205ENST00000485596 SUPT5HO00267 1087 aaKnown RBP29.73■■■□□ 2.35
PDE8A-205ENST00000485596 DCAF8L2P0C7V8 631 aa29.07■■■□□ 2.24
PDE8A-205ENST00000485596 CHIC1Q5VXU3 224 aa28.67■■■□□ 2.18
PDE8A-205ENST00000485596 PCGF6Q9BYE7 350 aa28.64■■■□□ 2.17
PDE8A-205ENST00000485596 MYO15BQ96JP2 1530 aa28.63■■■□□ 2.17
PDE8A-205ENST00000485596 HRCP23327 699 aa28.54■■■□□ 2.16
PDE8A-205ENST00000485596 ZCCHC6Q5VYS8 1495 aaKnown RBP28.47■■■□□ 2.15
PDE8A-205ENST00000485596 PPARGC1BQ86YN6 1023 aaKnown RBP28.4■■■□□ 2.14
PDE8A-205ENST00000485596 LOC105371045A0A1W2PR82 267 aa28.25■■■□□ 2.11
PDE8A-205ENST00000485596 CCDC180Q9P1Z9 1646 aa27.93■■■□□ 2.06
PDE8A-205ENST00000485596 EHMT2Q96KQ7 1210 aa27.76■■■□□ 2.03
PDE8A-205ENST00000485596 FAM9AQ8IZU1 332 aaPredicted RBP27.63■■■□□ 2.01
PDE8A-205ENST00000485596 TRIM26Q12899 539 aaPredicted RBP27.56■■■□□ 2
PDE8A-205ENST00000485596 DCAF1Q9Y4B6 1507 aa27.53■■■□□ 2
PDE8A-205ENST00000485596 TRIM41Q8WV44 630 aa27.36■■□□□ 1.97
PDE8A-205ENST00000485596 RSF1Q96T23 1441 aaPredicted RBP27.02■■□□□ 1.92
PDE8A-205ENST00000485596 SCRIBQ14160 1630 aa27.02■■□□□ 1.92
PDE8A-205ENST00000485596 ZEB1P37275 1124 aaPredicted RBP26.95■■□□□ 1.9
PDE8A-205ENST00000485596 ABCC9O60706 1549 aa26.9■■□□□ 1.9
PDE8A-205ENST00000485596 TTBK1Q5TCY1 1321 aaPredicted RBP26.9■■□□□ 1.9
PDE8A-205ENST00000485596 RB1CC1Q8TDY2 1594 aa26.83■■□□□ 1.89
PDE8A-205ENST00000485596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.79■■□□□ 1.88
PDE8A-205ENST00000485596 SCAF1Q9H7N4 1312 aaKnown RBP26.78■■□□□ 1.88
PDE8A-205ENST00000485596 CCER1Q8TC90 406 aaPredicted RBP26.65■■□□□ 1.86
PDE8A-205ENST00000485596 CECR2Q9BXF3 1484 aa26.61■■□□□ 1.85
PDE8A-205ENST00000485596 MROH2BQ7Z745 1585 aa26.41■■□□□ 1.82
PDE8A-205ENST00000485596 NEUROD1Q13562 356 aa26.34■■□□□ 1.81
PDE8A-205ENST00000485596 WIZO95785 1651 aa26.29■■□□□ 1.8
PDE8A-205ENST00000485596 PELP1Q8IZL8 1130 aaKnown RBP26.28■■□□□ 1.8
PDE8A-205ENST00000485596 DIEXFQ68CQ4 756 aaKnown RBP26.26■■□□□ 1.79
PDE8A-205ENST00000485596 ACIN1Q9UKV3 1341 aaKnown RBP26.24■■□□□ 1.79
PDE8A-205ENST00000485596 GTF3C3Q9Y5Q9 886 aa26.17■■□□□ 1.78
PDE8A-205ENST00000485596 UBTFP17480 764 aaKnown RBP26.15■■□□□ 1.78
PDE8A-205ENST00000485596 YTHDC1Q96MU7 727 aaKnown RBP26.11■■□□□ 1.77
PDE8A-205ENST00000485596 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
PDE8A-205ENST00000485596 RANGAP1P46060 587 aaPredicted RBP26.02■■□□□ 1.76
PDE8A-205ENST00000485596 CCDC88BA6NC98 1476 aa26.02■■□□□ 1.76
PDE8A-205ENST00000485596 CENPBP07199 599 aaPredicted RBP26.01■■□□□ 1.75
PDE8A-205ENST00000485596 SOGA1O94964 1423 aa25.97■■□□□ 1.75
PDE8A-205ENST00000485596 HNRNPUL2Q1KMD3 747 aaKnown RBP25.97■■□□□ 1.75
PDE8A-205ENST00000485596 NACADO15069 1562 aa25.94■■□□□ 1.74
PDE8A-205ENST00000485596 CEP162Q5TB80 1403 aa25.94■■□□□ 1.74
PDE8A-205ENST00000485596 CSRNP3Q8WYN3 585 aa25.86■■□□□ 1.73
PDE8A-205ENST00000485596 RUSC2Q8N2Y8 1516 aa25.85■■□□□ 1.73
PDE8A-205ENST00000485596 BAZ1AQ9NRL2 1556 aaPredicted RBP25.82■■□□□ 1.72
PDE8A-205ENST00000485596 ZNF316A6NFI3 1004 aaPredicted RBP25.81■■□□□ 1.72
PDE8A-205ENST00000485596 PABPN1Q86U42 306 aaKnown RBP eCLIP25.78■■□□□ 1.72
PDE8A-205ENST00000485596 MIER1Q8N108 512 aa25.7■■□□□ 1.7
PDE8A-205ENST00000485596 TNIKQ9UKE5 1360 aa25.69■■□□□ 1.7
PDE8A-205ENST00000485596 EIF4G1Q04637 1599 aaKnown RBP25.68■■□□□ 1.7
PDE8A-205ENST00000485596 WRNQ14191 1432 aaPredicted RBP eCLIP25.66■■□□□ 1.7
PDE8A-205ENST00000485596 TOP2AP11388 1531 aaKnown RBP25.6■■□□□ 1.69
PDE8A-205ENST00000485596 SMARCA2P51531 1590 aa25.57■■□□□ 1.68
PDE8A-205ENST00000485596 APLP2Q06481 763 aa25.57■■□□□ 1.68
PDE8A-205ENST00000485596 SMARCA4P51532 1647 aa25.5■■□□□ 1.67
PDE8A-205ENST00000485596 GOLGA3Q08378 1498 aa25.46■■□□□ 1.67
PDE8A-205ENST00000485596 CLIP1P30622 1438 aa25.38■■□□□ 1.65
PDE8A-205ENST00000485596 EEA1Q15075 1411 aa25.36■■□□□ 1.65
PDE8A-205ENST00000485596 ITGAEP38570 1179 aa25.27■■□□□ 1.64
PDE8A-205ENST00000485596 CEP164Q9UPV0 1460 aa25.22■■□□□ 1.63
PDE8A-205ENST00000485596 RAPGEF2Q9Y4G8 1499 aa25.21■■□□□ 1.63
PDE8A-205ENST00000485596 SYNJ1O43426 1573 aa25.18■■□□□ 1.62
PDE8A-205ENST00000485596 VPS8Q8N3P4 1428 aa25.17■■□□□ 1.62
PDE8A-205ENST00000485596 UNC13AQ9UPW8 1703 aa25.14■■□□□ 1.62
PDE8A-205ENST00000485596 KANK4Q5T7N3 995 aaPredicted RBP25.13■■□□□ 1.61
PDE8A-205ENST00000485596 MYT1Q01538 1121 aa24.98■■□□□ 1.59
PDE8A-205ENST00000485596 KIF21BO75037 1637 aa24.98■■□□□ 1.59
PDE8A-205ENST00000485596 DHX57Q6P158 1386 aaKnown RBP24.97■■□□□ 1.59
PDE8A-205ENST00000485596 KCNH8Q96L42 1107 aa24.95■■□□□ 1.58
PDE8A-205ENST00000485596 SUPT16HQ9Y5B9 1047 aaKnown RBP24.93■■□□□ 1.58
PDE8A-205ENST00000485596 BAZ1BQ9UIG0 1483 aaKnown RBP24.92■■□□□ 1.58
PDE8A-205ENST00000485596 BCANQ96GW7 911 aa24.9■■□□□ 1.58
PDE8A-205ENST00000485596 BICRAQ9NZM4 1560 aa24.89■■□□□ 1.58
PDE8A-205ENST00000485596 ATAD2BQ9ULI0 1458 aa24.88■■□□□ 1.57
PDE8A-205ENST00000485596 ATP1B4Q9UN42 357 aaPredicted RBP24.84■■□□□ 1.57
PDE8A-205ENST00000485596 HIRIP3Q9BW71 556 aaPredicted RBP24.8■■□□□ 1.56
PDE8A-205ENST00000485596 ARAP1Q96P48 1450 aa24.75■■□□□ 1.55
PDE8A-205ENST00000485596 DDX10Q13206 875 aaKnown RBP24.73■■□□□ 1.55
PDE8A-205ENST00000485596 P3H3Q8IVL6 736 aa24.73■■□□□ 1.55
PDE8A-205ENST00000485596 SIN3AQ96ST3 1273 aa24.71■■□□□ 1.55
PDE8A-205ENST00000485596 FAM50AQ14320 339 aaKnown RBP24.71■■□□□ 1.55
PDE8A-205ENST00000485596 CLSPNQ9HAW4 1339 aa24.7■■□□□ 1.54
PDE8A-205ENST00000485596 CCNB3Q8WWL7 1395 aa24.67■■□□□ 1.54
PDE8A-205ENST00000485596 PEG3Q9GZU2 1588 aa24.66■■□□□ 1.54
PDE8A-205ENST00000485596 TSHZ2Q9NRE2 1034 aa24.65■■□□□ 1.54
PDE8A-205ENST00000485596 TOP2BQ02880 1626 aa24.62■■□□□ 1.53
PDE8A-205ENST00000485596 PRXQ9BXM0 1461 aa24.62■■□□□ 1.53
PDE8A-205ENST00000485596 RAB3GAP2Q9H2M9 1393 aa24.6■■□□□ 1.53
PDE8A-205ENST00000485596 FKBP8Q14318 412 aa24.59■■□□□ 1.53
PDE8A-205ENST00000485596 KIF27Q86VH2 1401 aa24.55■■□□□ 1.52
PDE8A-205ENST00000485596 TRIM52Q96A61 297 aa24.55■■□□□ 1.52
PDE8A-205ENST00000485596 RRBP1Q9P2E9 1410 aaKnown RBP24.53■■□□□ 1.52
PDE8A-205ENST00000485596 ARHGAP35Q9NRY4 1499 aa24.5■■□□□ 1.51
PDE8A-205ENST00000485596 CUX1P39880 1505 aa24.49■■□□□ 1.51
PDE8A-205ENST00000485596 ERICH3Q5RHP9 1530 aa24.46■■□□□ 1.51
PDE8A-205ENST00000485596 CUX2O14529 1486 aa24.38■■□□□ 1.49
PDE8A-205ENST00000485596 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
PDE8A-205ENST00000485596 PHLDB1Q86UU1 1377 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms