RNA–Protein interactions for RNA: ENST00000561024.1

PDE8A-214, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-214ENST00000561024 POTEDQ86YR6 584 aa10.88□□□□□ -0.67
PDE8A-214ENST00000561024 AEBP2Q6ZN18 517 aaPredicted RBP10.48□□□□□ -0.73
PDE8A-214ENST00000561024 CHIC1Q5VXU3 224 aa9.93□□□□□ -0.82
PDE8A-214ENST00000561024 NISCHQ9Y2I1 1504 aa9.72□□□□□ -0.85
PDE8A-214ENST00000561024 SENP3Q9H4L4 574 aaPredicted RBP9.3□□□□□ -0.92
PDE8A-214ENST00000561024 PHF23Q9BUL5 403 aaPredicted RBP8.88□□□□□ -0.99
PDE8A-214ENST00000561024 MSH5O43196 834 aa8.86□□□□□ -0.99
PDE8A-214ENST00000561024 CCDC180Q9P1Z9 1646 aa8.75□□□□□ -1.01
PDE8A-214ENST00000561024 SLC24A1O60721 1099 aa8.74□□□□□ -1.01
PDE8A-214ENST00000561024 FOXD1Q16676 465 aa8.65□□□□□ -1.03
PDE8A-214ENST00000561024 ABCC9O60706 1549 aa8.35□□□□□ -1.07
PDE8A-214ENST00000561024 CACNB1Q02641 598 aaPredicted RBP8.32□□□□□ -1.08
PDE8A-214ENST00000561024 POTEHQ6S545 545 aa8.28□□□□□ -1.08
PDE8A-214ENST00000561024 MYO15BQ96JP2 1530 aa8.19□□□□□ -1.1
PDE8A-214ENST00000561024 NACADO15069 1562 aa8.17□□□□□ -1.1
PDE8A-214ENST00000561024 RB1CC1Q8TDY2 1594 aa8.16□□□□□ -1.1
PDE8A-214ENST00000561024 DCAF1Q9Y4B6 1507 aa8.14□□□□□ -1.11
PDE8A-214ENST00000561024 ZCCHC6Q5VYS8 1495 aaKnown RBP8.13□□□□□ -1.11
PDE8A-214ENST00000561024 DAXXQ9UER7 740 aaPredicted RBP8.02□□□□□ -1.12
PDE8A-214ENST00000561024 MYT1Q01538 1121 aa7.97□□□□□ -1.13
PDE8A-214ENST00000561024 UNC13AQ9UPW8 1703 aa7.96□□□□□ -1.13
PDE8A-214ENST00000561024 SHROOM4Q9ULL8 1493 aa7.95□□□□□ -1.14
PDE8A-214ENST00000561024 HRCP23327 699 aa7.94□□□□□ -1.14
PDE8A-214ENST00000561024 TTBK1Q5TCY1 1321 aaPredicted RBP7.94□□□□□ -1.14
PDE8A-214ENST00000561024 EHMT2Q96KQ7 1210 aa7.91□□□□□ -1.14
PDE8A-214ENST00000561024 BICRAQ9NZM4 1560 aa7.88□□□□□ -1.15
PDE8A-214ENST00000561024 DCAF8L2P0C7V8 631 aa7.86□□□□□ -1.15
PDE8A-214ENST00000561024 PIAS4Q8N2W9 510 aaPredicted RBP7.85□□□□□ -1.15
PDE8A-214ENST00000561024 SUPT5HO00267 1087 aaKnown RBP7.84□□□□□ -1.15
PDE8A-214ENST00000561024 SCRIBQ14160 1630 aa7.84□□□□□ -1.15
PDE8A-214ENST00000561024 PELP1Q8IZL8 1130 aaKnown RBP7.82□□□□□ -1.16
PDE8A-214ENST00000561024 APLP2Q06481 763 aa7.79□□□□□ -1.16
PDE8A-214ENST00000561024 PCGF6Q9BYE7 350 aa7.78□□□□□ -1.16
PDE8A-214ENST00000561024 PRKCSHP14314 528 aaPredicted RBP7.77□□□□□ -1.17
PDE8A-214ENST00000561024 PLPPR3Q6T4P5 718 aa7.77□□□□□ -1.17
PDE8A-214ENST00000561024 NCBP3Q53F19 620 aaKnown RBP7.77□□□□□ -1.17
PDE8A-214ENST00000561024 RTN4Q9NQC3 1192 aaKnown RBP7.76□□□□□ -1.17
PDE8A-214ENST00000561024 ERICH6Q7L0X2 663 aa7.73□□□□□ -1.17
PDE8A-214ENST00000561024 PPARGC1BQ86YN6 1023 aaKnown RBP7.72□□□□□ -1.17
PDE8A-214ENST00000561024 PABPN1Q86U42 306 aaKnown RBP eCLIP7.71□□□□□ -1.18
PDE8A-214ENST00000561024 EIF4G1Q04637 1599 aaKnown RBP7.68□□□□□ -1.18
PDE8A-214ENST00000561024 CC2D2AQ9P2K1 1620 aa7.62□□□□□ -1.19
PDE8A-214ENST00000561024 TRIM26Q12899 539 aaPredicted RBP7.57□□□□□ -1.2
PDE8A-214ENST00000561024 BAZ1AQ9NRL2 1556 aaPredicted RBP7.57□□□□□ -1.2
PDE8A-214ENST00000561024 SMARCA4P51532 1647 aa7.56□□□□□ -1.2
PDE8A-214ENST00000561024 DNAJC5BQ9UF47 199 aa7.56□□□□□ -1.2
PDE8A-214ENST00000561024 AMER1Q5JTC6 1135 aaPredicted RBP7.55□□□□□ -1.2
PDE8A-214ENST00000561024 PEG3Q9GZU2 1588 aa7.55□□□□□ -1.2
PDE8A-214ENST00000561024 CECR2Q9BXF3 1484 aa7.54□□□□□ -1.2
PDE8A-214ENST00000561024 ZEB1P37275 1124 aaPredicted RBP7.53□□□□□ -1.2
PDE8A-214ENST00000561024 SMARCA2P51531 1590 aa7.53□□□□□ -1.2
PDE8A-214ENST00000561024 HMGXB3Q12766 1538 aa7.52□□□□□ -1.21
PDE8A-214ENST00000561024 LOC105371045A0A1W2PR82 267 aa7.52□□□□□ -1.21
PDE8A-214ENST00000561024 ARXQ96QS3 562 aa7.51□□□□□ -1.21
PDE8A-214ENST00000561024 NCAPD3P42695 1498 aa7.5□□□□□ -1.21
PDE8A-214ENST00000561024 ATAD2BQ9ULI0 1458 aa7.48□□□□□ -1.21
PDE8A-214ENST00000561024 SCAF1Q9H7N4 1312 aaKnown RBP7.47□□□□□ -1.21
PDE8A-214ENST00000561024 MROH2BQ7Z745 1585 aa7.45□□□□□ -1.22
PDE8A-214ENST00000561024 BAZ1BQ9UIG0 1483 aaKnown RBP7.42□□□□□ -1.22
PDE8A-214ENST00000561024 TIMELESSQ9UNS1 1208 aa7.42□□□□□ -1.22
PDE8A-214ENST00000561024 KCNA4P22459 653 aa7.39□□□□□ -1.23
PDE8A-214ENST00000561024 WIZO95785 1651 aa7.37□□□□□ -1.23
PDE8A-214ENST00000561024 RSF1Q96T23 1441 aaPredicted RBP7.37□□□□□ -1.23
PDE8A-214ENST00000561024 TOP2AP11388 1531 aaKnown RBP7.36□□□□□ -1.23
PDE8A-214ENST00000561024 RANGAP1P46060 587 aaPredicted RBP7.36□□□□□ -1.23
PDE8A-214ENST00000561024 PLSCR2Q9NRY7 297 aa7.34□□□□□ -1.23
PDE8A-214ENST00000561024 LAMC3Q9Y6N6 1575 aa7.33□□□□□ -1.24
PDE8A-214ENST00000561024 ACIN1Q9UKV3 1341 aaKnown RBP7.33□□□□□ -1.24
PDE8A-214ENST00000561024 EIF5BO60841 1220 aaKnown RBP7.32□□□□□ -1.24
PDE8A-214ENST00000561024 CSRNP3Q8WYN3 585 aa7.3□□□□□ -1.24
PDE8A-214ENST00000561024 TULP1O00294 542 aaPredicted RBP7.29□□□□□ -1.24
PDE8A-214ENST00000561024 NEUROD1Q13562 356 aa7.29□□□□□ -1.24
PDE8A-214ENST00000561024 TRIM41Q8WV44 630 aa7.28□□□□□ -1.24
PDE8A-214ENST00000561024 PRDM2Q13029 1718 aa7.28□□□□□ -1.24
PDE8A-214ENST00000561024 CENPBP07199 599 aaPredicted RBP7.27□□□□□ -1.25
PDE8A-214ENST00000561024 RNF39Q9H2S5 420 aa7.27□□□□□ -1.25
PDE8A-214ENST00000561024 HOMEZQ8IX15 550 aa7.26□□□□□ -1.25
PDE8A-214ENST00000561024 GTF3C3Q9Y5Q9 886 aa7.26□□□□□ -1.25
PDE8A-214ENST00000561024 CADPSQ9ULU8 1353 aa7.24□□□□□ -1.25
PDE8A-214ENST00000561024 FAM9AQ8IZU1 332 aaPredicted RBP7.24□□□□□ -1.25
PDE8A-214ENST00000561024 TAOK2Q9UL54 1235 aa7.24□□□□□ -1.25
PDE8A-214ENST00000561024 CUX2O14529 1486 aa7.23□□□□□ -1.25
PDE8A-214ENST00000561024 CFTRP13569 1480 aa7.23□□□□□ -1.25
PDE8A-214ENST00000561024 KLHL34Q8N239 644 aa7.23□□□□□ -1.25
PDE8A-214ENST00000561024 THOC2Q8NI27 1593 aaKnown RBP7.23□□□□□ -1.25
PDE8A-214ENST00000561024 PDS5BQ9NTI5 1447 aa7.23□□□□□ -1.25
PDE8A-214ENST00000561024 CCER1Q8TC90 406 aaPredicted RBP7.22□□□□□ -1.25
PDE8A-214ENST00000561024 NESP48681 1621 aa7.22□□□□□ -1.25
PDE8A-214ENST00000561024 DIEXFQ68CQ4 756 aaKnown RBP7.22□□□□□ -1.25
PDE8A-214ENST00000561024 ERCC6Q03468 1493 aa7.22□□□□□ -1.25
PDE8A-214ENST00000561024 KIF21AQ7Z4S6 1674 aa7.21□□□□□ -1.25
PDE8A-214ENST00000561024 PPP6R1Q9UPN7 881 aa7.21□□□□□ -1.25
PDE8A-214ENST00000561024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.2□□□□□ -1.26
PDE8A-214ENST00000561024 C1QBPQ07021 282 aaKnown RBP7.2□□□□□ -1.26
PDE8A-214ENST00000561024 CCDC88BA6NC98 1476 aa7.2□□□□□ -1.26
PDE8A-214ENST00000561024 WDR62O43379 1518 aa7.18□□□□□ -1.26
PDE8A-214ENST00000561024 MRC2Q9UBG0 1479 aa7.18□□□□□ -1.26
PDE8A-214ENST00000561024 CEP164Q9UPV0 1460 aa7.18□□□□□ -1.26
PDE8A-214ENST00000561024 FANCD2Q9BXW9 1451 aa7.16□□□□□ -1.26
PDE8A-214ENST00000561024 PODXL2Q9NZ53 605 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms