RNA–Protein interactions for RNA: ENST00000565333.5

RNPS1-214, Transcript of RNA binding protein with serine rich domain 1, humanhuman

TSL 4

Gene RNPS1, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-214ENST00000565333 NISCHQ9Y2I1 1504 aa28.89■■■□□ 2.22
RNPS1-214ENST00000565333 CCDC180Q9P1Z9 1646 aa25.66■■□□□ 1.7
RNPS1-214ENST00000565333 ABCC9O60706 1549 aa24.56■■□□□ 1.52
RNPS1-214ENST00000565333 ZCCHC6Q5VYS8 1495 aaKnown RBP24.12■■□□□ 1.45
RNPS1-214ENST00000565333 MYO15BQ96JP2 1530 aa24.09■■□□□ 1.45
RNPS1-214ENST00000565333 NACADO15069 1562 aa24.07■■□□□ 1.44
RNPS1-214ENST00000565333 DCAF1Q9Y4B6 1507 aa24.06■■□□□ 1.44
RNPS1-214ENST00000565333 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
RNPS1-214ENST00000565333 DCAF8L2P0C7V8 631 aa23.97■■□□□ 1.43
RNPS1-214ENST00000565333 UNC13AQ9UPW8 1703 aa23.27■■□□□ 1.32
RNPS1-214ENST00000565333 SCRIBQ14160 1630 aa23.23■■□□□ 1.31
RNPS1-214ENST00000565333 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
RNPS1-214ENST00000565333 BICRAQ9NZM4 1560 aa23.04■■□□□ 1.28
RNPS1-214ENST00000565333 PABPN1Q86U42 306 aaKnown RBP eCLIP22.97■■□□□ 1.27
RNPS1-214ENST00000565333 EIF4G1Q04637 1599 aaKnown RBP22.5■■□□□ 1.19
RNPS1-214ENST00000565333 BAZ1AQ9NRL2 1556 aaPredicted RBP22.46■■□□□ 1.19
RNPS1-214ENST00000565333 SMARCA4P51532 1647 aa22.33■■□□□ 1.17
RNPS1-214ENST00000565333 CECR2Q9BXF3 1484 aa22.3■■□□□ 1.16
RNPS1-214ENST00000565333 CC2D2AQ9P2K1 1620 aa22.3■■□□□ 1.16
RNPS1-214ENST00000565333 SMARCA2P51531 1590 aa22.25■■□□□ 1.15
RNPS1-214ENST00000565333 PEG3Q9GZU2 1588 aa22.18■■□□□ 1.14
RNPS1-214ENST00000565333 MROH2BQ7Z745 1585 aa22.16■■□□□ 1.14
RNPS1-214ENST00000565333 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
RNPS1-214ENST00000565333 ATAD2BQ9ULI0 1458 aa22.13■■□□□ 1.13
RNPS1-214ENST00000565333 DNAJC5BQ9UF47 199 aa22.1■■□□□ 1.13
RNPS1-214ENST00000565333 RSF1Q96T23 1441 aaPredicted RBP22.08■■□□□ 1.13
RNPS1-214ENST00000565333 HMGXB3Q12766 1538 aa22.08■■□□□ 1.13
RNPS1-214ENST00000565333 BAZ1BQ9UIG0 1483 aaKnown RBP22.02■■□□□ 1.12
RNPS1-214ENST00000565333 WIZO95785 1651 aa21.95■■□□□ 1.1
RNPS1-214ENST00000565333 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
RNPS1-214ENST00000565333 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
RNPS1-214ENST00000565333 LAMC3Q9Y6N6 1575 aa21.55■■□□□ 1.04
RNPS1-214ENST00000565333 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.04
RNPS1-214ENST00000565333 CADPSQ9ULU8 1353 aa21.5■■□□□ 1.03
RNPS1-214ENST00000565333 PDS5BQ9NTI5 1447 aa21.43■■□□□ 1.02
RNPS1-214ENST00000565333 CFTRP13569 1480 aa21.43■■□□□ 1.02
RNPS1-214ENST00000565333 PRDM2Q13029 1718 aa21.35■■□□□ 1.01
RNPS1-214ENST00000565333 ERCC6Q03468 1493 aa21.31■■□□□ 1
RNPS1-214ENST00000565333 NESP48681 1621 aa21.29■■□□□ 1
RNPS1-214ENST00000565333 FANCD2Q9BXW9 1451 aa21.21■□□□□ 0.99
RNPS1-214ENST00000565333 CEP164Q9UPV0 1460 aa21.21■□□□□ 0.99
RNPS1-214ENST00000565333 ABCC8Q09428 1581 aa21.15■□□□□ 0.98
RNPS1-214ENST00000565333 KIF21AQ7Z4S6 1674 aa21.13■□□□□ 0.97
RNPS1-214ENST00000565333 MRC2Q9UBG0 1479 aa21.09■□□□□ 0.97
RNPS1-214ENST00000565333 CUX2O14529 1486 aa21.01■□□□□ 0.95
RNPS1-214ENST00000565333 THOC2Q8NI27 1593 aaKnown RBP20.99■□□□□ 0.95
RNPS1-214ENST00000565333 WDR62O43379 1518 aa20.99■□□□□ 0.95
RNPS1-214ENST00000565333 DNMBPQ6XZF7 1577 aa20.95■□□□□ 0.94
RNPS1-214ENST00000565333 URB2Q14146 1524 aaKnown RBP20.89■□□□□ 0.94
RNPS1-214ENST00000565333 TOPBP1Q92547 1522 aa20.89■□□□□ 0.94
RNPS1-214ENST00000565333 WRNQ14191 1432 aaPredicted RBP eCLIP20.89■□□□□ 0.94
RNPS1-214ENST00000565333 TOP2BQ02880 1626 aa20.81■□□□□ 0.92
RNPS1-214ENST00000565333 CUX1P39880 1505 aa20.79■□□□□ 0.92
RNPS1-214ENST00000565333 BIVM-ERCC5R4GMW8 1640 aa20.79■□□□□ 0.92
RNPS1-214ENST00000565333 IFT140Q96RY7 1462 aa20.78■□□□□ 0.92
RNPS1-214ENST00000565333 POLA1P09884 1462 aaPredicted RBP20.72■□□□□ 0.91
RNPS1-214ENST00000565333 WDR97A6NE52 1622 aa20.71■□□□□ 0.91
RNPS1-214ENST00000565333 SOGA1O94964 1423 aa20.71■□□□□ 0.91
RNPS1-214ENST00000565333 FGD5Q6ZNL6 1462 aa20.71■□□□□ 0.91
RNPS1-214ENST00000565333 SYNJ1O43426 1573 aa20.68■□□□□ 0.9
RNPS1-214ENST00000565333 TRIM41Q8WV44 630 aa20.67■□□□□ 0.9
RNPS1-214ENST00000565333 TARBP1Q13395 1621 aaKnown RBP20.62■□□□□ 0.89
RNPS1-214ENST00000565333 ABCA10Q8WWZ4 1543 aa20.6■□□□□ 0.89
RNPS1-214ENST00000565333 RAD54L2Q9Y4B4 1467 aa20.54■□□□□ 0.88
RNPS1-214ENST00000565333 KIF27Q86VH2 1401 aa20.51■□□□□ 0.87
RNPS1-214ENST00000565333 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
RNPS1-214ENST00000565333 GAPVD1Q14C86 1478 aa20.48■□□□□ 0.87
RNPS1-214ENST00000565333 EIF4G3O43432 1585 aaKnown RBP20.47■□□□□ 0.87
RNPS1-214ENST00000565333 GRIN2BQ13224 1484 aa20.46■□□□□ 0.87
RNPS1-214ENST00000565333 TDRD9Q8NDG6 1382 aaKnown RBP20.46■□□□□ 0.87
RNPS1-214ENST00000565333 ZNF608Q9ULD9 1512 aaPredicted RBP20.44■□□□□ 0.86
RNPS1-214ENST00000565333 ABCA5Q8WWZ7 1642 aa20.43■□□□□ 0.86
RNPS1-214ENST00000565333 EEA1Q15075 1411 aa20.43■□□□□ 0.86
RNPS1-214ENST00000565333 AQRO60306 1485 aaKnown RBP eCLIP20.42■□□□□ 0.861e-6■■■■■ 33.8
RNPS1-214ENST00000565333 ERICH3Q5RHP9 1530 aa20.42■□□□□ 0.86
RNPS1-214ENST00000565333 MAGI1Q96QZ7 1491 aaPredicted RBP20.41■□□□□ 0.86
RNPS1-214ENST00000565333 PBRM1Q86U86 1689 aa20.37■□□□□ 0.85
RNPS1-214ENST00000565333 CUL7Q14999 1698 aa20.32■□□□□ 0.84
RNPS1-214ENST00000565333 FHAD1B1AJZ9 1412 aa20.29■□□□□ 0.84
RNPS1-214ENST00000565333 CHMP7Q8WUX9 453 aaPredicted RBP20.28■□□□□ 0.84
RNPS1-214ENST00000565333 SYNJ2O15056 1496 aa20.28■□□□□ 0.84
RNPS1-214ENST00000565333 SNAPC4Q5SXM2 1469 aa20.28■□□□□ 0.84
RNPS1-214ENST00000565333 IGF1RP08069 1367 aa20.26■□□□□ 0.83
RNPS1-214ENST00000565333 CSRNP3Q8WYN3 585 aa20.22■□□□□ 0.83
RNPS1-214ENST00000565333 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
RNPS1-214ENST00000565333 OSCARQ8IYS5 282 aa20.21■□□□□ 0.83
RNPS1-214ENST00000565333 CARMIL1Q5VZK9 1371 aa20.21■□□□□ 0.83
RNPS1-214ENST00000565333 FBLN2P98095 1184 aa20.19■□□□□ 0.82
RNPS1-214ENST00000565333 GRIN2AQ12879 1464 aa20.15■□□□□ 0.82
RNPS1-214ENST00000565333 CHD1O14646 1710 aa20.14■□□□□ 0.81
RNPS1-214ENST00000565333 RAPGEF2Q9Y4G8 1499 aa20.14■□□□□ 0.81
RNPS1-214ENST00000565333 RUSC2Q8N2Y8 1516 aa20.12■□□□□ 0.81
RNPS1-214ENST00000565333 PRXQ9BXM0 1461 aa20.09■□□□□ 0.81
RNPS1-214ENST00000565333 KIF21BO75037 1637 aa20.05■□□□□ 0.8
RNPS1-214ENST00000565333 NUP160Q12769 1436 aa20.04■□□□□ 0.8
RNPS1-214ENST00000565333 FAM9AQ8IZU1 332 aaPredicted RBP20.03■□□□□ 0.8
RNPS1-214ENST00000565333 KIAA0586Q9BVV6 1533 aa20■□□□□ 0.79
RNPS1-214ENST00000565333 GOLGA3Q08378 1498 aa19.97■□□□□ 0.79
RNPS1-214ENST00000565333 CLASP1Q7Z460 1538 aa19.94■□□□□ 0.78
RNPS1-214ENST00000565333 CEP170Q5SW79 1584 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms