RNA–Protein interactions for RNA: ENST00000337979.8

STX3-201, Transcript of syntaxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STX3, Length 3,299 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX3-201ENST00000337979 NISCHQ9Y2I1 1504 aa33.05■■■□□ 2.88
STX3-201ENST00000337979 SHROOM4Q9ULL8 1493 aa30.62■■■□□ 2.49
STX3-201ENST00000337979 SUPT5HO00267 1087 aaKnown RBP30.48■■■□□ 2.47
STX3-201ENST00000337979 PPARGC1BQ86YN6 1023 aaKnown RBP29.94■■■□□ 2.38
STX3-201ENST00000337979 PCGF6Q9BYE7 350 aa29.93■■■□□ 2.38
STX3-201ENST00000337979 HRCP23327 699 aa29.81■■■□□ 2.36
STX3-201ENST00000337979 DCAF8L2P0C7V8 631 aa29.39■■■□□ 2.29
STX3-201ENST00000337979 MYO15BQ96JP2 1530 aa29.27■■■□□ 2.28
STX3-201ENST00000337979 CHIC1Q5VXU3 224 aa29.24■■■□□ 2.27
STX3-201ENST00000337979 LOC105371045A0A1W2PR82 267 aa29.11■■■□□ 2.25
STX3-201ENST00000337979 EHMT2Q96KQ7 1210 aa28.84■■■□□ 2.21
STX3-201ENST00000337979 FAM9AQ8IZU1 332 aaPredicted RBP28.43■■■□□ 2.14
STX3-201ENST00000337979 TRIM26Q12899 539 aaPredicted RBP28.4■■■□□ 2.14
STX3-201ENST00000337979 SCAF1Q9H7N4 1312 aaKnown RBP28.36■■■□□ 2.13
STX3-201ENST00000337979 PELP1Q8IZL8 1130 aaKnown RBP28.07■■■□□ 2.08
STX3-201ENST00000337979 DCAF1Q9Y4B6 1507 aa28■■■□□ 2.07
STX3-201ENST00000337979 TTBK1Q5TCY1 1321 aaPredicted RBP27.99■■■□□ 2.07
STX3-201ENST00000337979 ZCCHC6Q5VYS8 1495 aaKnown RBP27.95■■■□□ 2.06
STX3-201ENST00000337979 ZEB1P37275 1124 aaPredicted RBP27.83■■■□□ 2.05
STX3-201ENST00000337979 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.82■■■□□ 2.04
STX3-201ENST00000337979 TRIM41Q8WV44 630 aa27.81■■■□□ 2.04
STX3-201ENST00000337979 NEUROD1Q13562 356 aa27.75■■■□□ 2.03
STX3-201ENST00000337979 GTF3C3Q9Y5Q9 886 aa27.66■■■□□ 2.02
STX3-201ENST00000337979 CCER1Q8TC90 406 aaPredicted RBP27.65■■■□□ 2.02
STX3-201ENST00000337979 YTHDC1Q96MU7 727 aaKnown RBP27.58■■■□□ 2
STX3-201ENST00000337979 ACIN1Q9UKV3 1341 aaKnown RBP27.55■■■□□ 2
STX3-201ENST00000337979 CCDC180Q9P1Z9 1646 aa27.54■■■□□ 2
STX3-201ENST00000337979 DIEXFQ68CQ4 756 aaKnown RBP27.39■■□□□ 1.97
STX3-201ENST00000337979 CENPBP07199 599 aaPredicted RBP27.28■■□□□ 1.96
STX3-201ENST00000337979 ABCC9O60706 1549 aa26.9■■□□□ 1.9
STX3-201ENST00000337979 RSF1Q96T23 1441 aaPredicted RBP26.83■■□□□ 1.89
STX3-201ENST00000337979 HNRNPUL2Q1KMD3 747 aaKnown RBP26.78■■□□□ 1.88
STX3-201ENST00000337979 MIER1Q8N108 512 aa26.78■■□□□ 1.88
STX3-201ENST00000337979 RANGAP1P46060 587 aaPredicted RBP26.75■■□□□ 1.87
STX3-201ENST00000337979 RB1CC1Q8TDY2 1594 aa26.74■■□□□ 1.87
STX3-201ENST00000337979 ZNF316A6NFI3 1004 aaPredicted RBP26.69■■□□□ 1.86
STX3-201ENST00000337979 MYT1Q01538 1121 aa26.69■■□□□ 1.86
STX3-201ENST00000337979 SCRIBQ14160 1630 aa26.65■■□□□ 1.86
STX3-201ENST00000337979 UBTFP17480 764 aaKnown RBP26.63■■□□□ 1.85
STX3-201ENST00000337979 CECR2Q9BXF3 1484 aa26.36■■□□□ 1.81
STX3-201ENST00000337979 BCANQ96GW7 911 aa26.31■■□□□ 1.8
STX3-201ENST00000337979 CEP162Q5TB80 1403 aa26.19■■□□□ 1.78
STX3-201ENST00000337979 SUPT16HQ9Y5B9 1047 aaKnown RBP26.12■■□□□ 1.77
STX3-201ENST00000337979 SOGA1O94964 1423 aa26.1■■□□□ 1.77
STX3-201ENST00000337979 MROH2BQ7Z745 1585 aa26.1■■□□□ 1.77
STX3-201ENST00000337979 ABCC8Q09428 1581 aa26.08■■□□□ 1.77
STX3-201ENST00000337979 APLP2Q06481 763 aa26.07■■□□□ 1.76
STX3-201ENST00000337979 CCDC88BA6NC98 1476 aa26.06■■□□□ 1.76
STX3-201ENST00000337979 CSRNP3Q8WYN3 585 aa26.03■■□□□ 1.76
STX3-201ENST00000337979 ITGAEP38570 1179 aa26.03■■□□□ 1.76
STX3-201ENST00000337979 WIZO95785 1651 aa26■■□□□ 1.75
STX3-201ENST00000337979 KCNH8Q96L42 1107 aa25.99■■□□□ 1.75
STX3-201ENST00000337979 PABPN1Q86U42 306 aaKnown RBP eCLIP25.98■■□□□ 1.75
STX3-201ENST00000337979 RUSC2Q8N2Y8 1516 aa25.97■■□□□ 1.75
STX3-201ENST00000337979 TSHZ2Q9NRE2 1034 aa25.94■■□□□ 1.74
STX3-201ENST00000337979 BCL11AQ9H165 835 aa25.82■■□□□ 1.72
STX3-201ENST00000337979 ANP32EQ9BTT0 268 aa25.81■■□□□ 1.72
STX3-201ENST00000337979 FKBP8Q14318 412 aa25.77■■□□□ 1.72
STX3-201ENST00000337979 TNIKQ9UKE5 1360 aa25.77■■□□□ 1.72
STX3-201ENST00000337979 WRNQ14191 1432 aaPredicted RBP eCLIP25.75■■□□□ 1.71
STX3-201ENST00000337979 HIRIP3Q9BW71 556 aaPredicted RBP25.74■■□□□ 1.71
STX3-201ENST00000337979 TRIM52Q96A61 297 aa25.63■■□□□ 1.69
STX3-201ENST00000337979 DDX10Q13206 875 aaKnown RBP25.6■■□□□ 1.69
STX3-201ENST00000337979 CLIP1P30622 1438 aa25.56■■□□□ 1.68
STX3-201ENST00000337979 IRX6P78412 446 aaPredicted RBP25.49■■□□□ 1.67
STX3-201ENST00000337979 KANK4Q5T7N3 995 aaPredicted RBP25.49■■□□□ 1.67
STX3-201ENST00000337979 GOLGA3Q08378 1498 aa25.48■■□□□ 1.67
STX3-201ENST00000337979 NEFLP07196 543 aa25.45■■□□□ 1.66
STX3-201ENST00000337979 RBM19Q9Y4C8 960 aaKnown RBP25.42■■□□□ 1.66
STX3-201ENST00000337979 DHX57Q6P158 1386 aaKnown RBP25.4■■□□□ 1.66
STX3-201ENST00000337979 ATP1B4Q9UN42 357 aaPredicted RBP25.36■■□□□ 1.65
STX3-201ENST00000337979 NACADO15069 1562 aa25.35■■□□□ 1.65
STX3-201ENST00000337979 SIN3AQ96ST3 1273 aa25.35■■□□□ 1.65
STX3-201ENST00000337979 BAZ1AQ9NRL2 1556 aaPredicted RBP25.33■■□□□ 1.65
STX3-201ENST00000337979 VPS8Q8N3P4 1428 aa25.27■■□□□ 1.64
STX3-201ENST00000337979 ERICH6Q7L0X2 663 aa25.27■■□□□ 1.64
STX3-201ENST00000337979 CLSPNQ9HAW4 1339 aa25.26■■□□□ 1.63
STX3-201ENST00000337979 RAPGEF2Q9Y4G8 1499 aa25.25■■□□□ 1.63
STX3-201ENST00000337979 EIF4G1Q04637 1599 aaKnown RBP25.24■■□□□ 1.63
STX3-201ENST00000337979 CNGB1Q14028 1251 aaPredicted RBP25.2■■□□□ 1.62
STX3-201ENST00000337979 FAM50AQ14320 339 aaKnown RBP25.2■■□□□ 1.62
STX3-201ENST00000337979 EEA1Q15075 1411 aa25.18■■□□□ 1.62
STX3-201ENST00000337979 CEP164Q9UPV0 1460 aa25.17■■□□□ 1.62
STX3-201ENST00000337979 SMARCA2P51531 1590 aa25.16■■□□□ 1.62
STX3-201ENST00000337979 MSH5O43196 834 aa25.16■■□□□ 1.62
STX3-201ENST00000337979 TOP2AP11388 1531 aaKnown RBP25.11■■□□□ 1.61
STX3-201ENST00000337979 SENP3-EIF4A1A0A087X0R7 540 aa25.08■■□□□ 1.61
STX3-201ENST00000337979 P3H3Q8IVL6 736 aa25.08■■□□□ 1.61
STX3-201ENST00000337979 ANP32CO43423 234 aa25.07■■□□□ 1.6
STX3-201ENST00000337979 HNRNPUQ00839 825 aaKnown RBP eCLIP25.04■■□□□ 1.6
STX3-201ENST00000337979 KIF21BO75037 1637 aa24.99■■□□□ 1.59
STX3-201ENST00000337979 NBR1Q14596 966 aa24.97■■□□□ 1.59
STX3-201ENST00000337979 RAB3GAP2Q9H2M9 1393 aa24.97■■□□□ 1.59
STX3-201ENST00000337979 SYNJ1O43426 1573 aa24.94■■□□□ 1.58
STX3-201ENST00000337979 CDK11AQ9UQ88 783 aaPredicted RBP24.94■■□□□ 1.58
STX3-201ENST00000337979 CCNB3Q8WWL7 1395 aa24.92■■□□□ 1.58
STX3-201ENST00000337979 SMARCA4P51532 1647 aa24.91■■□□□ 1.58
STX3-201ENST00000337979 B4GALNT3Q6L9W6 998 aa24.84■■□□□ 1.57
STX3-201ENST00000337979 PPP1R15AO75807 674 aaPredicted RBP24.83■■□□□ 1.57
STX3-201ENST00000337979 FAM9BQ8IZU0 186 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms