RNA–Protein interactions for RNA: ENST00000566512.1

USP10-213, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 2

Gene USP10, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-213ENST00000566512 AEBP2Q6ZN18 517 aaPredicted RBP22.25■■□□□ 1.15
USP10-213ENST00000566512 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
USP10-213ENST00000566512 SENP3Q9H4L4 574 aaPredicted RBP19.01■□□□□ 0.63
USP10-213ENST00000566512 PHF23Q9BUL5 403 aaPredicted RBP18.77■□□□□ 0.6
USP10-213ENST00000566512 FOXD1Q16676 465 aa17.67■□□□□ 0.42
USP10-213ENST00000566512 PLPPR3Q6T4P5 718 aa17.09■□□□□ 0.33
USP10-213ENST00000566512 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
USP10-213ENST00000566512 PIAS4Q8N2W9 510 aaPredicted RBP16.59■□□□□ 0.25
USP10-213ENST00000566512 ADRA2BP18089 450 aa16.58■□□□□ 0.24
USP10-213ENST00000566512 MSH5O43196 834 aa16.53■□□□□ 0.24
USP10-213ENST00000566512 POTEDQ86YR6 584 aa15.88■□□□□ 0.13
USP10-213ENST00000566512 SCAF1Q9H7N4 1312 aaKnown RBP15.23■□□□□ 0.03
USP10-213ENST00000566512 MAPK8IP2Q13387 824 aaPredicted RBP15.19■□□□□ 0.02
USP10-213ENST00000566512 DMRT2Q9Y5R5 561 aa15.07■□□□□ 0
USP10-213ENST00000566512 PPP4R3CPQ6ZMV5 832 aa14.99□□□□□ -0.01
USP10-213ENST00000566512 CNKSR2Q8WXI2 1034 aa14.68□□□□□ -0.06
USP10-213ENST00000566512 HOXD11P31277 338 aaPredicted RBP14.57□□□□□ -0.08
USP10-213ENST00000566512 DCAF8L1A6NGE4 600 aa14.51□□□□□ -0.09
USP10-213ENST00000566512 RNF216Q9NWF9 866 aaPredicted RBP14.51□□□□□ -0.09
USP10-213ENST00000566512 NCBP3Q53F19 620 aaKnown RBP14.48□□□□□ -0.09
USP10-213ENST00000566512 NPM3O75607 178 aaKnown RBP14.23□□□□□ -0.13
USP10-213ENST00000566512 CACNB1Q02641 598 aaPredicted RBP14.12□□□□□ -0.15
USP10-213ENST00000566512 RNF39Q9H2S5 420 aa14.09□□□□□ -0.15
USP10-213ENST00000566512 KCNA4P22459 653 aa14.07□□□□□ -0.16
USP10-213ENST00000566512 DNAJC5BQ9UF47 199 aa14.04□□□□□ -0.16
USP10-213ENST00000566512 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.93□□□□□ -0.18
USP10-213ENST00000566512 C1QBPQ07021 282 aaKnown RBP13.91□□□□□ -0.18
USP10-213ENST00000566512 U3KPZ7 1027 aaPredicted RBP13.62□□□□□ -0.23
USP10-213ENST00000566512 SLC4A2P04920 1241 aa13.54□□□□□ -0.24
USP10-213ENST00000566512 CAPN15O75808 1086 aa13.39□□□□□ -0.27
USP10-213ENST00000566512 SPINK5Q9NQ38 1064 aaPredicted RBP13.38□□□□□ -0.27
USP10-213ENST00000566512 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
USP10-213ENST00000566512 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.32□□□□□ -0.28
USP10-213ENST00000566512 HNRNPUL2Q1KMD3 747 aaKnown RBP13.32□□□□□ -0.28
USP10-213ENST00000566512 APLP2Q06481 763 aa13.31□□□□□ -0.28
USP10-213ENST00000566512 DSG3P32926 999 aa13.23□□□□□ -0.29
USP10-213ENST00000566512 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
USP10-213ENST00000566512 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
USP10-213ENST00000566512 ZNF219Q9P2Y4 722 aaPredicted RBP13.19□□□□□ -0.3
USP10-213ENST00000566512 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
USP10-213ENST00000566512 FOXD4L1Q9NU39 408 aa13.12□□□□□ -0.31
USP10-213ENST00000566512 ABCB7O75027 752 aa13.08□□□□□ -0.32
USP10-213ENST00000566512 ZBTB22O15209 634 aa12.92□□□□□ -0.34
USP10-213ENST00000566512 POLA2Q14181 598 aa12.87□□□□□ -0.35
USP10-213ENST00000566512 ATF5Q9Y2D1 282 aaPredicted RBP12.83□□□□□ -0.36
USP10-213ENST00000566512 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
USP10-213ENST00000566512 RBM42Q9BTD8 480 aaKnown RBP12.67□□□□□ -0.38
USP10-213ENST00000566512 ZBTB12Q9Y330 459 aaPredicted RBP12.63□□□□□ -0.39
USP10-213ENST00000566512 POTEHQ6S545 545 aa12.48□□□□□ -0.41
USP10-213ENST00000566512 CSRNP3Q8WYN3 585 aa12.45□□□□□ -0.42
USP10-213ENST00000566512 OSCARQ8IYS5 282 aa12.44□□□□□ -0.42
USP10-213ENST00000566512 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
USP10-213ENST00000566512 FBLN2P98095 1184 aa12.39□□□□□ -0.43
USP10-213ENST00000566512 AKT1S1Q96B36 256 aa12.39□□□□□ -0.43
USP10-213ENST00000566512 CHRDL2Q6WN34 429 aa12.32□□□□□ -0.44
USP10-213ENST00000566512 REM2Q8IYK8 340 aaPredicted RBP12.26□□□□□ -0.45
USP10-213ENST00000566512 MKRN4PQ13434 485 aaPredicted RBP12.25□□□□□ -0.45
USP10-213ENST00000566512 SPDYE2BA6NHP3 402 aa12.23□□□□□ -0.45
USP10-213ENST00000566512 SPDYE6P0CI01 402 aa12.23□□□□□ -0.45
USP10-213ENST00000566512 SPDYE2Q495Y8 402 aa12.23□□□□□ -0.45
USP10-213ENST00000566512 PITPNM1O00562 1244 aa12.13□□□□□ -0.47
USP10-213ENST00000566512 ZNF692Q9BU19 519 aaPredicted RBP12.13□□□□□ -0.47
USP10-213ENST00000566512 SSUH2Q9Y2M2 353 aa12.06□□□□□ -0.48
USP10-213ENST00000566512 PIP4P2Q8N4L2 257 aa12.04□□□□□ -0.48
USP10-213ENST00000566512 SPDYE1Q8NFV5 336 aaPredicted RBP12□□□□□ -0.49
USP10-213ENST00000566512 CLEC11AQ9Y240 323 aa11.99□□□□□ -0.49
USP10-213ENST00000566512 FXR2P51116 673 aaKnown RBP eCLIP11.98□□□□□ -0.494e-8■□□□□ 10.7
USP10-213ENST00000566512 PABPN1Q86U42 306 aaKnown RBP eCLIP11.94□□□□□ -0.5
USP10-213ENST00000566512 HAX1O00165 279 aa11.83□□□□□ -0.52
USP10-213ENST00000566512 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
USP10-213ENST00000566512 PRR29P0C7W0 189 aa11.8□□□□□ -0.52
USP10-213ENST00000566512 SPDYE4A6NLX3 237 aa11.78□□□□□ -0.52
USP10-213ENST00000566512 SP7Q8TDD2 431 aaPredicted RBP11.77□□□□□ -0.53
USP10-213ENST00000566512 CHADLQ6NUI6 762 aa11.73□□□□□ -0.53
USP10-213ENST00000566512 STAG3Q9UJ98 1225 aa11.66□□□□□ -0.54
USP10-213ENST00000566512 EVX2Q03828 476 aa11.63□□□□□ -0.55
USP10-213ENST00000566512 C19orf67A6NJJ6 358 aa11.6□□□□□ -0.55
USP10-213ENST00000566512 FARP1Q9Y4F1 1045 aaPredicted RBP11.56□□□□□ -0.56
USP10-213ENST00000566512 CREBZFQ9NS37 354 aa11.5□□□□□ -0.57
USP10-213ENST00000566512 CD44P16070 742 aaKnown RBP11.47□□□□□ -0.57
USP10-213ENST00000566512 PROM2Q8N271 834 aa11.46□□□□□ -0.57
USP10-213ENST00000566512 GABBR2O75899 941 aa11.41□□□□□ -0.58
USP10-213ENST00000566512 NPM1P06748 294 aaKnown RBP eCLIP11.35□□□□□ -0.59
USP10-213ENST00000566512 FKBP8Q14318 412 aa11.33□□□□□ -0.6
USP10-213ENST00000566512 ZRANB1Q9UGI0 708 aa11.33□□□□□ -0.6
USP10-213ENST00000566512 PAK3O75914 559 aaPredicted RBP11.3□□□□□ -0.6
USP10-213ENST00000566512 MNX1P50219 401 aaPredicted RBP11.3□□□□□ -0.6
USP10-213ENST00000566512 CLCN6P51797 869 aa11.29□□□□□ -0.6
USP10-213ENST00000566512 ZNF579Q8NAF0 562 aaKnown RBP11.28□□□□□ -0.6
USP10-213ENST00000566512 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
USP10-213ENST00000566512 MIER1Q8N108 512 aa11.24□□□□□ -0.61
USP10-213ENST00000566512 PLCD3Q8N3E9 789 aa11.18□□□□□ -0.62
USP10-213ENST00000566512 DCBLD2Q96PD2 775 aa11.17□□□□□ -0.62
USP10-213ENST00000566512 PHF12Q96QT6 1004 aa11.17□□□□□ -0.62
USP10-213ENST00000566512 GALR2O43603 387 aaPredicted RBP11.13□□□□□ -0.63
USP10-213ENST00000566512 POTEIP0CG38 1075 aa11.13□□□□□ -0.63
USP10-213ENST00000566512 TSPYL2Q9H2G4 693 aaPredicted RBP11.13□□□□□ -0.63
USP10-213ENST00000566512 ZBTB47Q9UFB7 747 aaPredicted RBP11.1□□□□□ -0.63
USP10-213ENST00000566512 FBXO3Q9UK99 471 aa11.08□□□□□ -0.64
USP10-213ENST00000566512 LHX8Q68G74 356 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms