RNA–Protein interactions for RNA: ENST00000563023.1

USP10-206, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 4

Gene USP10, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-206ENST00000563023 AEBP2Q6ZN18 517 aaPredicted RBP23.9■■□□□ 1.42
USP10-206ENST00000563023 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
USP10-206ENST00000563023 SENP3Q9H4L4 574 aaPredicted RBP20.61■□□□□ 0.89
USP10-206ENST00000563023 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
USP10-206ENST00000563023 FOXD1Q16676 465 aa19.26■□□□□ 0.67
USP10-206ENST00000563023 POTEDQ86YR6 584 aa19.25■□□□□ 0.67
USP10-206ENST00000563023 MSH5O43196 834 aa18.39■□□□□ 0.53
USP10-206ENST00000563023 PIAS4Q8N2W9 510 aaPredicted RBP17.89■□□□□ 0.45
USP10-206ENST00000563023 PLPPR3Q6T4P5 718 aa17.72■□□□□ 0.43
USP10-206ENST00000563023 PPP6R1Q9UPN7 881 aa17.38■□□□□ 0.37
USP10-206ENST00000563023 ADRA2BP18089 450 aa17.34■□□□□ 0.37
USP10-206ENST00000563023 CACNB1Q02641 598 aaPredicted RBP16.33■□□□□ 0.2
USP10-206ENST00000563023 DMRT2Q9Y5R5 561 aa16.17■□□□□ 0.18
USP10-206ENST00000563023 MAPK8IP2Q13387 824 aaPredicted RBP16.15■□□□□ 0.18
USP10-206ENST00000563023 SCAF1Q9H7N4 1312 aaKnown RBP15.95■□□□□ 0.14
USP10-206ENST00000563023 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
USP10-206ENST00000563023 PPP4R3CPQ6ZMV5 832 aa15.6■□□□□ 0.09
USP10-206ENST00000563023 RNF39Q9H2S5 420 aa15.55■□□□□ 0.08
USP10-206ENST00000563023 C1QBPQ07021 282 aaKnown RBP15.32■□□□□ 0.04
USP10-206ENST00000563023 HOXD11P31277 338 aaPredicted RBP15.24■□□□□ 0.03
USP10-206ENST00000563023 CNKSR2Q8WXI2 1034 aa15.22■□□□□ 0.03
USP10-206ENST00000563023 RNF216Q9NWF9 866 aaPredicted RBP15.03■□□□□ -0
USP10-206ENST00000563023 NCBP3Q53F19 620 aaKnown RBP14.99□□□□□ -0.01
USP10-206ENST00000563023 POTEHQ6S545 545 aa14.96□□□□□ -0.01
USP10-206ENST00000563023 NPM3O75607 178 aaKnown RBP14.85□□□□□ -0.03
USP10-206ENST00000563023 DNAJC5BQ9UF47 199 aa14.83□□□□□ -0.04
USP10-206ENST00000563023 KCNA4P22459 653 aa14.77□□□□□ -0.05
USP10-206ENST00000563023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.68□□□□□ -0.06
USP10-206ENST00000563023 CAPN15O75808 1086 aa14.34□□□□□ -0.11
USP10-206ENST00000563023 DSG3P32926 999 aa14.32□□□□□ -0.12
USP10-206ENST00000563023 SPINK5Q9NQ38 1064 aaPredicted RBP14.22□□□□□ -0.13
USP10-206ENST00000563023 U3KPZ7 1027 aaPredicted RBP14.16□□□□□ -0.14
USP10-206ENST00000563023 SLC4A2P04920 1241 aa14.15□□□□□ -0.14
USP10-206ENST00000563023 SLC4A1APQ9BWU0 796 aaKnown RBP13.95□□□□□ -0.18
USP10-206ENST00000563023 TRHP20396 242 aaPredicted RBP13.93□□□□□ -0.18
USP10-206ENST00000563023 ABCB7O75027 752 aa13.92□□□□□ -0.18
USP10-206ENST00000563023 APLP2Q06481 763 aa13.81□□□□□ -0.2
USP10-206ENST00000563023 ZNF219Q9P2Y4 722 aaPredicted RBP13.81□□□□□ -0.2
USP10-206ENST00000563023 RBM42Q9BTD8 480 aaKnown RBP13.76□□□□□ -0.21
USP10-206ENST00000563023 CHRDL2Q6WN34 429 aa13.74□□□□□ -0.21
USP10-206ENST00000563023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.21
USP10-206ENST00000563023 HNRNPUL2Q1KMD3 747 aaKnown RBP13.71□□□□□ -0.21
USP10-206ENST00000563023 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
USP10-206ENST00000563023 SAMD1Q6SPF0 538 aaPredicted RBP13.67□□□□□ -0.22
USP10-206ENST00000563023 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
USP10-206ENST00000563023 SP7Q8TDD2 431 aaPredicted RBP13.65□□□□□ -0.22
USP10-206ENST00000563023 ZBTB22O15209 634 aa13.61□□□□□ -0.23
USP10-206ENST00000563023 ATF5Q9Y2D1 282 aaPredicted RBP13.46□□□□□ -0.25
USP10-206ENST00000563023 POLA2Q14181 598 aa13.37□□□□□ -0.27
USP10-206ENST00000563023 HAX1O00165 279 aa13.31□□□□□ -0.28
USP10-206ENST00000563023 AKT1S1Q96B36 256 aa13.24□□□□□ -0.29
USP10-206ENST00000563023 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
USP10-206ENST00000563023 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
USP10-206ENST00000563023 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
USP10-206ENST00000563023 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
USP10-206ENST00000563023 EHMT2Q96KQ7 1210 aa13.11□□□□□ -0.31
USP10-206ENST00000563023 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
USP10-206ENST00000563023 PITPNM1O00562 1244 aa12.98□□□□□ -0.33
USP10-206ENST00000563023 FXR2P51116 673 aaKnown RBP eCLIP12.98□□□□□ -0.334e-8■□□□□ 10.7
USP10-206ENST00000563023 OSCARQ8IYS5 282 aa12.95□□□□□ -0.34
USP10-206ENST00000563023 EVX2Q03828 476 aa12.94□□□□□ -0.34
USP10-206ENST00000563023 LHX8Q68G74 356 aa12.83□□□□□ -0.36
USP10-206ENST00000563023 MKRN4PQ13434 485 aaPredicted RBP12.82□□□□□ -0.36
USP10-206ENST00000563023 FBLN2P98095 1184 aa12.81□□□□□ -0.36
USP10-206ENST00000563023 NISCHQ9Y2I1 1504 aa12.81□□□□□ -0.36
USP10-206ENST00000563023 PLSCR2Q9NRY7 297 aa12.78□□□□□ -0.36
USP10-206ENST00000563023 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
USP10-206ENST00000563023 SPDYE2BA6NHP3 402 aa12.66□□□□□ -0.38
USP10-206ENST00000563023 GABBR2O75899 941 aa12.66□□□□□ -0.38
USP10-206ENST00000563023 SPDYE6P0CI01 402 aa12.66□□□□□ -0.38
USP10-206ENST00000563023 SPDYE2Q495Y8 402 aa12.66□□□□□ -0.38
USP10-206ENST00000563023 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
USP10-206ENST00000563023 C19orf67A6NJJ6 358 aa12.6□□□□□ -0.39
USP10-206ENST00000563023 ZNF692Q9BU19 519 aaPredicted RBP12.59□□□□□ -0.39
USP10-206ENST00000563023 SSUH2Q9Y2M2 353 aa12.53□□□□□ -0.4
USP10-206ENST00000563023 SPDYE1Q8NFV5 336 aaPredicted RBP12.51□□□□□ -0.41
USP10-206ENST00000563023 PABPN1Q86U42 306 aaKnown RBP eCLIP12.42□□□□□ -0.42
USP10-206ENST00000563023 CHADLQ6NUI6 762 aa12.37□□□□□ -0.43
USP10-206ENST00000563023 POTEIP0CG38 1075 aa12.31□□□□□ -0.44
USP10-206ENST00000563023 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
USP10-206ENST00000563023 DCBLD2Q96PD2 775 aa12.25□□□□□ -0.45
USP10-206ENST00000563023 PRR29P0C7W0 189 aa12.24□□□□□ -0.45
USP10-206ENST00000563023 CD44P16070 742 aaKnown RBP12.24□□□□□ -0.45
USP10-206ENST00000563023 CLCN6P51797 869 aa12.19□□□□□ -0.46
USP10-206ENST00000563023 POTEMA6NI47 508 aa12.13□□□□□ -0.47
USP10-206ENST00000563023 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
USP10-206ENST00000563023 POTEGQ6S5H5 508 aa12.06□□□□□ -0.48
USP10-206ENST00000563023 OTUD5Q96G74 571 aa12.04□□□□□ -0.48
USP10-206ENST00000563023 STAG3Q9UJ98 1225 aa12.03□□□□□ -0.48
USP10-206ENST00000563023 CREBZFQ9NS37 354 aa11.98□□□□□ -0.49
USP10-206ENST00000563023 PROM2Q8N271 834 aa11.97□□□□□ -0.49
USP10-206ENST00000563023 ZRANB1Q9UGI0 708 aa11.97□□□□□ -0.49
USP10-206ENST00000563023 PCDH10Q9P2E7 1040 aa11.95□□□□□ -0.5
USP10-206ENST00000563023 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
USP10-206ENST00000563023 POTEB2H3BUK9 544 aa11.9□□□□□ -0.5
USP10-206ENST00000563023 FKBP8Q14318 412 aa11.9□□□□□ -0.5
USP10-206ENST00000563023 GALR2O43603 387 aaPredicted RBP11.88□□□□□ -0.51
USP10-206ENST00000563023 MNX1P50219 401 aaPredicted RBP11.8□□□□□ -0.52
USP10-206ENST00000563023 PAK3O75914 559 aaPredicted RBP11.76□□□□□ -0.53
USP10-206ENST00000563023 FAM163AQ96GL9 167 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms