RNA–Protein interactions for RNA: ENST00000339697.4

SERINC1-201, Transcript of serine incorporator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERINC1, Length 3,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERINC1-201ENST00000339697 NISCHQ9Y2I1 1504 aa23.25■■□□□ 1.31
SERINC1-201ENST00000339697 CCDC180Q9P1Z9 1646 aa20.53■□□□□ 0.88
SERINC1-201ENST00000339697 ZCCHC6Q5VYS8 1495 aaKnown RBP19.68■□□□□ 0.74
SERINC1-201ENST00000339697 DCAF1Q9Y4B6 1507 aa19.59■□□□□ 0.73
SERINC1-201ENST00000339697 MYO15BQ96JP2 1530 aa19.33■□□□□ 0.69
SERINC1-201ENST00000339697 NACADO15069 1562 aa18.85■□□□□ 0.61
SERINC1-201ENST00000339697 RB1CC1Q8TDY2 1594 aa18.52■□□□□ 0.56
SERINC1-201ENST00000339697 ABCC9O60706 1549 aa18.51■□□□□ 0.55
SERINC1-201ENST00000339697 UNC13AQ9UPW8 1703 aa18.41■□□□□ 0.54
SERINC1-201ENST00000339697 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
SERINC1-201ENST00000339697 SHROOM4Q9ULL8 1493 aa18.27■□□□□ 0.52
SERINC1-201ENST00000339697 BICRAQ9NZM4 1560 aa18.08■□□□□ 0.48
SERINC1-201ENST00000339697 DCAF8L2P0C7V8 631 aa17.98■□□□□ 0.47
SERINC1-201ENST00000339697 RSF1Q96T23 1441 aaPredicted RBP17.98■□□□□ 0.47
SERINC1-201ENST00000339697 BAZ1AQ9NRL2 1556 aaPredicted RBP17.94■□□□□ 0.46
SERINC1-201ENST00000339697 PEG3Q9GZU2 1588 aa17.93■□□□□ 0.46
SERINC1-201ENST00000339697 SMARCA4P51532 1647 aa17.88■□□□□ 0.45
SERINC1-201ENST00000339697 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
SERINC1-201ENST00000339697 CECR2Q9BXF3 1484 aa17.81■□□□□ 0.44
SERINC1-201ENST00000339697 EIF4G1Q04637 1599 aaKnown RBP17.78■□□□□ 0.44
SERINC1-201ENST00000339697 WIZO95785 1651 aa17.75■□□□□ 0.43
SERINC1-201ENST00000339697 TOP2AP11388 1531 aaKnown RBP17.71■□□□□ 0.43
SERINC1-201ENST00000339697 SUPT5HO00267 1087 aaKnown RBP17.65■□□□□ 0.42
SERINC1-201ENST00000339697 SMARCA2P51531 1590 aa17.53■□□□□ 0.4
SERINC1-201ENST00000339697 HMGXB3Q12766 1538 aa17.45■□□□□ 0.38
SERINC1-201ENST00000339697 CHIC1Q5VXU3 224 aa17.39■□□□□ 0.37
SERINC1-201ENST00000339697 ATAD2BQ9ULI0 1458 aa17.38■□□□□ 0.37
SERINC1-201ENST00000339697 CCDC88BA6NC98 1476 aa17.33■□□□□ 0.36
SERINC1-201ENST00000339697 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
SERINC1-201ENST00000339697 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
SERINC1-201ENST00000339697 BAZ1BQ9UIG0 1483 aaKnown RBP17.18■□□□□ 0.34
SERINC1-201ENST00000339697 PABPN1Q86U42 306 aaKnown RBP eCLIP17.11■□□□□ 0.33
SERINC1-201ENST00000339697 BIVM-ERCC5R4GMW8 1640 aa17.08■□□□□ 0.32
SERINC1-201ENST00000339697 CC2D2AQ9P2K1 1620 aa17■□□□□ 0.31
SERINC1-201ENST00000339697 PELP1Q8IZL8 1130 aaKnown RBP16.97■□□□□ 0.31
SERINC1-201ENST00000339697 TOP2BQ02880 1626 aa16.97■□□□□ 0.31
SERINC1-201ENST00000339697 CFTRP13569 1480 aa16.96■□□□□ 0.31
SERINC1-201ENST00000339697 SYNJ1O43426 1573 aa16.92■□□□□ 0.3
SERINC1-201ENST00000339697 ABCC8Q09428 1581 aa16.92■□□□□ 0.3
SERINC1-201ENST00000339697 EEA1Q15075 1411 aa16.9■□□□□ 0.3
SERINC1-201ENST00000339697 KIF21BO75037 1637 aa16.81■□□□□ 0.28
SERINC1-201ENST00000339697 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
SERINC1-201ENST00000339697 TRIM41Q8WV44 630 aa16.74■□□□□ 0.27
SERINC1-201ENST00000339697 LAMC3Q9Y6N6 1575 aa16.74■□□□□ 0.27
SERINC1-201ENST00000339697 CUX1P39880 1505 aa16.72■□□□□ 0.27
SERINC1-201ENST00000339697 CADPSQ9ULU8 1353 aa16.67■□□□□ 0.26
SERINC1-201ENST00000339697 WDR97A6NE52 1622 aa16.66■□□□□ 0.26
SERINC1-201ENST00000339697 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
SERINC1-201ENST00000339697 DNMBPQ6XZF7 1577 aa16.59■□□□□ 0.25
SERINC1-201ENST00000339697 SOGA1O94964 1423 aa16.58■□□□□ 0.25
SERINC1-201ENST00000339697 MYT1Q01538 1121 aa16.58■□□□□ 0.24
SERINC1-201ENST00000339697 TNIKQ9UKE5 1360 aa16.53■□□□□ 0.24
SERINC1-201ENST00000339697 PRXQ9BXM0 1461 aa16.53■□□□□ 0.24
SERINC1-201ENST00000339697 CEP164Q9UPV0 1460 aa16.53■□□□□ 0.24
SERINC1-201ENST00000339697 RUSC2Q8N2Y8 1516 aa16.53■□□□□ 0.24
SERINC1-201ENST00000339697 GOLGA3Q08378 1498 aa16.52■□□□□ 0.24
SERINC1-201ENST00000339697 LOC105371045A0A1W2PR82 267 aa16.5■□□□□ 0.23
SERINC1-201ENST00000339697 FANCD2Q9BXW9 1451 aa16.47■□□□□ 0.23
SERINC1-201ENST00000339697 KIF21AQ7Z4S6 1674 aa16.45■□□□□ 0.22
SERINC1-201ENST00000339697 ABCA10Q8WWZ4 1543 aa16.44■□□□□ 0.22
SERINC1-201ENST00000339697 ABCA5Q8WWZ7 1642 aa16.42■□□□□ 0.22
SERINC1-201ENST00000339697 TOPBP1Q92547 1522 aa16.41■□□□□ 0.22
SERINC1-201ENST00000339697 CUL7Q14999 1698 aa16.4■□□□□ 0.22
SERINC1-201ENST00000339697 FGD5Q6ZNL6 1462 aa16.38■□□□□ 0.21
SERINC1-201ENST00000339697 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
SERINC1-201ENST00000339697 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
SERINC1-201ENST00000339697 KIF27Q86VH2 1401 aa16.35■□□□□ 0.21
SERINC1-201ENST00000339697 URB2Q14146 1524 aaKnown RBP16.35■□□□□ 0.21
SERINC1-201ENST00000339697 CEP162Q5TB80 1403 aa16.34■□□□□ 0.21
SERINC1-201ENST00000339697 NESP48681 1621 aa16.32■□□□□ 0.2
SERINC1-201ENST00000339697 POLA1P09884 1462 aaPredicted RBP16.32■□□□□ 0.2
SERINC1-201ENST00000339697 RAPGEF2Q9Y4G8 1499 aa16.31■□□□□ 0.2
SERINC1-201ENST00000339697 WDR62O43379 1518 aa16.31■□□□□ 0.2
SERINC1-201ENST00000339697 PDS5BQ9NTI5 1447 aa16.31■□□□□ 0.2
SERINC1-201ENST00000339697 HRCP23327 699 aa16.3■□□□□ 0.2
SERINC1-201ENST00000339697 FAM9AQ8IZU1 332 aaPredicted RBP16.3■□□□□ 0.2
SERINC1-201ENST00000339697 CTTNBP2Q8WZ74 1663 aa16.27■□□□□ 0.2
SERINC1-201ENST00000339697 THOC2Q8NI27 1593 aaKnown RBP16.24■□□□□ 0.19
SERINC1-201ENST00000339697 PBRM1Q86U86 1689 aa16.23■□□□□ 0.19
SERINC1-201ENST00000339697 IGF1RP08069 1367 aa16.22■□□□□ 0.19
SERINC1-201ENST00000339697 MRC2Q9UBG0 1479 aa16.2■□□□□ 0.18
SERINC1-201ENST00000339697 MAP3K1Q13233 1512 aa16.18■□□□□ 0.18
SERINC1-201ENST00000339697 CUX2O14529 1486 aa16.17■□□□□ 0.18
SERINC1-201ENST00000339697 ARAP1Q96P48 1450 aa16.16■□□□□ 0.18
SERINC1-201ENST00000339697 VPS8Q8N3P4 1428 aa16.16■□□□□ 0.18
SERINC1-201ENST00000339697 EFCAB5A4FU69 1503 aa16.13■□□□□ 0.17
SERINC1-201ENST00000339697 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
SERINC1-201ENST00000339697 SAMD9Q5K651 1589 aa16.13■□□□□ 0.17
SERINC1-201ENST00000339697 CLIP1P30622 1438 aa16.11■□□□□ 0.17
SERINC1-201ENST00000339697 TRIM26Q12899 539 aaPredicted RBP16.1■□□□□ 0.17
SERINC1-201ENST00000339697 ADAMTS12P58397 1594 aa16.09■□□□□ 0.17
SERINC1-201ENST00000339697 CFAP43Q8NDM7 1665 aa16.09■□□□□ 0.17
SERINC1-201ENST00000339697 PCGF6Q9BYE7 350 aa16.09■□□□□ 0.17
SERINC1-201ENST00000339697 RAD54L2Q9Y4B4 1467 aa16.08■□□□□ 0.17
SERINC1-201ENST00000339697 ARHGAP35Q9NRY4 1499 aa16.07■□□□□ 0.16
SERINC1-201ENST00000339697 IFT140Q96RY7 1462 aa16.05■□□□□ 0.16
SERINC1-201ENST00000339697 AQRO60306 1485 aaKnown RBP eCLIP16.05■□□□□ 0.166e-6■■■■□ 25.1
SERINC1-201ENST00000339697 CARMIL1Q5VZK9 1371 aa16.03■□□□□ 0.16
SERINC1-201ENST00000339697 DNAJC5BQ9UF47 199 aa16.02■□□□□ 0.15
SERINC1-201ENST00000339697 GAPVD1Q14C86 1478 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms