Protein–RNA interactions for Protein: P63027

VAMP2, Vesicle-associated membrane protein 2, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2P63027 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VAMP2P63027 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
VAMP2P63027 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VAMP2P63027 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VAMP2P63027 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VAMP2P63027 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.15■□□□□ 0.82
VAMP2P63027 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VAMP2P63027 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VAMP2P63027 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
VAMP2P63027 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.15■□□□□ 0.82
VAMP2P63027 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VAMP2P63027 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VAMP2P63027 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
VAMP2P63027 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VAMP2P63027 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.15■□□□□ 0.82
VAMP2P63027 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VAMP2P63027 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
VAMP2P63027 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.14■□□□□ 0.81
VAMP2P63027 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.14■□□□□ 0.81
VAMP2P63027 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
VAMP2P63027 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VAMP2P63027 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.14■□□□□ 0.81
VAMP2P63027 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
VAMP2P63027 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VAMP2P63027 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.14■□□□□ 0.81
VAMP2P63027 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
VAMP2P63027 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.13■□□□□ 0.81
VAMP2P63027 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VAMP2P63027 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
VAMP2P63027 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VAMP2P63027 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.12■□□□□ 0.81
VAMP2P63027 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VAMP2P63027 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VAMP2P63027 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
VAMP2P63027 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VAMP2P63027 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VAMP2P63027 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
VAMP2P63027 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VAMP2P63027 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VAMP2P63027 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VAMP2P63027 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VAMP2P63027 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
VAMP2P63027 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VAMP2P63027 AP004609.3-201ENST00000610705 1884 ntBASIC20.1■□□□□ 0.81
VAMP2P63027 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
VAMP2P63027 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VAMP2P63027 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VAMP2P63027 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
VAMP2P63027 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.09■□□□□ 0.81
VAMP2P63027 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VAMP2P63027 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.09■□□□□ 0.81
VAMP2P63027 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
VAMP2P63027 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
VAMP2P63027 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
VAMP2P63027 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
VAMP2P63027 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VAMP2P63027 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
VAMP2P63027 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
VAMP2P63027 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
VAMP2P63027 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAMP2P63027 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VAMP2P63027 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VAMP2P63027 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VAMP2P63027 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VAMP2P63027 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.06■□□□□ 0.8
VAMP2P63027 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.06■□□□□ 0.8
VAMP2P63027 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.06■□□□□ 0.8
VAMP2P63027 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VAMP2P63027 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
VAMP2P63027 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAMP2P63027 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAMP2P63027 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.05■□□□□ 0.8
VAMP2P63027 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VAMP2P63027 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
VAMP2P63027 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAMP2P63027 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAMP2P63027 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
VAMP2P63027 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
VAMP2P63027 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VAMP2P63027 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VAMP2P63027 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VAMP2P63027 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.03■□□□□ 0.8
VAMP2P63027 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VAMP2P63027 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
VAMP2P63027 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VAMP2P63027 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VAMP2P63027 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VAMP2P63027 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.02■□□□□ 0.8
VAMP2P63027 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
VAMP2P63027 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
VAMP2P63027 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VAMP2P63027 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VAMP2P63027 RARRES2P7-201ENST00000567349 469 ntBASIC20.01■□□□□ 0.79
VAMP2P63027 SETD8P1-201ENST00000623146 1180 ntBASIC20.01■□□□□ 0.79
VAMP2P63027 AC135983.2-203ENST00000454486 1613 ntBASIC20.01■□□□□ 0.79
VAMP2P63027 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VAMP2P63027 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.01■□□□□ 0.79
VAMP2P63027 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VAMP2P63027 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VAMP2P63027 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms