RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 DCAF8L2P0C7V8 631 aa36.06■■■■□ 3.36
CACNA1B-201ENST00000277549 EHMT2Q96KQ7 1210 aa33.86■■■■□ 3.01
CACNA1B-201ENST00000277549 SUPT5HO00267 1087 aaKnown RBP33.35■■■□□ 2.93
CACNA1B-201ENST00000277549 SHROOM4Q9ULL8 1493 aa32.67■■■□□ 2.82
CACNA1B-201ENST00000277549 TTBK1Q5TCY1 1321 aaPredicted RBP32.56■■■□□ 2.8
CACNA1B-201ENST00000277549 PELP1Q8IZL8 1130 aaKnown RBP32.2■■■□□ 2.75
CACNA1B-201ENST00000277549 RANGAP1P46060 587 aaPredicted RBP32.2■■■□□ 2.74
CACNA1B-201ENST00000277549 APLP2Q06481 763 aa32.17■■■□□ 2.74
CACNA1B-201ENST00000277549 FAM9AQ8IZU1 332 aaPredicted RBP31.94■■■□□ 2.7
CACNA1B-201ENST00000277549 ATP1B4Q9UN42 357 aaPredicted RBP31.88■■■□□ 2.69
CACNA1B-201ENST00000277549 ERICH6Q7L0X2 663 aa31.62■■■□□ 2.65
CACNA1B-201ENST00000277549 PCGF6Q9BYE7 350 aa31.37■■■□□ 2.61
CACNA1B-201ENST00000277549 CHIC1Q5VXU3 224 aa31.14■■■□□ 2.58
CACNA1B-201ENST00000277549 MYT1LQ9UL68 1186 aa31.05■■■□□ 2.56
CACNA1B-201ENST00000277549 YTHDC1Q96MU7 727 aaKnown RBP30.9■■■□□ 2.54
CACNA1B-201ENST00000277549 CCER1Q8TC90 406 aaPredicted RBP30.88■■■□□ 2.53
CACNA1B-201ENST00000277549 MYT1Q01538 1121 aa30.81■■■□□ 2.52
CACNA1B-201ENST00000277549 POLR3GLQ9BT43 218 aa30.75■■■□□ 2.51
CACNA1B-201ENST00000277549 CNGB1Q14028 1251 aaPredicted RBP30.74■■■□□ 2.51
CACNA1B-201ENST00000277549 PPARGC1BQ86YN6 1023 aaKnown RBP30.64■■■□□ 2.5
CACNA1B-201ENST00000277549 UBTFP17480 764 aaKnown RBP30.64■■■□□ 2.5
CACNA1B-201ENST00000277549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.51■■■□□ 2.48
CACNA1B-201ENST00000277549 HNRNPUL2Q1KMD3 747 aaKnown RBP30.51■■■□□ 2.48
CACNA1B-201ENST00000277549 CENPBP07199 599 aaPredicted RBP30.5■■■□□ 2.47
CACNA1B-201ENST00000277549 NEFLP07196 543 aa30.49■■■□□ 2.47
CACNA1B-201ENST00000277549 SLC4A1APQ9BWU0 796 aaKnown RBP30.45■■■□□ 2.46
CACNA1B-201ENST00000277549 TRIM41Q8WV44 630 aa30.42■■■□□ 2.46
CACNA1B-201ENST00000277549 ITGAEP38570 1179 aa30.34■■■□□ 2.45
CACNA1B-201ENST00000277549 NISCHQ9Y2I1 1504 aa30.21■■■□□ 2.43
CACNA1B-201ENST00000277549 DAXXQ9UER7 740 aaPredicted RBP30.18■■■□□ 2.42
CACNA1B-201ENST00000277549 ZEB1P37275 1124 aaPredicted RBP29.76■■■□□ 2.35
CACNA1B-201ENST00000277549 BCL11AQ9H165 835 aa29.76■■■□□ 2.35
CACNA1B-201ENST00000277549 SLC24A1O60721 1099 aa29.69■■■□□ 2.34
CACNA1B-201ENST00000277549 CLSPNQ9HAW4 1339 aa29.62■■■□□ 2.33
CACNA1B-201ENST00000277549 PLPPR3Q6T4P5 718 aa29.57■■■□□ 2.32
CACNA1B-201ENST00000277549 ZNF316A6NFI3 1004 aaPredicted RBP29.46■■■□□ 2.31
CACNA1B-201ENST00000277549 BCANQ96GW7 911 aa29.34■■■□□ 2.29
CACNA1B-201ENST00000277549 ZNF326Q5BKZ1 582 aaKnown RBP29.18■■■□□ 2.26
CACNA1B-201ENST00000277549 TRIM52Q96A61 297 aa29.17■■■□□ 2.26
CACNA1B-201ENST00000277549 FAM50AQ14320 339 aaKnown RBP29.14■■■□□ 2.26
CACNA1B-201ENST00000277549 FBLN2P98095 1184 aa29.09■■■□□ 2.25
CACNA1B-201ENST00000277549 NEUROD1Q13562 356 aa29.03■■■□□ 2.24
CACNA1B-201ENST00000277549 RTL5Q5HYW3 569 aaPredicted RBP28.99■■■□□ 2.23
CACNA1B-201ENST00000277549 ZBTB47Q9UFB7 747 aaPredicted RBP28.98■■■□□ 2.23
CACNA1B-201ENST00000277549 LOC105371045A0A1W2PR82 267 aa28.93■■■□□ 2.22
CACNA1B-201ENST00000277549 ARID3CA6NKF2 412 aa28.92■■■□□ 2.22
CACNA1B-201ENST00000277549 TRIM26Q12899 539 aaPredicted RBP28.84■■■□□ 2.21
CACNA1B-201ENST00000277549 CANXP27824 592 aaKnown RBP28.79■■■□□ 2.2
CACNA1B-201ENST00000277549 HRCP23327 699 aa28.75■■■□□ 2.19
CACNA1B-201ENST00000277549 PLEKHG5O94827 1062 aa28.68■■■□□ 2.18
CACNA1B-201ENST00000277549 PABPN1Q86U42 306 aaKnown RBP eCLIP28.63■■■□□ 2.17
CACNA1B-201ENST00000277549 A0A0G2JS52 829 aa28.62■■■□□ 2.17
CACNA1B-201ENST00000277549 SENP3Q9H4L4 574 aaPredicted RBP28.56■■■□□ 2.16
CACNA1B-201ENST00000277549 SCAF1Q9H7N4 1312 aaKnown RBP28.53■■■□□ 2.16
CACNA1B-201ENST00000277549 NEFMP07197 916 aa28.48■■■□□ 2.15
CACNA1B-201ENST00000277549 ZNF777Q9ULD5 760 aaPredicted RBP28.43■■■□□ 2.14
CACNA1B-201ENST00000277549 ESF1Q9H501 851 aaKnown RBP28.42■■■□□ 2.14
CACNA1B-201ENST00000277549 P3H3Q8IVL6 736 aa28.41■■■□□ 2.14
CACNA1B-201ENST00000277549 CHGAP10645 457 aaKnown RBP28.41■■■□□ 2.14
CACNA1B-201ENST00000277549 DIEXFQ68CQ4 756 aaKnown RBP28.37■■■□□ 2.13
CACNA1B-201ENST00000277549 STAG3Q9UJ98 1225 aa28.35■■■□□ 2.13
CACNA1B-201ENST00000277549 NPM2Q86SE8 214 aaKnown RBP28.35■■■□□ 2.13
CACNA1B-201ENST00000277549 ZBTB7CA1YPR0 619 aa28.25■■■□□ 2.11
CACNA1B-201ENST00000277549 ANP32CO43423 234 aa28.24■■■□□ 2.11
CACNA1B-201ENST00000277549 CDK11AQ9UQ88 783 aaPredicted RBP28.16■■■□□ 2.1
CACNA1B-201ENST00000277549 SALL2Q9Y467 1007 aaPredicted RBP28.07■■■□□ 2.08
CACNA1B-201ENST00000277549 TULP1O00294 542 aaPredicted RBP28.03■■■□□ 2.08
CACNA1B-201ENST00000277549 HSP90AA1P07900 732 aaKnown RBP28.01■■■□□ 2.07
CACNA1B-201ENST00000277549 ARXQ96QS3 562 aa28■■■□□ 2.07
CACNA1B-201ENST00000277549 ABCC9O60706 1549 aa27.91■■■□□ 2.06
CACNA1B-201ENST00000277549 C14orf37Q86TY3 774 aa27.9■■■□□ 2.06
CACNA1B-201ENST00000277549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.87■■■□□ 2.05
CACNA1B-201ENST00000277549 GTF3C3Q9Y5Q9 886 aa27.86■■■□□ 2.05
CACNA1B-201ENST00000277549 EIF5BO60841 1220 aaKnown RBP27.8■■■□□ 2.04
CACNA1B-201ENST00000277549 ANP32AP39687 249 aaKnown RBP27.76■■■□□ 2.03
CACNA1B-201ENST00000277549 NPM1P06748 294 aaKnown RBP eCLIP27.72■■■□□ 2.03
CACNA1B-201ENST00000277549 ANP32BQ92688 251 aaKnown RBP27.72■■■□□ 2.03
CACNA1B-201ENST00000277549 CDK11BP21127 795 aaKnown RBP27.69■■■□□ 2.02
CACNA1B-201ENST00000277549 FAM9BQ8IZU0 186 aa27.64■■■□□ 2.02
CACNA1B-201ENST00000277549 TAOK2Q9UL54 1235 aa27.64■■■□□ 2.02
CACNA1B-201ENST00000277549 TPRNQ4KMQ1 711 aa27.64■■■□□ 2.02
CACNA1B-201ENST00000277549 HAP1P54257 671 aaPredicted RBP27.63■■■□□ 2.01
CACNA1B-201ENST00000277549 NCBP3Q53F19 620 aaKnown RBP27.62■■■□□ 2.01
CACNA1B-201ENST00000277549 KDM2AQ9Y2K7 1162 aa27.55■■■□□ 2
CACNA1B-201ENST00000277549 CHIC2Q9UKJ5 165 aa27.53■■■□□ 2
CACNA1B-201ENST00000277549 UPF2Q9HAU5 1272 aaKnown RBP27.48■■□□□ 1.99
CACNA1B-201ENST00000277549 SENP3-EIF4A1A0A087X0R7 540 aa27.46■■□□□ 1.99
CACNA1B-201ENST00000277549 NBR1Q14596 966 aa27.45■■□□□ 1.98
CACNA1B-201ENST00000277549 FKBP8Q14318 412 aa27.43■■□□□ 1.98
CACNA1B-201ENST00000277549 ARID4BQ4LE39 1312 aaPredicted RBP27.41■■□□□ 1.98
CACNA1B-201ENST00000277549 NPHP1O15259 732 aa27.38■■□□□ 1.97
CACNA1B-201ENST00000277549 PPP1R15AO75807 674 aaPredicted RBP27.36■■□□□ 1.97
CACNA1B-201ENST00000277549 HNRNPUQ00839 825 aaKnown RBP eCLIP27.36■■□□□ 1.97
CACNA1B-201ENST00000277549 WDR43Q15061 677 aaKnown RBP eCLIP27.33■■□□□ 1.97
CACNA1B-201ENST00000277549 LMOD2Q6P5Q4 547 aa27.33■■□□□ 1.97
CACNA1B-201ENST00000277549 IRX6P78412 446 aaPredicted RBP27.29■■□□□ 1.96
CACNA1B-201ENST00000277549 PPM1GO15355 546 aaPredicted RBP27.25■■□□□ 1.95
CACNA1B-201ENST00000277549 KCNH8Q96L42 1107 aa27.25■■□□□ 1.95
CACNA1B-201ENST00000277549 DDX10Q13206 875 aaKnown RBP27.25■■□□□ 1.95
CACNA1B-201ENST00000277549 MYH16Q9H6N6 1097 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms