RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 DCAF8L2P0C7V8 631 aa36.06■■■■□ 3.36
CACNA1B-201ENST00000277549 EHMT2Q96KQ7 1210 aa33.86■■■■□ 3.01
CACNA1B-201ENST00000277549 SUPT5HO00267 1087 aaKnown RBP33.35■■■□□ 2.93
CACNA1B-201ENST00000277549 SHROOM4Q9ULL8 1493 aa32.67■■■□□ 2.82
CACNA1B-201ENST00000277549 TTBK1Q5TCY1 1321 aaPredicted RBP32.56■■■□□ 2.8
CACNA1B-201ENST00000277549 PELP1Q8IZL8 1130 aaKnown RBP32.2■■■□□ 2.75
CACNA1B-201ENST00000277549 RANGAP1P46060 587 aaPredicted RBP32.2■■■□□ 2.74
CACNA1B-201ENST00000277549 APLP2Q06481 763 aa32.17■■■□□ 2.74
CACNA1B-201ENST00000277549 FAM9AQ8IZU1 332 aaPredicted RBP31.94■■■□□ 2.7
CACNA1B-201ENST00000277549 ATP1B4Q9UN42 357 aaPredicted RBP31.88■■■□□ 2.69
CACNA1B-201ENST00000277549 ERICH6Q7L0X2 663 aa31.62■■■□□ 2.65
CACNA1B-201ENST00000277549 PCGF6Q9BYE7 350 aa31.37■■■□□ 2.61
CACNA1B-201ENST00000277549 CHIC1Q5VXU3 224 aa31.14■■■□□ 2.58
CACNA1B-201ENST00000277549 MYT1LQ9UL68 1186 aa31.05■■■□□ 2.56
CACNA1B-201ENST00000277549 YTHDC1Q96MU7 727 aaKnown RBP30.9■■■□□ 2.54
CACNA1B-201ENST00000277549 CCER1Q8TC90 406 aaPredicted RBP30.88■■■□□ 2.53
CACNA1B-201ENST00000277549 MYT1Q01538 1121 aa30.81■■■□□ 2.52
CACNA1B-201ENST00000277549 POLR3GLQ9BT43 218 aa30.75■■■□□ 2.51
CACNA1B-201ENST00000277549 CNGB1Q14028 1251 aaPredicted RBP30.74■■■□□ 2.51
CACNA1B-201ENST00000277549 PPARGC1BQ86YN6 1023 aaKnown RBP30.64■■■□□ 2.5
CACNA1B-201ENST00000277549 UBTFP17480 764 aaKnown RBP30.64■■■□□ 2.5
CACNA1B-201ENST00000277549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.51■■■□□ 2.48
CACNA1B-201ENST00000277549 HNRNPUL2Q1KMD3 747 aaKnown RBP30.51■■■□□ 2.48
CACNA1B-201ENST00000277549 CENPBP07199 599 aaPredicted RBP30.5■■■□□ 2.47
CACNA1B-201ENST00000277549 NEFLP07196 543 aa30.49■■■□□ 2.47
CACNA1B-201ENST00000277549 SLC4A1APQ9BWU0 796 aaKnown RBP30.45■■■□□ 2.46
CACNA1B-201ENST00000277549 TRIM41Q8WV44 630 aa30.42■■■□□ 2.46
CACNA1B-201ENST00000277549 ITGAEP38570 1179 aa30.34■■■□□ 2.45
CACNA1B-201ENST00000277549 NISCHQ9Y2I1 1504 aa30.21■■■□□ 2.43
CACNA1B-201ENST00000277549 DAXXQ9UER7 740 aaPredicted RBP30.18■■■□□ 2.42
CACNA1B-201ENST00000277549 ZEB1P37275 1124 aaPredicted RBP29.76■■■□□ 2.35
CACNA1B-201ENST00000277549 BCL11AQ9H165 835 aa29.76■■■□□ 2.35
CACNA1B-201ENST00000277549 SLC24A1O60721 1099 aa29.69■■■□□ 2.34
CACNA1B-201ENST00000277549 CLSPNQ9HAW4 1339 aa29.62■■■□□ 2.33
CACNA1B-201ENST00000277549 PLPPR3Q6T4P5 718 aa29.57■■■□□ 2.32
CACNA1B-201ENST00000277549 ZNF316A6NFI3 1004 aaPredicted RBP29.46■■■□□ 2.31
CACNA1B-201ENST00000277549 BCANQ96GW7 911 aa29.34■■■□□ 2.29
CACNA1B-201ENST00000277549 ZNF326Q5BKZ1 582 aaKnown RBP29.18■■■□□ 2.26
CACNA1B-201ENST00000277549 TRIM52Q96A61 297 aa29.17■■■□□ 2.26
CACNA1B-201ENST00000277549 FAM50AQ14320 339 aaKnown RBP29.14■■■□□ 2.26
CACNA1B-201ENST00000277549 FBLN2P98095 1184 aa29.09■■■□□ 2.25
CACNA1B-201ENST00000277549 NEUROD1Q13562 356 aa29.03■■■□□ 2.24
CACNA1B-201ENST00000277549 RTL5Q5HYW3 569 aaPredicted RBP28.99■■■□□ 2.23
CACNA1B-201ENST00000277549 ZBTB47Q9UFB7 747 aaPredicted RBP28.98■■■□□ 2.23
CACNA1B-201ENST00000277549 LOC105371045A0A1W2PR82 267 aa28.93■■■□□ 2.22
CACNA1B-201ENST00000277549 ARID3CA6NKF2 412 aa28.92■■■□□ 2.22
CACNA1B-201ENST00000277549 TRIM26Q12899 539 aaPredicted RBP28.84■■■□□ 2.21
CACNA1B-201ENST00000277549 CANXP27824 592 aaKnown RBP28.79■■■□□ 2.2
CACNA1B-201ENST00000277549 HRCP23327 699 aa28.75■■■□□ 2.19
CACNA1B-201ENST00000277549 PLEKHG5O94827 1062 aa28.68■■■□□ 2.18
CACNA1B-201ENST00000277549 PABPN1Q86U42 306 aaKnown RBP eCLIP28.63■■■□□ 2.17
CACNA1B-201ENST00000277549 A0A0G2JS52 829 aa28.62■■■□□ 2.17
CACNA1B-201ENST00000277549 SENP3Q9H4L4 574 aaPredicted RBP28.56■■■□□ 2.16
CACNA1B-201ENST00000277549 SCAF1Q9H7N4 1312 aaKnown RBP28.53■■■□□ 2.16
CACNA1B-201ENST00000277549 NEFMP07197 916 aa28.48■■■□□ 2.15
CACNA1B-201ENST00000277549 ZNF777Q9ULD5 760 aaPredicted RBP28.43■■■□□ 2.14
CACNA1B-201ENST00000277549 ESF1Q9H501 851 aaKnown RBP28.42■■■□□ 2.14
CACNA1B-201ENST00000277549 P3H3Q8IVL6 736 aa28.41■■■□□ 2.14
CACNA1B-201ENST00000277549 CHGAP10645 457 aaKnown RBP28.41■■■□□ 2.14
CACNA1B-201ENST00000277549 DIEXFQ68CQ4 756 aaKnown RBP28.37■■■□□ 2.13
CACNA1B-201ENST00000277549 STAG3Q9UJ98 1225 aa28.35■■■□□ 2.13
CACNA1B-201ENST00000277549 NPM2Q86SE8 214 aaKnown RBP28.35■■■□□ 2.13
CACNA1B-201ENST00000277549 ZBTB7CA1YPR0 619 aa28.25■■■□□ 2.11
CACNA1B-201ENST00000277549 ANP32CO43423 234 aa28.24■■■□□ 2.11
CACNA1B-201ENST00000277549 CDK11AQ9UQ88 783 aaPredicted RBP28.16■■■□□ 2.1
CACNA1B-201ENST00000277549 SALL2Q9Y467 1007 aaPredicted RBP28.07■■■□□ 2.08
CACNA1B-201ENST00000277549 TULP1O00294 542 aaPredicted RBP28.03■■■□□ 2.08
CACNA1B-201ENST00000277549 HSP90AA1P07900 732 aaKnown RBP28.01■■■□□ 2.07
CACNA1B-201ENST00000277549 ARXQ96QS3 562 aa28■■■□□ 2.07
CACNA1B-201ENST00000277549 ABCC9O60706 1549 aa27.91■■■□□ 2.06
CACNA1B-201ENST00000277549 C14orf37Q86TY3 774 aa27.9■■■□□ 2.06
CACNA1B-201ENST00000277549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.87■■■□□ 2.05
CACNA1B-201ENST00000277549 GTF3C3Q9Y5Q9 886 aa27.86■■■□□ 2.05
CACNA1B-201ENST00000277549 EIF5BO60841 1220 aaKnown RBP27.8■■■□□ 2.04
CACNA1B-201ENST00000277549 ANP32AP39687 249 aaKnown RBP27.76■■■□□ 2.03
CACNA1B-201ENST00000277549 NPM1P06748 294 aaKnown RBP eCLIP27.72■■■□□ 2.03
CACNA1B-201ENST00000277549 ANP32BQ92688 251 aaKnown RBP27.72■■■□□ 2.03
CACNA1B-201ENST00000277549 CDK11BP21127 795 aaKnown RBP27.69■■■□□ 2.02
CACNA1B-201ENST00000277549 FAM9BQ8IZU0 186 aa27.64■■■□□ 2.02
CACNA1B-201ENST00000277549 TAOK2Q9UL54 1235 aa27.64■■■□□ 2.02
CACNA1B-201ENST00000277549 TPRNQ4KMQ1 711 aa27.64■■■□□ 2.02
CACNA1B-201ENST00000277549 HAP1P54257 671 aaPredicted RBP27.63■■■□□ 2.01
CACNA1B-201ENST00000277549 NCBP3Q53F19 620 aaKnown RBP27.62■■■□□ 2.01
CACNA1B-201ENST00000277549 KDM2AQ9Y2K7 1162 aa27.55■■■□□ 2
CACNA1B-201ENST00000277549 CHIC2Q9UKJ5 165 aa27.53■■■□□ 2
CACNA1B-201ENST00000277549 UPF2Q9HAU5 1272 aaKnown RBP27.48■■□□□ 1.99
CACNA1B-201ENST00000277549 SENP3-EIF4A1A0A087X0R7 540 aa27.46■■□□□ 1.99
CACNA1B-201ENST00000277549 NBR1Q14596 966 aa27.45■■□□□ 1.98
CACNA1B-201ENST00000277549 FKBP8Q14318 412 aa27.43■■□□□ 1.98
CACNA1B-201ENST00000277549 ARID4BQ4LE39 1312 aaPredicted RBP27.41■■□□□ 1.98
CACNA1B-201ENST00000277549 NPHP1O15259 732 aa27.38■■□□□ 1.97
CACNA1B-201ENST00000277549 PPP1R15AO75807 674 aaPredicted RBP27.36■■□□□ 1.97
CACNA1B-201ENST00000277549 HNRNPUQ00839 825 aaKnown RBP eCLIP27.36■■□□□ 1.97
CACNA1B-201ENST00000277549 WDR43Q15061 677 aaKnown RBP eCLIP27.33■■□□□ 1.97
CACNA1B-201ENST00000277549 LMOD2Q6P5Q4 547 aa27.33■■□□□ 1.97
CACNA1B-201ENST00000277549 IRX6P78412 446 aaPredicted RBP27.29■■□□□ 1.96
CACNA1B-201ENST00000277549 PPM1GO15355 546 aaPredicted RBP27.25■■□□□ 1.95
CACNA1B-201ENST00000277549 KCNH8Q96L42 1107 aa27.25■■□□□ 1.95
CACNA1B-201ENST00000277549 DDX10Q13206 875 aaKnown RBP27.25■■□□□ 1.95
CACNA1B-201ENST00000277549 MYH16Q9H6N6 1097 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms