Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.68■□□□□ 0.96e-6■■□□□ 12.1
NCBP2P52298 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.866e-6■■□□□ 12.1
NCBP2P52298 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.08■□□□□ 0.816e-6■■□□□ 12.1
NCBP2P52298 PLPP5-205ENST00000524616 831 ntTSL 319.66■□□□□ 0.746e-6■■□□□ 12.1
NCBP2P52298 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.676e-6■■□□□ 12.1
NCBP2P52298 PLPP5-204ENST00000524409 492 ntTSL 318.89■□□□□ 0.616e-6■■□□□ 12.1
NCBP2P52298 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.09■□□□□ 0.496e-6■■□□□ 12.1
NCBP2P52298 PREB-209ENST00000474802 1283 ntTSL 517.95■□□□□ 0.466e-6■■□□□ 12.1
NCBP2P52298 ZNF134-202ENST00000597975 559 ntTSL 1 (best)17.47■□□□□ 0.396e-6■■□□□ 12.1
NCBP2P52298 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.26■□□□□ 0.356e-6■■□□□ 12.1
NCBP2P52298 ZNF134-204ENST00000600883 590 ntTSL 417.26■□□□□ 0.356e-6■■□□□ 12.1
NCBP2P52298 PLPP5-215ENST00000534339 745 ntTSL 516.69■□□□□ 0.266e-6■■□□□ 12.1
NCBP2P52298 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.69■□□□□ 0.266e-6■■□□□ 12.1
NCBP2P52298 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.266e-6■■□□□ 12.1
NCBP2P52298 PREB-208ENST00000468045 3057 ntTSL 216.61■□□□□ 0.256e-6■■□□□ 12.1
NCBP2P52298 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.186e-6■■□□□ 12.1
NCBP2P52298 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.1■□□□□ 0.176e-6■■□□□ 12.1
NCBP2P52298 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.146e-6■■□□□ 12.1
NCBP2P52298 FARS2-204ENST00000602691 562 ntTSL 315.7■□□□□ 0.16e-6■■□□□ 12.1
NCBP2P52298 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.096e-6■■□□□ 12.1
NCBP2P52298 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.086e-6■■□□□ 12.1
NCBP2P52298 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.116e-6■■□□□ 12.1
NCBP2P52298 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.27□□□□□ -0.136e-6■■□□□ 12.1
NCBP2P52298 ABHD10-202ENST00000491580 1339 ntTSL 213.37□□□□□ -0.276e-6■■□□□ 12.1
NCBP2P52298 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.286e-6■■□□□ 12.1
NCBP2P52298 ABHD10-203ENST00000493784 890 ntTSL 313.22□□□□□ -0.296e-6■■□□□ 12.1
NCBP2P52298 ABHD10-205ENST00000497293 724 ntTSL 213.22□□□□□ -0.296e-6■■□□□ 12.1
NCBP2P52298 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.366e-6■■□□□ 12.1
NCBP2P52298 URM1-205ENST00000470840 723 ntTSL 212.68□□□□□ -0.386e-6■■□□□ 12.1
NCBP2P52298 PLPP5-212ENST00000531109 581 ntTSL 312.08□□□□□ -0.486e-6■■□□□ 12.1
NCBP2P52298 SMIM12-203ENST00000426886 2618 ntTSL 1 (best)11.64□□□□□ -0.556e-6■■□□□ 12.1
NCBP2P52298 URM1-203ENST00000372853 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.696e-6■■□□□ 12.1
NCBP2P52298 MIB1-204ENST00000578646 3306 ntTSL 210.51□□□□□ -0.736e-6■■□□□ 12.1
NCBP2P52298 URM1-201ENST00000372847 753 ntTSL 3 BASIC9.74□□□□□ -0.856e-6■■□□□ 12.1
NCBP2P52298 URM1-204ENST00000452446 2944 ntTSL 2 BASIC9.16□□□□□ -0.946e-6■■□□□ 12.1
NCBP2P52298 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC8.27□□□□□ -1.096e-6■■□□□ 12.1
NCBP2P52298 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.166e-6■■□□□ 12.1
NCBP2P52298 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.226e-6■■□□□ 12.1
NCBP2P52298 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.02□□□□□ -1.296e-6■■□□□ 12.1
NCBP2P52298 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.36e-6■■□□□ 12.1
NCBP2P52298 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.366e-6■■□□□ 12.1
NCBP2P52298 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.48□□□□□ -1.376e-6■■□□□ 12.1
NCBP2P52298 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.456e-6■■□□□ 12.1
NCBP2P52298 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.596e-6■■□□□ 12.1
NCBP2P52298 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.596e-6■■□□□ 12.1
NCBP2P52298 TJP1-206ENST00000473741 270 ntTSL 20.73□□□□□ -2.296e-6■■□□□ 12.1
NCBP2P52298 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.37□□□□□ -0.273e-13■■□□□ 12.1
NCBP2P52298 SF3B1-211ENST00000487698 2127 ntTSL 1 (best) BASIC8.91□□□□□ -0.983e-13■■□□□ 12.1
NCBP2P52298 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.353e-13■■□□□ 12.1
NCBP2P52298 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.96□□□□□ -1.783e-13■■□□□ 12.1
NCBP2P52298 SF3B1-203ENST00000414174 593 ntTSL 42.72□□□□□ -1.973e-13■■□□□ 12.1
NCBP2P52298 RAB1A-205ENST00000494188 771 ntTSL 221.26■□□□□ 0.997e-18■■□□□ 12.1
NCBP2P52298 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.91■□□□□ 0.787e-18■■□□□ 12.1
NCBP2P52298 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.68■□□□□ 0.17e-18■■□□□ 12.1
NCBP2P52298 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.277e-18■■□□□ 12.1
NCBP2P52298 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.82□□□□□ -0.367e-18■■□□□ 12.1
NCBP2P52298 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.025e-7■■□□□ 12
NCBP2P52298 SYNCRIP-203ENST00000444272 610 ntTSL 311.88□□□□□ -0.515e-7■■□□□ 12
NCBP2P52298 CTDSP1-207ENST00000473420 922 ntTSL 317.67■□□□□ 0.421e-6■■□□□ 12
NCBP2P52298 CTDSP1-215ENST00000498160 877 ntTSL 516.44■□□□□ 0.221e-6■■□□□ 12
NCBP2P52298 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.78□□□□□ -0.041e-6■■□□□ 12
NCBP2P52298 CTDSP1-214ENST00000497677 998 ntTSL 214.64□□□□□ -0.071e-6■■□□□ 12
NCBP2P52298 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.151e-6■■□□□ 12
NCBP2P52298 CTDSP1-205ENST00000452977 818 ntTSL 514.07□□□□□ -0.161e-6■■□□□ 12
NCBP2P52298 CTDSP1-212ENST00000494067 362 ntTSL 312.17□□□□□ -0.461e-6■■□□□ 12
NCBP2P52298 CTDSP1-210ENST00000491064 786 ntTSL 312.08□□□□□ -0.481e-6■■□□□ 12
NCBP2P52298 HFM1-204ENST00000448819 540 ntTSL 58.38□□□□□ -1.074e-8■■□□□ 12
NCBP2P52298 HFM1-208ENST00000488023 1699 ntTSL 52.69□□□□□ -1.984e-8■■□□□ 12
NCBP2P52298 HFM1-202ENST00000427444 672 ntTSL 52.3□□□□□ -2.044e-8■■□□□ 12
NCBP2P52298 HFM1-207ENST00000481900 2020 ntTSL 52.25□□□□□ -2.054e-8■■□□□ 12
NCBP2P52298 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.224e-8■■□□□ 12
NCBP2P52298 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.113e-9■■□□□ 12
NCBP2P52298 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.143e-9■■□□□ 12
NCBP2P52298 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.152e-15■■□□□ 12
NCBP2P52298 NEAT1-202ENST00000501122 22743 ntBASIC4.37□□□□□ -1.712e-27■■□□□ 12
NCBP2P52298 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.42e-13■■□□□ 12
NCBP2P52298 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.47■■□□□ 1.192e-13■■□□□ 12
NCBP2P52298 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.53■□□□□ 0.882e-13■■□□□ 12
NCBP2P52298 WTAP-204ENST00000494513 635 ntTSL 53.39□□□□□ -1.872e-13■■□□□ 12
NCBP2P52298 NDUFS1-203ENST00000432169 2080 ntTSL 2 BASIC9.06□□□□□ -0.961e-8■■□□□ 12
NCBP2P52298 NDUFS1-202ENST00000423725 2631 ntTSL 2 BASIC9.03□□□□□ -0.961e-8■■□□□ 12
NCBP2P52298 NDUFS1-209ENST00000457011 2171 ntTSL 2 BASIC8.95□□□□□ -0.981e-8■■□□□ 12
NCBP2P52298 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.38□□□□□ -1.231e-8■■□□□ 12
NCBP2P52298 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.341e-8■■□□□ 12
NCBP2P52298 NDUFS1-208ENST00000456284 563 ntTSL 46.32□□□□□ -1.41e-8■■□□□ 12
NCBP2P52298 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.04■■□□□ 1.281e-13■■□□□ 12
NCBP2P52298 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.47■□□□□ 0.551e-13■■□□□ 12
NCBP2P52298 HSD17B12-212ENST00000636722 540 ntTSL 418.47■□□□□ 0.551e-13■■□□□ 12
NCBP2P52298 HSD17B12-211ENST00000636007 563 ntTSL 416.83■□□□□ 0.281e-13■■□□□ 12
NCBP2P52298 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.11e-13■■□□□ 12
NCBP2P52298 HSD17B12-206ENST00000531185 611 ntTSL 415.38■□□□□ 0.051e-13■■□□□ 12
NCBP2P52298 HSD17B12-205ENST00000527433 559 ntTSL 412.78□□□□□ -0.361e-13■■□□□ 12
NCBP2P52298 SLC16A3-216ENST00000583025 955 ntTSL 217.75■□□□□ 0.433e-8■■□□□ 12
NCBP2P52298 ARF3-205ENST00000536283 537 ntTSL 420.21■□□□□ 0.839e-10■■□□□ 12
NCBP2P52298 ARF3-206ENST00000539611 576 ntTSL 519.67■□□□□ 0.749e-10■■□□□ 12
NCBP2P52298 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.77■□□□□ 0.69e-10■■□□□ 12
NCBP2P52298 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.59e-10■■□□□ 12
NCBP2P52298 ARF3-204ENST00000485410 563 ntTSL 317.67■□□□□ 0.429e-10■■□□□ 12
NCBP2P52298 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.429e-10■■□□□ 12
NCBP2P52298 TMX2-CTNND1-201ENST00000528395 585 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.752e-9■■□□□ 12
Retrieved 100 of 18,329 protein–RNA pairs in 122.6 ms