RNA–Protein interactions for RNA: ENST00000409892.5

RAB1A-204, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB1A, Length 2,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-204ENST00000409892 PELP1Q8IZL8 1130 aaKnown RBP32.31■■■□□ 2.76
RAB1A-204ENST00000409892 MYT1Q01538 1121 aa31.68■■■□□ 2.66
RAB1A-204ENST00000409892 HRCP23327 699 aa30.79■■■□□ 2.52
RAB1A-204ENST00000409892 TTBK1Q5TCY1 1321 aaPredicted RBP30.32■■■□□ 2.44
RAB1A-204ENST00000409892 SCAF1Q9H7N4 1312 aaKnown RBP29.81■■■□□ 2.36
RAB1A-204ENST00000409892 PPARGC1BQ86YN6 1023 aaKnown RBP29.65■■■□□ 2.34
RAB1A-204ENST00000409892 NISCHQ9Y2I1 1504 aa29.59■■■□□ 2.33
RAB1A-204ENST00000409892 PCGF6Q9BYE7 350 aa29.07■■■□□ 2.24
RAB1A-204ENST00000409892 PRKCSHP14314 528 aaPredicted RBP29.03■■■□□ 2.24
RAB1A-204ENST00000409892 BCL11AQ9H165 835 aa28.92■■■□□ 2.22
RAB1A-204ENST00000409892 ACIN1Q9UKV3 1341 aaKnown RBP28.74■■■□□ 2.19
RAB1A-204ENST00000409892 ERICH6Q7L0X2 663 aa28.64■■■□□ 2.18
RAB1A-204ENST00000409892 MYO15BQ96JP2 1530 aa28.62■■■□□ 2.17
RAB1A-204ENST00000409892 CENPBP07199 599 aaPredicted RBP28.62■■■□□ 2.17
RAB1A-204ENST00000409892 FAM9AQ8IZU1 332 aaPredicted RBP28.57■■■□□ 2.16
RAB1A-204ENST00000409892 ZEB1P37275 1124 aaPredicted RBP28.56■■■□□ 2.16
RAB1A-204ENST00000409892 APLP2Q06481 763 aa28.44■■■□□ 2.14
RAB1A-204ENST00000409892 NEUROD1Q13562 356 aa28.41■■■□□ 2.14
RAB1A-204ENST00000409892 GTF3C3Q9Y5Q9 886 aa28.41■■■□□ 2.14
RAB1A-204ENST00000409892 DCAF1Q9Y4B6 1507 aa28.4■■■□□ 2.14
RAB1A-204ENST00000409892 CCDC180Q9P1Z9 1646 aa28.37■■■□□ 2.13
RAB1A-204ENST00000409892 TRIM26Q12899 539 aaPredicted RBP28.06■■■□□ 2.08
RAB1A-204ENST00000409892 ANP32EQ9BTT0 268 aa28.01■■■□□ 2.07
RAB1A-204ENST00000409892 CHIC1Q5VXU3 224 aa27.64■■■□□ 2.01
RAB1A-204ENST00000409892 CSRNP3Q8WYN3 585 aa27.57■■■□□ 2
RAB1A-204ENST00000409892 DIEXFQ68CQ4 756 aaKnown RBP27.32■■□□□ 1.96
RAB1A-204ENST00000409892 SUPT5HO00267 1087 aaKnown RBP27.23■■□□□ 1.95
RAB1A-204ENST00000409892 SLC24A1O60721 1099 aa27.19■■□□□ 1.94
RAB1A-204ENST00000409892 CLSPNQ9HAW4 1339 aa27.17■■□□□ 1.94
RAB1A-204ENST00000409892 TSHZ2Q9NRE2 1034 aa27.1■■□□□ 1.93
RAB1A-204ENST00000409892 LOC105371045A0A1W2PR82 267 aa26.87■■□□□ 1.89
RAB1A-204ENST00000409892 TRIM41Q8WV44 630 aa26.87■■□□□ 1.89
RAB1A-204ENST00000409892 UBE2Q2Q8WVN8 375 aa26.84■■□□□ 1.89
RAB1A-204ENST00000409892 ANO8Q9HCE9 1232 aaPredicted RBP26.8■■□□□ 1.88
RAB1A-204ENST00000409892 SUPT16HQ9Y5B9 1047 aaKnown RBP26.79■■□□□ 1.88
RAB1A-204ENST00000409892 YTHDC1Q96MU7 727 aaKnown RBP26.74■■□□□ 1.87
RAB1A-204ENST00000409892 SHROOM4Q9ULL8 1493 aa26.7■■□□□ 1.87
RAB1A-204ENST00000409892 EIF5BO60841 1220 aaKnown RBP26.65■■□□□ 1.86
RAB1A-204ENST00000409892 MYT1LQ9UL68 1186 aa26.65■■□□□ 1.86
RAB1A-204ENST00000409892 DAXXQ9UER7 740 aaPredicted RBP26.63■■□□□ 1.85
RAB1A-204ENST00000409892 ERICH6BQ5W0A0 696 aa26.54■■□□□ 1.84
RAB1A-204ENST00000409892 ZNF316A6NFI3 1004 aaPredicted RBP26.53■■□□□ 1.84
RAB1A-204ENST00000409892 CCER1Q8TC90 406 aaPredicted RBP26.5■■□□□ 1.83
RAB1A-204ENST00000409892 MIER1Q8N108 512 aa26.4■■□□□ 1.82
RAB1A-204ENST00000409892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.38■■□□□ 1.81
RAB1A-204ENST00000409892 SALL2Q9Y467 1007 aaPredicted RBP26.34■■□□□ 1.81
RAB1A-204ENST00000409892 RBM19Q9Y4C8 960 aaKnown RBP26.28■■□□□ 1.8
RAB1A-204ENST00000409892 DEKP35659 375 aaKnown RBP26.21■■□□□ 1.79
RAB1A-204ENST00000409892 MSH5O43196 834 aa26.18■■□□□ 1.78
RAB1A-204ENST00000409892 PKNOX2Q96KN3 472 aa26.11■■□□□ 1.77
RAB1A-204ENST00000409892 FANCIQ9NVI1 1328 aa26.08■■□□□ 1.77
RAB1A-204ENST00000409892 CCDC136Q96JN2 1154 aa26.08■■□□□ 1.77
RAB1A-204ENST00000409892 PLEKHG5O94827 1062 aa25.88■■□□□ 1.73
RAB1A-204ENST00000409892 ABCC9O60706 1549 aa25.85■■□□□ 1.73
RAB1A-204ENST00000409892 PODXL2Q9NZ53 605 aa25.83■■□□□ 1.72
RAB1A-204ENST00000409892 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.73■■□□□ 1.71
RAB1A-204ENST00000409892 BCANQ96GW7 911 aa25.67■■□□□ 1.7
RAB1A-204ENST00000409892 FKBP8Q14318 412 aa25.63■■□□□ 1.69
RAB1A-204ENST00000409892 IL27Q8NEV9 243 aa25.57■■□□□ 1.68
RAB1A-204ENST00000409892 NEFLP07196 543 aa25.48■■□□□ 1.67
RAB1A-204ENST00000409892 ZCCHC6Q5VYS8 1495 aaKnown RBP25.38■■□□□ 1.65
RAB1A-204ENST00000409892 RTN4Q9NQC3 1192 aaKnown RBP25.38■■□□□ 1.65
RAB1A-204ENST00000409892 GLIPR1L2Q4G1C9 344 aa25.37■■□□□ 1.65
RAB1A-204ENST00000409892 DNAJC5BQ9UF47 199 aa25.35■■□□□ 1.65
RAB1A-204ENST00000409892 CDK11AQ9UQ88 783 aaPredicted RBP25.35■■□□□ 1.65
RAB1A-204ENST00000409892 NOP58Q9Y2X3 529 aaKnown RBP25.31■■□□□ 1.64
RAB1A-204ENST00000409892 C11orf95C9JLR9 678 aaPredicted RBP25.3■■□□□ 1.64
RAB1A-204ENST00000409892 ITGAEP38570 1179 aa25.3■■□□□ 1.64
RAB1A-204ENST00000409892 RTL5Q5HYW3 569 aaPredicted RBP25.26■■□□□ 1.63
RAB1A-204ENST00000409892 NBR1Q14596 966 aa25.26■■□□□ 1.63
RAB1A-204ENST00000409892 WRNQ14191 1432 aaPredicted RBP eCLIP25.22■■□□□ 1.63
RAB1A-204ENST00000409892 RSPH6AQ9H0K4 717 aa25.19■■□□□ 1.62
RAB1A-204ENST00000409892 ZMYND15Q9H091 742 aa25.18■■□□□ 1.62
RAB1A-204ENST00000409892 WASHC2AQ641Q2 1341 aa25.1■■□□□ 1.61
RAB1A-204ENST00000409892 WASHC2CQ9Y4E1 1318 aa25.07■■□□□ 1.6
RAB1A-204ENST00000409892 PAK3O75914 559 aaPredicted RBP25.02■■□□□ 1.6
RAB1A-204ENST00000409892 VSIG10Q8N0Z9 540 aa25■■□□□ 1.59
RAB1A-204ENST00000409892 KCNH8Q96L42 1107 aa24.92■■□□□ 1.58
RAB1A-204ENST00000409892 USP35Q9P2H5 1018 aa24.92■■□□□ 1.58
RAB1A-204ENST00000409892 TIMELESSQ9UNS1 1208 aa24.9■■□□□ 1.58
RAB1A-204ENST00000409892 FGD1P98174 961 aa24.87■■□□□ 1.57
RAB1A-204ENST00000409892 PDE4CQ08493 712 aa24.86■■□□□ 1.57
RAB1A-204ENST00000409892 IPO9Q96P70 1041 aaKnown RBP24.82■■□□□ 1.56
RAB1A-204ENST00000409892 AAMPQ13685 434 aa24.8■■□□□ 1.56
RAB1A-204ENST00000409892 EHMT2Q96KQ7 1210 aa24.76■■□□□ 1.55
RAB1A-204ENST00000409892 BRPF3Q9ULD4 1205 aa24.76■■□□□ 1.55
RAB1A-204ENST00000409892 FAM43AQ8N2R8 423 aa24.75■■□□□ 1.55
RAB1A-204ENST00000409892 ZBTB47Q9UFB7 747 aaPredicted RBP24.74■■□□□ 1.55
RAB1A-204ENST00000409892 ANP32AP39687 249 aaKnown RBP24.73■■□□□ 1.55
RAB1A-204ENST00000409892 RBM10P98175 930 aaKnown RBP24.73■■□□□ 1.55
RAB1A-204ENST00000409892 PPP4R2Q9NY27 417 aa24.73■■□□□ 1.55
RAB1A-204ENST00000409892 PDIA4P13667 645 aaKnown RBP24.72■■□□□ 1.55
RAB1A-204ENST00000409892 A0A0U1RQG5 324 aaPredicted RBP24.66■■□□□ 1.54
RAB1A-204ENST00000409892 CCER2I3L3R5 266 aa24.66■■□□□ 1.54
RAB1A-204ENST00000409892 NEFMP07197 916 aa24.66■■□□□ 1.54
RAB1A-204ENST00000409892 DCAF8L2P0C7V8 631 aa24.66■■□□□ 1.54
RAB1A-204ENST00000409892 RRP9O43818 475 aaKnown RBP24.63■■□□□ 1.53
RAB1A-204ENST00000409892 EEA1Q15075 1411 aa24.55■■□□□ 1.52
RAB1A-204ENST00000409892 TRIM52Q96A61 297 aa24.55■■□□□ 1.52
RAB1A-204ENST00000409892 CEP162Q5TB80 1403 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms