RNA–Protein interactions for RNA: ENST00000372847.1

URM1-201, Transcript of ubiquitin related modifier 1, humanhuman

TSL 3 BASIC

Gene URM1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URM1-201ENST00000372847 NISCHQ9Y2I1 1504 aa26.09■■□□□ 1.77
URM1-201ENST00000372847 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
URM1-201ENST00000372847 ABCC9O60706 1549 aa23.11■■□□□ 1.29
URM1-201ENST00000372847 DCAF8L2P0C7V8 631 aa22.05■■□□□ 1.12
URM1-201ENST00000372847 RB1CC1Q8TDY2 1594 aa22.04■■□□□ 1.12
URM1-201ENST00000372847 NACADO15069 1562 aa21.92■■□□□ 1.1
URM1-201ENST00000372847 ZCCHC6Q5VYS8 1495 aaKnown RBP21.68■■□□□ 1.06
URM1-201ENST00000372847 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
URM1-201ENST00000372847 MYO15BQ96JP2 1530 aa21.62■■□□□ 1.05
URM1-201ENST00000372847 PABPN1Q86U42 306 aaKnown RBP eCLIP21.57■■□□□ 1.04
URM1-201ENST00000372847 DCAF1Q9Y4B6 1507 aa21.49■■□□□ 1.03
URM1-201ENST00000372847 BICRAQ9NZM4 1560 aa21.4■■□□□ 1.02
URM1-201ENST00000372847 DNAJC5BQ9UF47 199 aa21.37■■□□□ 1.01
URM1-201ENST00000372847 SCRIBQ14160 1630 aa21.36■■□□□ 1.01
URM1-201ENST00000372847 SHROOM4Q9ULL8 1493 aa21.01■□□□□ 0.95
URM1-201ENST00000372847 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
URM1-201ENST00000372847 CC2D2AQ9P2K1 1620 aa20.86■□□□□ 0.93
URM1-201ENST00000372847 CECR2Q9BXF3 1484 aa20.73■□□□□ 0.91
URM1-201ENST00000372847 SMARCA4P51532 1647 aa20.33■□□□□ 0.84
URM1-201ENST00000372847 BAZ1AQ9NRL2 1556 aaPredicted RBP20.24■□□□□ 0.83
URM1-201ENST00000372847 ATAD2BQ9ULI0 1458 aa20.24■□□□□ 0.83
URM1-201ENST00000372847 NCAPD3P42695 1498 aa20.21■□□□□ 0.83
URM1-201ENST00000372847 SMARCA2P51531 1590 aa20.19■□□□□ 0.82
URM1-201ENST00000372847 MROH2BQ7Z745 1585 aa20.16■□□□□ 0.82
URM1-201ENST00000372847 HMGXB3Q12766 1538 aa20.12■□□□□ 0.81
URM1-201ENST00000372847 BAZ1BQ9UIG0 1483 aaKnown RBP20.1■□□□□ 0.81
URM1-201ENST00000372847 PEG3Q9GZU2 1588 aa20.04■□□□□ 0.8
URM1-201ENST00000372847 WIZO95785 1651 aa19.98■□□□□ 0.79
URM1-201ENST00000372847 NESP48681 1621 aa19.93■□□□□ 0.78
URM1-201ENST00000372847 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
URM1-201ENST00000372847 RSF1Q96T23 1441 aaPredicted RBP19.8■□□□□ 0.76
URM1-201ENST00000372847 LAMC3Q9Y6N6 1575 aa19.76■□□□□ 0.75
URM1-201ENST00000372847 KIF21AQ7Z4S6 1674 aa19.71■□□□□ 0.75
URM1-201ENST00000372847 CUX2O14529 1486 aa19.68■□□□□ 0.74
URM1-201ENST00000372847 TOP2AP11388 1531 aaKnown RBP19.67■□□□□ 0.74
URM1-201ENST00000372847 CADPSQ9ULU8 1353 aa19.64■□□□□ 0.73
URM1-201ENST00000372847 THOC2Q8NI27 1593 aaKnown RBP19.63■□□□□ 0.73
URM1-201ENST00000372847 PDS5BQ9NTI5 1447 aa19.61■□□□□ 0.73
URM1-201ENST00000372847 FANCD2Q9BXW9 1451 aa19.47■□□□□ 0.71
URM1-201ENST00000372847 MRC2Q9UBG0 1479 aa19.47■□□□□ 0.71
URM1-201ENST00000372847 CEP164Q9UPV0 1460 aa19.47■□□□□ 0.71
URM1-201ENST00000372847 CCDC88BA6NC98 1476 aa19.46■□□□□ 0.71
URM1-201ENST00000372847 CFTRP13569 1480 aa19.46■□□□□ 0.71
URM1-201ENST00000372847 PRDM2Q13029 1718 aa19.41■□□□□ 0.7
URM1-201ENST00000372847 WDR62O43379 1518 aa19.39■□□□□ 0.69
URM1-201ENST00000372847 DNAJC5Q9H3Z4 198 aa19.35■□□□□ 0.69
URM1-201ENST00000372847 URB2Q14146 1524 aaKnown RBP19.29■□□□□ 0.68
URM1-201ENST00000372847 SUPT5HO00267 1087 aaKnown RBP19.28■□□□□ 0.68
URM1-201ENST00000372847 TOPBP1Q92547 1522 aa19.13■□□□□ 0.65
URM1-201ENST00000372847 DNMBPQ6XZF7 1577 aa19.08■□□□□ 0.65
URM1-201ENST00000372847 ABCC8Q09428 1581 aa19.04■□□□□ 0.64
URM1-201ENST00000372847 ZNF608Q9ULD9 1512 aaPredicted RBP19.03■□□□□ 0.64
URM1-201ENST00000372847 IFT140Q96RY7 1462 aa19.03■□□□□ 0.64
URM1-201ENST00000372847 EIF4G3O43432 1585 aaKnown RBP18.95■□□□□ 0.62
URM1-201ENST00000372847 POLA1P09884 1462 aaPredicted RBP18.94■□□□□ 0.62
URM1-201ENST00000372847 TARBP1Q13395 1621 aaKnown RBP18.93■□□□□ 0.62
URM1-201ENST00000372847 RAD54L2Q9Y4B4 1467 aa18.92■□□□□ 0.62
URM1-201ENST00000372847 CUX1P39880 1505 aa18.92■□□□□ 0.62
URM1-201ENST00000372847 FGD5Q6ZNL6 1462 aa18.9■□□□□ 0.62
URM1-201ENST00000372847 AQRO60306 1485 aaKnown RBP eCLIP18.89■□□□□ 0.61
URM1-201ENST00000372847 SOGA1O94964 1423 aa18.87■□□□□ 0.61
URM1-201ENST00000372847 OSCARQ8IYS5 282 aa18.86■□□□□ 0.61
URM1-201ENST00000372847 TDRD9Q8NDG6 1382 aaKnown RBP18.82■□□□□ 0.6
URM1-201ENST00000372847 CHD1O14646 1710 aa18.81■□□□□ 0.6
URM1-201ENST00000372847 TRIM41Q8WV44 630 aa18.79■□□□□ 0.6
URM1-201ENST00000372847 FBLN2P98095 1184 aa18.77■□□□□ 0.6
URM1-201ENST00000372847 WDR97A6NE52 1622 aa18.75■□□□□ 0.59
URM1-201ENST00000372847 SNAPC4Q5SXM2 1469 aa18.71■□□□□ 0.59
URM1-201ENST00000372847 SYNJ1O43426 1573 aa18.71■□□□□ 0.59
URM1-201ENST00000372847 WRNQ14191 1432 aaPredicted RBP eCLIP18.7■□□□□ 0.58
URM1-201ENST00000372847 PBRM1Q86U86 1689 aa18.69■□□□□ 0.58
URM1-201ENST00000372847 BIVM-ERCC5R4GMW8 1640 aa18.69■□□□□ 0.58
URM1-201ENST00000372847 TOP2BQ02880 1626 aa18.67■□□□□ 0.58
URM1-201ENST00000372847 RIMBP3CA6NJZ7 1639 aa18.66■□□□□ 0.58
URM1-201ENST00000372847 RIMBP3BA6NNM3 1639 aa18.66■□□□□ 0.58
URM1-201ENST00000372847 RIMBP3Q9UFD9 1639 aa18.66■□□□□ 0.58
URM1-201ENST00000372847 GRIN2BQ13224 1484 aa18.65■□□□□ 0.58
URM1-201ENST00000372847 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
URM1-201ENST00000372847 ABCA10Q8WWZ4 1543 aa18.64■□□□□ 0.57
URM1-201ENST00000372847 ABCA5Q8WWZ7 1642 aa18.63■□□□□ 0.57
URM1-201ENST00000372847 CHMP7Q8WUX9 453 aaPredicted RBP18.61■□□□□ 0.57
URM1-201ENST00000372847 MAGI1Q96QZ7 1491 aaPredicted RBP18.6■□□□□ 0.57
URM1-201ENST00000372847 ARHGEF11O15085 1522 aa18.59■□□□□ 0.57
URM1-201ENST00000372847 SYNJ2O15056 1496 aa18.55■□□□□ 0.56
URM1-201ENST00000372847 CLASP1Q7Z460 1538 aa18.49■□□□□ 0.55
URM1-201ENST00000372847 ADAMTS12P58397 1594 aa18.48■□□□□ 0.55
URM1-201ENST00000372847 CYB5RLQ6IPT4 315 aa18.47■□□□□ 0.55
URM1-201ENST00000372847 GRIN2AQ12879 1464 aa18.43■□□□□ 0.54
URM1-201ENST00000372847 ARAP1Q96P48 1450 aa18.43■□□□□ 0.54
URM1-201ENST00000372847 ERICH3Q5RHP9 1530 aa18.4■□□□□ 0.54
URM1-201ENST00000372847 FHAD1B1AJZ9 1412 aa18.4■□□□□ 0.54
URM1-201ENST00000372847 CEP170Q5SW79 1584 aa18.38■□□□□ 0.53
URM1-201ENST00000372847 NUP160Q12769 1436 aa18.31■□□□□ 0.52
URM1-201ENST00000372847 KIF27Q86VH2 1401 aa18.31■□□□□ 0.52
URM1-201ENST00000372847 ERCC6L2Q5T890 1561 aa18.3■□□□□ 0.52
URM1-201ENST00000372847 IGF1RP08069 1367 aa18.24■□□□□ 0.51
URM1-201ENST00000372847 CUL7Q14999 1698 aa18.24■□□□□ 0.51
URM1-201ENST00000372847 SHROOM2Q13796 1616 aa18.23■□□□□ 0.51
URM1-201ENST00000372847 TRHP20396 242 aaPredicted RBP18.22■□□□□ 0.51
URM1-201ENST00000372847 RUSC2Q8N2Y8 1516 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms