RNA–Protein interactions for RNA: ENST00000485410.5

ARF3-204, Transcript of ADP ribosylation factor 3, humanhuman

TSL 3

Gene ARF3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-204ENST00000485410 NISCHQ9Y2I1 1504 aa47.53■■■■■ 5.2
ARF3-204ENST00000485410 CCDC180Q9P1Z9 1646 aa42.43■■■■■ 4.38
ARF3-204ENST00000485410 ABCC9O60706 1549 aa41.9■■■■■ 4.3
ARF3-204ENST00000485410 RB1CC1Q8TDY2 1594 aa40.13■■■■■ 4.01
ARF3-204ENST00000485410 NACADO15069 1562 aa39.98■■■■□ 3.99
ARF3-204ENST00000485410 DCAF8L2P0C7V8 631 aa39.94■■■■□ 3.98
ARF3-204ENST00000485410 MYO15BQ96JP2 1530 aa39.6■■■■□ 3.93
ARF3-204ENST00000485410 ZCCHC6Q5VYS8 1495 aaKnown RBP39.49■■■■□ 3.91
ARF3-204ENST00000485410 UNC13AQ9UPW8 1703 aa39.29■■■■□ 3.88
ARF3-204ENST00000485410 DCAF1Q9Y4B6 1507 aa39.29■■■■□ 3.88
ARF3-204ENST00000485410 PABPN1Q86U42 306 aaKnown RBP eCLIP39.11■■■■□ 3.85
ARF3-204ENST00000485410 BICRAQ9NZM4 1560 aa38.94■■■■□ 3.82
ARF3-204ENST00000485410 DNAJC5BQ9UF47 199 aa38.85■■■■□ 3.81
ARF3-204ENST00000485410 SCRIBQ14160 1630 aa38.69■■■■□ 3.78
ARF3-204ENST00000485410 SHROOM4Q9ULL8 1493 aa38.43■■■■□ 3.74
ARF3-204ENST00000485410 EIF4G1Q04637 1599 aaKnown RBP37.93■■■■□ 3.66
ARF3-204ENST00000485410 CC2D2AQ9P2K1 1620 aa37.9■■■■□ 3.66
ARF3-204ENST00000485410 CECR2Q9BXF3 1484 aa37.69■■■■□ 3.62
ARF3-204ENST00000485410 SMARCA4P51532 1647 aa36.97■■■■□ 3.51
ARF3-204ENST00000485410 NCAPD3P42695 1498 aa36.9■■■■□ 3.5
ARF3-204ENST00000485410 ATAD2BQ9ULI0 1458 aa36.86■■■■□ 3.49
ARF3-204ENST00000485410 BAZ1AQ9NRL2 1556 aaPredicted RBP36.86■■■■□ 3.49
ARF3-204ENST00000485410 SMARCA2P51531 1590 aa36.79■■■■□ 3.48
ARF3-204ENST00000485410 HMGXB3Q12766 1538 aa36.66■■■■□ 3.46
ARF3-204ENST00000485410 MROH2BQ7Z745 1585 aa36.63■■■■□ 3.45
ARF3-204ENST00000485410 PEG3Q9GZU2 1588 aa36.6■■■■□ 3.45
ARF3-204ENST00000485410 BAZ1BQ9UIG0 1483 aaKnown RBP36.53■■■■□ 3.44
ARF3-204ENST00000485410 WIZO95785 1651 aa36.25■■■■□ 3.39
ARF3-204ENST00000485410 NESP48681 1621 aa36.16■■■■□ 3.38
ARF3-204ENST00000485410 ERCC6Q03468 1493 aa36.13■■■■□ 3.37
ARF3-204ENST00000485410 RSF1Q96T23 1441 aaPredicted RBP36.07■■■■□ 3.36
ARF3-204ENST00000485410 LAMC3Q9Y6N6 1575 aa35.99■■■■□ 3.35
ARF3-204ENST00000485410 CUX2O14529 1486 aa35.87■■■■□ 3.33
ARF3-204ENST00000485410 CADPSQ9ULU8 1353 aa35.81■■■■□ 3.32
ARF3-204ENST00000485410 TOP2AP11388 1531 aaKnown RBP35.79■■■■□ 3.32
ARF3-204ENST00000485410 PDS5BQ9NTI5 1447 aa35.75■■■■□ 3.31
ARF3-204ENST00000485410 KIF21AQ7Z4S6 1674 aa35.74■■■■□ 3.31
ARF3-204ENST00000485410 THOC2Q8NI27 1593 aaKnown RBP35.67■■■■□ 3.3
ARF3-204ENST00000485410 CFTRP13569 1480 aa35.5■■■■□ 3.27
ARF3-204ENST00000485410 MRC2Q9UBG0 1479 aa35.41■■■■□ 3.26
ARF3-204ENST00000485410 CCDC88BA6NC98 1476 aa35.4■■■■□ 3.26
ARF3-204ENST00000485410 FANCD2Q9BXW9 1451 aa35.39■■■■□ 3.26
ARF3-204ENST00000485410 CEP164Q9UPV0 1460 aa35.37■■■■□ 3.25
ARF3-204ENST00000485410 WDR62O43379 1518 aa35.3■■■■□ 3.24
ARF3-204ENST00000485410 DNAJC5Q9H3Z4 198 aa35.28■■■■□ 3.24
ARF3-204ENST00000485410 PRDM2Q13029 1718 aa35.26■■■■□ 3.24
ARF3-204ENST00000485410 URB2Q14146 1524 aaKnown RBP35.06■■■■□ 3.2
ARF3-204ENST00000485410 SUPT5HO00267 1087 aaKnown RBP34.91■■■■□ 3.18
ARF3-204ENST00000485410 TOPBP1Q92547 1522 aa34.79■■■■□ 3.16
ARF3-204ENST00000485410 ABCC8Q09428 1581 aa34.76■■■■□ 3.16
ARF3-204ENST00000485410 DNMBPQ6XZF7 1577 aa34.71■■■■□ 3.15
ARF3-204ENST00000485410 IFT140Q96RY7 1462 aa34.65■■■■□ 3.14
ARF3-204ENST00000485410 ZNF608Q9ULD9 1512 aaPredicted RBP34.55■■■■□ 3.12
ARF3-204ENST00000485410 POLA1P09884 1462 aaPredicted RBP34.46■■■■□ 3.11
ARF3-204ENST00000485410 TARBP1Q13395 1621 aaKnown RBP34.45■■■■□ 3.11
ARF3-204ENST00000485410 EIF4G3O43432 1585 aaKnown RBP34.39■■■■□ 3.1
ARF3-204ENST00000485410 CUX1P39880 1505 aa34.38■■■■□ 3.09
ARF3-204ENST00000485410 OSCARQ8IYS5 282 aa34.37■■■■□ 3.09
ARF3-204ENST00000485410 RAD54L2Q9Y4B4 1467 aa34.33■■■■□ 3.09
ARF3-204ENST00000485410 SOGA1O94964 1423 aa34.33■■■■□ 3.09
ARF3-204ENST00000485410 FGD5Q6ZNL6 1462 aa34.33■■■■□ 3.09
ARF3-204ENST00000485410 AQRO60306 1485 aaKnown RBP eCLIP34.32■■■■□ 3.08
ARF3-204ENST00000485410 TDRD9Q8NDG6 1382 aaKnown RBP34.19■■■■□ 3.06
ARF3-204ENST00000485410 WDR97A6NE52 1622 aa34.12■■■■□ 3.05
ARF3-204ENST00000485410 CHD1O14646 1710 aa34.07■■■■□ 3.05
ARF3-204ENST00000485410 WRNQ14191 1432 aaPredicted RBP eCLIP34.02■■■■□ 3.04
ARF3-204ENST00000485410 FBLN2P98095 1184 aa34■■■■□ 3.03
ARF3-204ENST00000485410 BIVM-ERCC5R4GMW8 1640 aa34■■■■□ 3.03
ARF3-204ENST00000485410 TOP2BQ02880 1626 aa33.99■■■■□ 3.03
ARF3-204ENST00000485410 ABCA10Q8WWZ4 1543 aa33.97■■■■□ 3.03
ARF3-204ENST00000485410 SNAPC4Q5SXM2 1469 aa33.96■■■■□ 3.03
ARF3-204ENST00000485410 TRIM41Q8WV44 630 aa33.96■■■■□ 3.03
ARF3-204ENST00000485410 SYNJ1O43426 1573 aa33.96■■■■□ 3.03
ARF3-204ENST00000485410 GRIN2BQ13224 1484 aa33.95■■■■□ 3.03
ARF3-204ENST00000485410 GAPVD1Q14C86 1478 aa33.92■■■■□ 3.02
ARF3-204ENST00000485410 MAGI1Q96QZ7 1491 aaPredicted RBP33.9■■■■□ 3.02
ARF3-204ENST00000485410 PBRM1Q86U86 1689 aa33.9■■■■□ 3.02
ARF3-204ENST00000485410 ABCA5Q8WWZ7 1642 aa33.87■■■■□ 3.01
ARF3-204ENST00000485410 RIMBP3CA6NJZ7 1639 aa33.86■■■■□ 3.01
ARF3-204ENST00000485410 RIMBP3BA6NNM3 1639 aa33.86■■■■□ 3.01
ARF3-204ENST00000485410 RIMBP3Q9UFD9 1639 aa33.86■■■■□ 3.01
ARF3-204ENST00000485410 CHMP7Q8WUX9 453 aaPredicted RBP33.84■■■■□ 3.01
ARF3-204ENST00000485410 ARHGEF11O15085 1522 aa33.79■■■■□ 3
ARF3-204ENST00000485410 SYNJ2O15056 1496 aa33.78■■■■□ 3
ARF3-204ENST00000485410 CLASP1Q7Z460 1538 aa33.64■■■□□ 2.98
ARF3-204ENST00000485410 ADAMTS12P58397 1594 aa33.56■■■□□ 2.96
ARF3-204ENST00000485410 ERICH3Q5RHP9 1530 aa33.55■■■□□ 2.96
ARF3-204ENST00000485410 CYB5RLQ6IPT4 315 aa33.54■■■□□ 2.96
ARF3-204ENST00000485410 GRIN2AQ12879 1464 aa33.52■■■□□ 2.96
ARF3-204ENST00000485410 FHAD1B1AJZ9 1412 aa33.5■■■□□ 2.95
ARF3-204ENST00000485410 ARAP1Q96P48 1450 aa33.48■■■□□ 2.95
ARF3-204ENST00000485410 CEP170Q5SW79 1584 aa33.38■■■□□ 2.93
ARF3-204ENST00000485410 NUP160Q12769 1436 aa33.38■■■□□ 2.93
ARF3-204ENST00000485410 KIF27Q86VH2 1401 aa33.33■■■□□ 2.93
ARF3-204ENST00000485410 IGF1RP08069 1367 aa33.26■■■□□ 2.92
ARF3-204ENST00000485410 SHROOM2Q13796 1616 aa33.19■■■□□ 2.9
ARF3-204ENST00000485410 CUL7Q14999 1698 aa33.19■■■□□ 2.9
ARF3-204ENST00000485410 ERCC6L2Q5T890 1561 aa33.18■■■□□ 2.9
ARF3-204ENST00000485410 JPH4Q96JJ6 628 aa33.08■■■□□ 2.89
ARF3-204ENST00000485410 RUSC2Q8N2Y8 1516 aa33.07■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms