RNA–Protein interactions for RNA: ENST00000578646.5

MIB1-204, Transcript of mindbomb E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene MIB1, Length 3,306 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIB1-204ENST00000578646 NISCHQ9Y2I1 1504 aa22.82■■□□□ 1.24
MIB1-204ENST00000578646 SHROOM4Q9ULL8 1493 aa19.82■□□□□ 0.76
MIB1-204ENST00000578646 DCAF8L2P0C7V8 631 aa19.68■□□□□ 0.74
MIB1-204ENST00000578646 SUPT5HO00267 1087 aaKnown RBP19.42■□□□□ 0.7
MIB1-204ENST00000578646 CCDC180Q9P1Z9 1646 aa19.32■□□□□ 0.68
MIB1-204ENST00000578646 ZCCHC6Q5VYS8 1495 aaKnown RBP19.21■□□□□ 0.66
MIB1-204ENST00000578646 DCAF1Q9Y4B6 1507 aa18.52■□□□□ 0.56
MIB1-204ENST00000578646 CHIC1Q5VXU3 224 aa18.51■□□□□ 0.55
MIB1-204ENST00000578646 ABCC9O60706 1549 aa18.49■□□□□ 0.55
MIB1-204ENST00000578646 SCRIBQ14160 1630 aa18.39■□□□□ 0.53
MIB1-204ENST00000578646 MYO15BQ96JP2 1530 aa18.26■□□□□ 0.51
MIB1-204ENST00000578646 LOC105371045A0A1W2PR82 267 aa18.11■□□□□ 0.49
MIB1-204ENST00000578646 PCGF6Q9BYE7 350 aa18.1■□□□□ 0.49
MIB1-204ENST00000578646 RSF1Q96T23 1441 aaPredicted RBP18.05■□□□□ 0.48
MIB1-204ENST00000578646 EHMT2Q96KQ7 1210 aa18.04■□□□□ 0.48
MIB1-204ENST00000578646 HRCP23327 699 aa18.03■□□□□ 0.48
MIB1-204ENST00000578646 FAM9AQ8IZU1 332 aaPredicted RBP18.03■□□□□ 0.48
MIB1-204ENST00000578646 NACADO15069 1562 aa18.02■□□□□ 0.47
MIB1-204ENST00000578646 TRIM41Q8WV44 630 aa18■□□□□ 0.47
MIB1-204ENST00000578646 CECR2Q9BXF3 1484 aa17.92■□□□□ 0.46
MIB1-204ENST00000578646 RB1CC1Q8TDY2 1594 aa17.85■□□□□ 0.45
MIB1-204ENST00000578646 PPARGC1BQ86YN6 1023 aaKnown RBP17.83■□□□□ 0.45
MIB1-204ENST00000578646 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
MIB1-204ENST00000578646 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
MIB1-204ENST00000578646 WIZO95785 1651 aa17.69■□□□□ 0.42
MIB1-204ENST00000578646 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
MIB1-204ENST00000578646 TRIM26Q12899 539 aaPredicted RBP17.52■□□□□ 0.4
MIB1-204ENST00000578646 UNC13AQ9UPW8 1703 aa17.43■□□□□ 0.38
MIB1-204ENST00000578646 SMARCA4P51532 1647 aa17.41■□□□□ 0.38
MIB1-204ENST00000578646 TTBK1Q5TCY1 1321 aaPredicted RBP17.39■□□□□ 0.37
MIB1-204ENST00000578646 CCDC88BA6NC98 1476 aa17.35■□□□□ 0.37
MIB1-204ENST00000578646 TOP2AP11388 1531 aaKnown RBP17.33■□□□□ 0.37
MIB1-204ENST00000578646 ABCC8Q09428 1581 aa17.33■□□□□ 0.36
MIB1-204ENST00000578646 UBTFP17480 764 aaKnown RBP17.28■□□□□ 0.36
MIB1-204ENST00000578646 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
MIB1-204ENST00000578646 BICRAQ9NZM4 1560 aa17.23■□□□□ 0.35
MIB1-204ENST00000578646 ZEB1P37275 1124 aaPredicted RBP17.19■□□□□ 0.34
MIB1-204ENST00000578646 RANGAP1P46060 587 aaPredicted RBP17.18■□□□□ 0.34
MIB1-204ENST00000578646 SOGA1O94964 1423 aa17.15■□□□□ 0.34
MIB1-204ENST00000578646 CSRNP3Q8WYN3 585 aa17.13■□□□□ 0.33
MIB1-204ENST00000578646 BAZ1BQ9UIG0 1483 aaKnown RBP17.11■□□□□ 0.33
MIB1-204ENST00000578646 EIF4G1Q04637 1599 aaKnown RBP17.09■□□□□ 0.33
MIB1-204ENST00000578646 WRNQ14191 1432 aaPredicted RBP eCLIP17.07■□□□□ 0.32
MIB1-204ENST00000578646 ATAD2BQ9ULI0 1458 aa17.06■□□□□ 0.32
MIB1-204ENST00000578646 RUSC2Q8N2Y8 1516 aa17.05■□□□□ 0.32
MIB1-204ENST00000578646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.31
MIB1-204ENST00000578646 CCER1Q8TC90 406 aaPredicted RBP17.01■□□□□ 0.31
MIB1-204ENST00000578646 CEP162Q5TB80 1403 aa16.99■□□□□ 0.31
MIB1-204ENST00000578646 EEA1Q15075 1411 aa16.91■□□□□ 0.3
MIB1-204ENST00000578646 APLP2Q06481 763 aa16.91■□□□□ 0.3
MIB1-204ENST00000578646 PEG3Q9GZU2 1588 aa16.91■□□□□ 0.3
MIB1-204ENST00000578646 TNIKQ9UKE5 1360 aa16.9■□□□□ 0.3
MIB1-204ENST00000578646 GOLGA3Q08378 1498 aa16.88■□□□□ 0.29
MIB1-204ENST00000578646 SYNJ1O43426 1573 aa16.86■□□□□ 0.29
MIB1-204ENST00000578646 SCAF1Q9H7N4 1312 aaKnown RBP16.83■□□□□ 0.28
MIB1-204ENST00000578646 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
MIB1-204ENST00000578646 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
MIB1-204ENST00000578646 CLIP1P30622 1438 aa16.76■□□□□ 0.27
MIB1-204ENST00000578646 PELP1Q8IZL8 1130 aaKnown RBP16.74■□□□□ 0.27
MIB1-204ENST00000578646 RAPGEF2Q9Y4G8 1499 aa16.71■□□□□ 0.27
MIB1-204ENST00000578646 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
MIB1-204ENST00000578646 DIEXFQ68CQ4 756 aaKnown RBP16.64■□□□□ 0.25
MIB1-204ENST00000578646 HMGXB3Q12766 1538 aa16.62■□□□□ 0.25
MIB1-204ENST00000578646 TOP2BQ02880 1626 aa16.61■□□□□ 0.25
MIB1-204ENST00000578646 KIF21BO75037 1637 aa16.6■□□□□ 0.25
MIB1-204ENST00000578646 NEUROD1Q13562 356 aa16.6■□□□□ 0.25
MIB1-204ENST00000578646 ACIN1Q9UKV3 1341 aaKnown RBP16.59■□□□□ 0.25
MIB1-204ENST00000578646 CENPBP07199 599 aaPredicted RBP16.58■□□□□ 0.25
MIB1-204ENST00000578646 KIF27Q86VH2 1401 aa16.57■□□□□ 0.24
MIB1-204ENST00000578646 ATP1B4Q9UN42 357 aaPredicted RBP16.57■□□□□ 0.24
MIB1-204ENST00000578646 VPS8Q8N3P4 1428 aa16.57■□□□□ 0.24
MIB1-204ENST00000578646 CUX1P39880 1505 aa16.55■□□□□ 0.24
MIB1-204ENST00000578646 CFTRP13569 1480 aa16.54■□□□□ 0.24
MIB1-204ENST00000578646 GTF3C3Q9Y5Q9 886 aa16.53■□□□□ 0.24
MIB1-204ENST00000578646 ITGAEP38570 1179 aa16.53■□□□□ 0.24
MIB1-204ENST00000578646 YTHDC1Q96MU7 727 aaKnown RBP16.53■□□□□ 0.24
MIB1-204ENST00000578646 CADPSQ9ULU8 1353 aa16.5■□□□□ 0.23
MIB1-204ENST00000578646 CUX2O14529 1486 aa16.49■□□□□ 0.23
MIB1-204ENST00000578646 BIVM-ERCC5R4GMW8 1640 aa16.48■□□□□ 0.23
MIB1-204ENST00000578646 P3H3Q8IVL6 736 aa16.48■□□□□ 0.23
MIB1-204ENST00000578646 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
MIB1-204ENST00000578646 KANK4Q5T7N3 995 aaPredicted RBP16.44■□□□□ 0.22
MIB1-204ENST00000578646 PRXQ9BXM0 1461 aa16.43■□□□□ 0.22
MIB1-204ENST00000578646 ERICH3Q5RHP9 1530 aa16.38■□□□□ 0.21
MIB1-204ENST00000578646 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
MIB1-204ENST00000578646 CARMIL1Q5VZK9 1371 aa16.37■□□□□ 0.21
MIB1-204ENST00000578646 ZNF316A6NFI3 1004 aaPredicted RBP16.37■□□□□ 0.21
MIB1-204ENST00000578646 FANCD2Q9BXW9 1451 aa16.35■□□□□ 0.21
MIB1-204ENST00000578646 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
MIB1-204ENST00000578646 IGF1RP08069 1367 aa16.35■□□□□ 0.21
MIB1-204ENST00000578646 NESP48681 1621 aa16.33■□□□□ 0.21
MIB1-204ENST00000578646 FAM50AQ14320 339 aaKnown RBP16.29■□□□□ 0.2
MIB1-204ENST00000578646 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
MIB1-204ENST00000578646 DNAJC5BQ9UF47 199 aa16.27■□□□□ 0.2
MIB1-204ENST00000578646 ARHGAP35Q9NRY4 1499 aa16.27■□□□□ 0.19
MIB1-204ENST00000578646 PRDM2Q13029 1718 aa16.23■□□□□ 0.19
MIB1-204ENST00000578646 MIER1Q8N108 512 aa16.22■□□□□ 0.19
MIB1-204ENST00000578646 TDRD9Q8NDG6 1382 aaKnown RBP16.2■□□□□ 0.18
MIB1-204ENST00000578646 CCNB3Q8WWL7 1395 aa16.19■□□□□ 0.18
MIB1-204ENST00000578646 POLA1P09884 1462 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms