RNA–Protein interactions for RNA: ENST00000440274.5

NDUFS1-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S1, humanhuman

TSL 2 BASIC

Gene NDUFS1, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS1-204ENST00000440274 NISCHQ9Y2I1 1504 aa16.21■□□□□ 0.19
NDUFS1-204ENST00000440274 CCDC180Q9P1Z9 1646 aa14.06□□□□□ -0.16
NDUFS1-204ENST00000440274 SHROOM4Q9ULL8 1493 aa13.91□□□□□ -0.18
NDUFS1-204ENST00000440274 ZCCHC6Q5VYS8 1495 aaKnown RBP13.75□□□□□ -0.21
NDUFS1-204ENST00000440274 SUPT5HO00267 1087 aaKnown RBP13.68□□□□□ -0.22
NDUFS1-204ENST00000440274 DCAF1Q9Y4B6 1507 aa13.51□□□□□ -0.25
NDUFS1-204ENST00000440274 MYO15BQ96JP2 1530 aa13.4□□□□□ -0.26
NDUFS1-204ENST00000440274 DCAF8L2P0C7V8 631 aa13.3□□□□□ -0.28
NDUFS1-204ENST00000440274 CHIC1Q5VXU3 224 aa13.27□□□□□ -0.29
NDUFS1-204ENST00000440274 PCGF6Q9BYE7 350 aa13.2□□□□□ -0.3
NDUFS1-204ENST00000440274 HRCP23327 699 aa13.2□□□□□ -0.3
NDUFS1-204ENST00000440274 PPARGC1BQ86YN6 1023 aaKnown RBP13.17□□□□□ -0.3
NDUFS1-204ENST00000440274 LOC105371045A0A1W2PR82 267 aa13.07□□□□□ -0.32
NDUFS1-204ENST00000440274 ABCC9O60706 1549 aa13.03□□□□□ -0.32
NDUFS1-204ENST00000440274 NACADO15069 1562 aa12.88□□□□□ -0.35
NDUFS1-204ENST00000440274 SCRIBQ14160 1630 aa12.83□□□□□ -0.35
NDUFS1-204ENST00000440274 EHMT2Q96KQ7 1210 aa12.77□□□□□ -0.36
NDUFS1-204ENST00000440274 RB1CC1Q8TDY2 1594 aa12.72□□□□□ -0.37
NDUFS1-204ENST00000440274 RSF1Q96T23 1441 aaPredicted RBP12.71□□□□□ -0.37
NDUFS1-204ENST00000440274 FAM9AQ8IZU1 332 aaPredicted RBP12.71□□□□□ -0.38
NDUFS1-204ENST00000440274 TRIM26Q12899 539 aaPredicted RBP12.69□□□□□ -0.38
NDUFS1-204ENST00000440274 TRIM41Q8WV44 630 aa12.58□□□□□ -0.4
NDUFS1-204ENST00000440274 BAZ1AQ9NRL2 1556 aaPredicted RBP12.56□□□□□ -0.4
NDUFS1-204ENST00000440274 MROH2BQ7Z745 1585 aa12.51□□□□□ -0.41
NDUFS1-204ENST00000440274 UNC13AQ9UPW8 1703 aa12.51□□□□□ -0.41
NDUFS1-204ENST00000440274 WIZO95785 1651 aa12.48□□□□□ -0.41
NDUFS1-204ENST00000440274 EIF4G1Q04637 1599 aaKnown RBP12.47□□□□□ -0.41
NDUFS1-204ENST00000440274 CECR2Q9BXF3 1484 aa12.47□□□□□ -0.41
NDUFS1-204ENST00000440274 SCAF1Q9H7N4 1312 aaKnown RBP12.43□□□□□ -0.42
NDUFS1-204ENST00000440274 SMARCA4P51532 1647 aa12.4□□□□□ -0.42
NDUFS1-204ENST00000440274 TOP2AP11388 1531 aaKnown RBP12.39□□□□□ -0.43
NDUFS1-204ENST00000440274 TTBK1Q5TCY1 1321 aaPredicted RBP12.37□□□□□ -0.43
NDUFS1-204ENST00000440274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.36□□□□□ -0.43
NDUFS1-204ENST00000440274 ZEB1P37275 1124 aaPredicted RBP12.35□□□□□ -0.43
NDUFS1-204ENST00000440274 SMARCA2P51531 1590 aa12.28□□□□□ -0.44
NDUFS1-204ENST00000440274 PEG3Q9GZU2 1588 aa12.28□□□□□ -0.44
NDUFS1-204ENST00000440274 BICRAQ9NZM4 1560 aa12.24□□□□□ -0.45
NDUFS1-204ENST00000440274 CCER1Q8TC90 406 aaPredicted RBP12.22□□□□□ -0.45
NDUFS1-204ENST00000440274 NEUROD1Q13562 356 aa12.2□□□□□ -0.46
NDUFS1-204ENST00000440274 CCDC88BA6NC98 1476 aa12.18□□□□□ -0.46
NDUFS1-204ENST00000440274 ABCC8Q09428 1581 aa12.16□□□□□ -0.46
NDUFS1-204ENST00000440274 EEA1Q15075 1411 aa12.13□□□□□ -0.47
NDUFS1-204ENST00000440274 ACIN1Q9UKV3 1341 aaKnown RBP12.1□□□□□ -0.47
NDUFS1-204ENST00000440274 DIEXFQ68CQ4 756 aaKnown RBP12.09□□□□□ -0.47
NDUFS1-204ENST00000440274 GTF3C3Q9Y5Q9 886 aa12.07□□□□□ -0.48
NDUFS1-204ENST00000440274 SOGA1O94964 1423 aa12.07□□□□□ -0.48
NDUFS1-204ENST00000440274 WRNQ14191 1432 aaPredicted RBP eCLIP12.07□□□□□ -0.48
NDUFS1-204ENST00000440274 RUSC2Q8N2Y8 1516 aa12.06□□□□□ -0.48
NDUFS1-204ENST00000440274 PELP1Q8IZL8 1130 aaKnown RBP12.03□□□□□ -0.48
NDUFS1-204ENST00000440274 CEP162Q5TB80 1403 aa12.03□□□□□ -0.48
NDUFS1-204ENST00000440274 KIF21BO75037 1637 aa12□□□□□ -0.49
NDUFS1-204ENST00000440274 YTHDC1Q96MU7 727 aaKnown RBP12□□□□□ -0.49
NDUFS1-204ENST00000440274 UBTFP17480 764 aaKnown RBP11.99□□□□□ -0.49
NDUFS1-204ENST00000440274 ATAD2BQ9ULI0 1458 aa11.99□□□□□ -0.49
NDUFS1-204ENST00000440274 TNIKQ9UKE5 1360 aa11.98□□□□□ -0.49
NDUFS1-204ENST00000440274 BAZ1BQ9UIG0 1483 aaKnown RBP11.95□□□□□ -0.5
NDUFS1-204ENST00000440274 GOLGA3Q08378 1498 aa11.95□□□□□ -0.5
NDUFS1-204ENST00000440274 SYNJ1O43426 1573 aa11.95□□□□□ -0.5
NDUFS1-204ENST00000440274 RANGAP1P46060 587 aaPredicted RBP11.94□□□□□ -0.5
NDUFS1-204ENST00000440274 HNRNPUL2Q1KMD3 747 aaKnown RBP11.94□□□□□ -0.5
NDUFS1-204ENST00000440274 BIVM-ERCC5R4GMW8 1640 aa11.93□□□□□ -0.5
NDUFS1-204ENST00000440274 HMGXB3Q12766 1538 aa11.93□□□□□ -0.5
NDUFS1-204ENST00000440274 CSRNP3Q8WYN3 585 aa11.91□□□□□ -0.5
NDUFS1-204ENST00000440274 PRDM2Q13029 1718 aa11.9□□□□□ -0.5
NDUFS1-204ENST00000440274 TOP2BQ02880 1626 aa11.9□□□□□ -0.5
NDUFS1-204ENST00000440274 CEP164Q9UPV0 1460 aa11.9□□□□□ -0.5
NDUFS1-204ENST00000440274 CENPBP07199 599 aaPredicted RBP11.89□□□□□ -0.51
NDUFS1-204ENST00000440274 PABPN1Q86U42 306 aaKnown RBP eCLIP11.89□□□□□ -0.51
NDUFS1-204ENST00000440274 MIER1Q8N108 512 aa11.88□□□□□ -0.51
NDUFS1-204ENST00000440274 ZNF316A6NFI3 1004 aaPredicted RBP11.87□□□□□ -0.51
NDUFS1-204ENST00000440274 NCAPD3P42695 1498 aa11.81□□□□□ -0.52
NDUFS1-204ENST00000440274 ERICH3Q5RHP9 1530 aa11.81□□□□□ -0.52
NDUFS1-204ENST00000440274 CLIP1P30622 1438 aa11.73□□□□□ -0.53
NDUFS1-204ENST00000440274 VPS8Q8N3P4 1428 aa11.73□□□□□ -0.53
NDUFS1-204ENST00000440274 RAPGEF2Q9Y4G8 1499 aa11.73□□□□□ -0.53
NDUFS1-204ENST00000440274 CFTRP13569 1480 aa11.69□□□□□ -0.54
NDUFS1-204ENST00000440274 PRXQ9BXM0 1461 aa11.69□□□□□ -0.54
NDUFS1-204ENST00000440274 CUX1P39880 1505 aa11.68□□□□□ -0.54
NDUFS1-204ENST00000440274 APLP2Q06481 763 aa11.65□□□□□ -0.54
NDUFS1-204ENST00000440274 KANK4Q5T7N3 995 aaPredicted RBP11.64□□□□□ -0.55
NDUFS1-204ENST00000440274 KIF27Q86VH2 1401 aa11.61□□□□□ -0.55
NDUFS1-204ENST00000440274 ITGAEP38570 1179 aa11.6□□□□□ -0.55
NDUFS1-204ENST00000440274 ARAP1Q96P48 1450 aa11.59□□□□□ -0.55
NDUFS1-204ENST00000440274 DHX57Q6P158 1386 aaKnown RBP11.58□□□□□ -0.56
NDUFS1-204ENST00000440274 KCNH8Q96L42 1107 aa11.58□□□□□ -0.56
NDUFS1-204ENST00000440274 POTEDQ86YR6 584 aa11.54□□□□□ -0.56
NDUFS1-204ENST00000440274 SUPT16HQ9Y5B9 1047 aaKnown RBP11.53□□□□□ -0.56
NDUFS1-204ENST00000440274 MAP3K1Q13233 1512 aa11.53□□□□□ -0.56
NDUFS1-204ENST00000440274 CUX2O14529 1486 aa11.49□□□□□ -0.57
NDUFS1-204ENST00000440274 CADPSQ9ULU8 1353 aa11.49□□□□□ -0.57
NDUFS1-204ENST00000440274 CLSPNQ9HAW4 1339 aa11.49□□□□□ -0.57
NDUFS1-204ENST00000440274 CC2D2AQ9P2K1 1620 aa11.49□□□□□ -0.57
NDUFS1-204ENST00000440274 RRBP1Q9P2E9 1410 aaKnown RBP11.49□□□□□ -0.57
NDUFS1-204ENST00000440274 CFAP43Q8NDM7 1665 aa11.48□□□□□ -0.57
NDUFS1-204ENST00000440274 ARHGAP35Q9NRY4 1499 aa11.48□□□□□ -0.57
NDUFS1-204ENST00000440274 DNMBPQ6XZF7 1577 aa11.47□□□□□ -0.57
NDUFS1-204ENST00000440274 CUL7Q14999 1698 aa11.46□□□□□ -0.57
NDUFS1-204ENST00000440274 FGD5Q6ZNL6 1462 aa11.45□□□□□ -0.58
NDUFS1-204ENST00000440274 BCANQ96GW7 911 aa11.45□□□□□ -0.58
NDUFS1-204ENST00000440274 WDR97A6NE52 1622 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms