RNA–Protein interactions for RNA: ENST00000256682.8

ARF3-201, Transcript of ADP ribosylation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARF3, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-201ENST00000256682 NISCHQ9Y2I1 1504 aa24.53■■□□□ 1.52
ARF3-201ENST00000256682 DCAF8L2P0C7V8 631 aa22.74■■□□□ 1.23
ARF3-201ENST00000256682 SUPT5HO00267 1087 aaKnown RBP22.02■■□□□ 1.12
ARF3-201ENST00000256682 SHROOM4Q9ULL8 1493 aa21.82■■□□□ 1.08
ARF3-201ENST00000256682 EHMT2Q96KQ7 1210 aa21.44■■□□□ 1.02
ARF3-201ENST00000256682 ABCC9O60706 1549 aa21.13■□□□□ 0.97
ARF3-201ENST00000256682 CCDC180Q9P1Z9 1646 aa21.08■□□□□ 0.97
ARF3-201ENST00000256682 FAM9AQ8IZU1 332 aaPredicted RBP20.8■□□□□ 0.92
ARF3-201ENST00000256682 PCGF6Q9BYE7 350 aa20.73■□□□□ 0.91
ARF3-201ENST00000256682 TTBK1Q5TCY1 1321 aaPredicted RBP20.65■□□□□ 0.9
ARF3-201ENST00000256682 ZCCHC6Q5VYS8 1495 aaKnown RBP20.42■□□□□ 0.86
ARF3-201ENST00000256682 RANGAP1P46060 587 aaPredicted RBP20.23■□□□□ 0.83
ARF3-201ENST00000256682 PPARGC1BQ86YN6 1023 aaKnown RBP20.21■□□□□ 0.83
ARF3-201ENST00000256682 PABPN1Q86U42 306 aaKnown RBP eCLIP20.2■□□□□ 0.82
ARF3-201ENST00000256682 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
ARF3-201ENST00000256682 LOC105371045A0A1W2PR82 267 aa20.03■□□□□ 0.8
ARF3-201ENST00000256682 RB1CC1Q8TDY2 1594 aa20.02■□□□□ 0.8
ARF3-201ENST00000256682 NACADO15069 1562 aa20■□□□□ 0.79
ARF3-201ENST00000256682 SCRIBQ14160 1630 aa19.98■□□□□ 0.79
ARF3-201ENST00000256682 DCAF1Q9Y4B6 1507 aa19.9■□□□□ 0.78
ARF3-201ENST00000256682 APLP2Q06481 763 aa19.89■□□□□ 0.78
ARF3-201ENST00000256682 CCER1Q8TC90 406 aaPredicted RBP19.85■□□□□ 0.77
ARF3-201ENST00000256682 CHIC1Q5VXU3 224 aa19.81■□□□□ 0.76
ARF3-201ENST00000256682 UBTFP17480 764 aaKnown RBP19.72■□□□□ 0.75
ARF3-201ENST00000256682 MYO15BQ96JP2 1530 aa19.71■□□□□ 0.75
ARF3-201ENST00000256682 YTHDC1Q96MU7 727 aaKnown RBP19.66■□□□□ 0.74
ARF3-201ENST00000256682 HRCP23327 699 aa19.65■□□□□ 0.74
ARF3-201ENST00000256682 ATP1B4Q9UN42 357 aaPredicted RBP19.61■□□□□ 0.73
ARF3-201ENST00000256682 TRIM26Q12899 539 aaPredicted RBP19.5■□□□□ 0.71
ARF3-201ENST00000256682 ZEB1P37275 1124 aaPredicted RBP19.45■□□□□ 0.7
ARF3-201ENST00000256682 CENPBP07199 599 aaPredicted RBP19.38■□□□□ 0.69
ARF3-201ENST00000256682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.34■□□□□ 0.69
ARF3-201ENST00000256682 ITGAEP38570 1179 aa19.33■□□□□ 0.69
ARF3-201ENST00000256682 HNRNPUL2Q1KMD3 747 aaKnown RBP19.31■□□□□ 0.68
ARF3-201ENST00000256682 CECR2Q9BXF3 1484 aa19.3■□□□□ 0.68
ARF3-201ENST00000256682 PELP1Q8IZL8 1130 aaKnown RBP19.29■□□□□ 0.68
ARF3-201ENST00000256682 BICRAQ9NZM4 1560 aa19.17■□□□□ 0.66
ARF3-201ENST00000256682 UNC13AQ9UPW8 1703 aa19.15■□□□□ 0.66
ARF3-201ENST00000256682 RSF1Q96T23 1441 aaPredicted RBP19.09■□□□□ 0.65
ARF3-201ENST00000256682 CNGB1Q14028 1251 aaPredicted RBP19.05■□□□□ 0.64
ARF3-201ENST00000256682 MROH2BQ7Z745 1585 aa19.04■□□□□ 0.64
ARF3-201ENST00000256682 BAZ1AQ9NRL2 1556 aaPredicted RBP18.99■□□□□ 0.63
ARF3-201ENST00000256682 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
ARF3-201ENST00000256682 DIEXFQ68CQ4 756 aaKnown RBP18.89■□□□□ 0.62
ARF3-201ENST00000256682 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
ARF3-201ENST00000256682 POLR3GLQ9BT43 218 aa18.84■□□□□ 0.61
ARF3-201ENST00000256682 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.6
ARF3-201ENST00000256682 SMARCA4P51532 1647 aa18.83■□□□□ 0.6
ARF3-201ENST00000256682 WIZO95785 1651 aa18.81■□□□□ 0.6
ARF3-201ENST00000256682 ERICH6Q7L0X2 663 aa18.8■□□□□ 0.6
ARF3-201ENST00000256682 NEFLP07196 543 aa18.78■□□□□ 0.6
ARF3-201ENST00000256682 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.6
ARF3-201ENST00000256682 GTF3C3Q9Y5Q9 886 aa18.69■□□□□ 0.58
ARF3-201ENST00000256682 SMARCA2P51531 1590 aa18.69■□□□□ 0.58
ARF3-201ENST00000256682 CC2D2AQ9P2K1 1620 aa18.68■□□□□ 0.58
ARF3-201ENST00000256682 NEUROD1Q13562 356 aa18.64■□□□□ 0.57
ARF3-201ENST00000256682 FAM50AQ14320 339 aaKnown RBP18.62■□□□□ 0.57
ARF3-201ENST00000256682 BCANQ96GW7 911 aa18.61■□□□□ 0.57
ARF3-201ENST00000256682 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
ARF3-201ENST00000256682 CCDC88BA6NC98 1476 aa18.55■□□□□ 0.56
ARF3-201ENST00000256682 P3H3Q8IVL6 736 aa18.53■□□□□ 0.56
ARF3-201ENST00000256682 TOP2AP11388 1531 aaKnown RBP18.52■□□□□ 0.55
ARF3-201ENST00000256682 ARID3CA6NKF2 412 aa18.47■□□□□ 0.55
ARF3-201ENST00000256682 CSRNP3Q8WYN3 585 aa18.43■□□□□ 0.54
ARF3-201ENST00000256682 MYT1LQ9UL68 1186 aa18.41■□□□□ 0.54
ARF3-201ENST00000256682 ZNF316A6NFI3 1004 aaPredicted RBP18.38■□□□□ 0.53
ARF3-201ENST00000256682 TRIM52Q96A61 297 aa18.36■□□□□ 0.53
ARF3-201ENST00000256682 ACIN1Q9UKV3 1341 aaKnown RBP18.35■□□□□ 0.53
ARF3-201ENST00000256682 CADPSQ9ULU8 1353 aa18.33■□□□□ 0.53
ARF3-201ENST00000256682 HMGXB3Q12766 1538 aa18.33■□□□□ 0.52
ARF3-201ENST00000256682 ZNF326Q5BKZ1 582 aaKnown RBP18.32■□□□□ 0.52
ARF3-201ENST00000256682 PEG3Q9GZU2 1588 aa18.3■□□□□ 0.52
ARF3-201ENST00000256682 NESP48681 1621 aa18.29■□□□□ 0.52
ARF3-201ENST00000256682 ERCC6Q03468 1493 aa18.27■□□□□ 0.52
ARF3-201ENST00000256682 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
ARF3-201ENST00000256682 MYT1Q01538 1121 aa18.19■□□□□ 0.5
ARF3-201ENST00000256682 FBLN2P98095 1184 aa18.18■□□□□ 0.5
ARF3-201ENST00000256682 HIRIP3Q9BW71 556 aaPredicted RBP18.17■□□□□ 0.5
ARF3-201ENST00000256682 PDS5BQ9NTI5 1447 aa18.17■□□□□ 0.5
ARF3-201ENST00000256682 SLC4A1APQ9BWU0 796 aaKnown RBP18.16■□□□□ 0.5
ARF3-201ENST00000256682 ABCC8Q09428 1581 aa18.15■□□□□ 0.5
ARF3-201ENST00000256682 WRNQ14191 1432 aaPredicted RBP eCLIP18.14■□□□□ 0.5
ARF3-201ENST00000256682 FANCD2Q9BXW9 1451 aa18.11■□□□□ 0.49
ARF3-201ENST00000256682 CFTRP13569 1480 aa18.1■□□□□ 0.49
ARF3-201ENST00000256682 MIER1Q8N108 512 aa18.09■□□□□ 0.49
ARF3-201ENST00000256682 DDX10Q13206 875 aaKnown RBP18.09■□□□□ 0.49
ARF3-201ENST00000256682 ANP32CO43423 234 aa18.08■□□□□ 0.48
ARF3-201ENST00000256682 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
ARF3-201ENST00000256682 ZNF777Q9ULD5 760 aaPredicted RBP17.99■□□□□ 0.47
ARF3-201ENST00000256682 SENP3-EIF4A1A0A087X0R7 540 aa17.98■□□□□ 0.47
ARF3-201ENST00000256682 DAXXQ9UER7 740 aaPredicted RBP17.98■□□□□ 0.47
ARF3-201ENST00000256682 CHIC2Q9UKJ5 165 aa17.97■□□□□ 0.47
ARF3-201ENST00000256682 FKBP8Q14318 412 aa17.97■□□□□ 0.47
ARF3-201ENST00000256682 BCL11AQ9H165 835 aa17.91■□□□□ 0.46
ARF3-201ENST00000256682 CLSPNQ9HAW4 1339 aa17.9■□□□□ 0.46
ARF3-201ENST00000256682 SALL2Q9Y467 1007 aaPredicted RBP17.9■□□□□ 0.46
ARF3-201ENST00000256682 LAMC3Q9Y6N6 1575 aa17.9■□□□□ 0.46
ARF3-201ENST00000256682 TDRD9Q8NDG6 1382 aaKnown RBP17.89■□□□□ 0.45
ARF3-201ENST00000256682 IRX6P78412 446 aaPredicted RBP17.88■□□□□ 0.45
ARF3-201ENST00000256682 SOGA1O94964 1423 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms