Protein–RNA interactions for Protein: Q9UNX4

WDR3, WD repeat-containing protein 3, humanhuman

Known RBP eCLIP

Length 943 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR3Q9UNX4 EEF1D-226ENST00000529516 473 ntTSL 39.62□□□□□ -0.877e-6■■■■■ 27.7
WDR3Q9UNX4 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.97e-6■■■■■ 27.7
WDR3Q9UNX4 LRP8-208ENST00000475501 721 ntTSL 39.36□□□□□ -0.917e-6■■■■■ 27.7
WDR3Q9UNX4 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.967e-6■■■■■ 27.7
WDR3Q9UNX4 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.987e-6■■■■■ 27.7
WDR3Q9UNX4 EEF1D-255ENST00000534804 555 ntTSL 48.87□□□□□ -0.997e-6■■■■■ 27.7
WDR3Q9UNX4 SPIDR-213ENST00000521214 3577 ntTSL 28.8□□□□□ -17e-6■■■■■ 27.7
WDR3Q9UNX4 PTBP2-207ENST00000476419 1691 ntTSL 1 (best)8.72□□□□□ -1.017e-6■■■■■ 27.7
WDR3Q9UNX4 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.017e-6■■■■■ 27.7
WDR3Q9UNX4 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.037e-6■■■■■ 27.7
WDR3Q9UNX4 IGF2BP3-208ENST00000469723 556 ntTSL 58.52□□□□□ -1.057e-6■■■■■ 27.7
WDR3Q9UNX4 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC8.42□□□□□ -1.067e-6■■■■■ 27.7
WDR3Q9UNX4 SACM1L-205ENST00000441228 2013 ntTSL 28.25□□□□□ -1.097e-6■■■■■ 27.7
WDR3Q9UNX4 SPIDR-223ENST00000524033 1023 ntTSL 28.04□□□□□ -1.127e-6■■■■■ 27.7
WDR3Q9UNX4 USP36-204ENST00000586066 960 ntTSL 57.71□□□□□ -1.187e-6■■■■■ 27.7
WDR3Q9UNX4 ABHD4-210ENST00000545034 185 ntTSL 57.71□□□□□ -1.187e-6■■■■■ 27.7
WDR3Q9UNX4 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.63□□□□□ -1.197e-6■■■■■ 27.7
WDR3Q9UNX4 SACM1L-203ENST00000433336 678 ntTSL 37.59□□□□□ -1.197e-6■■■■■ 27.7
WDR3Q9UNX4 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7.5□□□□□ -1.217e-6■■■■■ 27.7
WDR3Q9UNX4 SNAP29-202ENST00000439214 681 ntTSL 37.43□□□□□ -1.227e-6■■■■■ 27.7
WDR3Q9UNX4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.247e-6■■■■■ 27.7
WDR3Q9UNX4 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.267e-6■■■■■ 27.7
WDR3Q9UNX4 SPIDR-218ENST00000522222 585 ntTSL 47.12□□□□□ -1.277e-6■■■■■ 27.7
WDR3Q9UNX4 KIF2A-210ENST00000514082 874 ntTSL 1 (best)6.94□□□□□ -1.37e-6■■■■■ 27.7
WDR3Q9UNX4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.86□□□□□ -1.317e-6■■■■■ 27.7
WDR3Q9UNX4 CFLAR-217ENST00000461422 717 ntTSL 26.56□□□□□ -1.367e-6■■■■■ 27.7
WDR3Q9UNX4 CFLAR-220ENST00000470178 516 ntTSL 26.31□□□□□ -1.47e-6■■■■■ 27.7
WDR3Q9UNX4 CFLAR-219ENST00000462763 588 ntTSL 25.77□□□□□ -1.497e-6■■■■■ 27.7
WDR3Q9UNX4 SACM1L-211ENST00000464102 3043 ntTSL 24.52□□□□□ -1.697e-6■■■■■ 27.7
WDR3Q9UNX4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.847e-6■■■■■ 27.7
WDR3Q9UNX4 EXOSC10-207ENST00000474216 2007 ntTSL 215.65■□□□□ 0.15e-6■■■■■ 26.8
WDR3Q9UNX4 EXOSC10-201ENST00000304457 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.695e-6■■■■■ 26.8
WDR3Q9UNX4 EXOSC10-202ENST00000376936 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.795e-6■■■■■ 26.8
WDR3Q9UNX4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.187e-8■■■■□ 26.4
WDR3Q9UNX4 SMYD3-217ENST00000493441 823 ntTSL 210.58□□□□□ -0.727e-8■■■■□ 26.4
WDR3Q9UNX4 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC9.85□□□□□ -0.837e-8■■■■□ 26.4
WDR3Q9UNX4 SMYD3-201ENST00000366516 1863 ntTSL 1 (best)9.64□□□□□ -0.877e-8■■■■□ 26.4
WDR3Q9UNX4 SMYD3-212ENST00000483072 466 ntTSL 29.04□□□□□ -0.967e-8■■■■□ 26.4
WDR3Q9UNX4 SMYD3-209ENST00000470510 1042 ntTSL 58.77□□□□□ -1.017e-8■■■■□ 26.4
WDR3Q9UNX4 SMYD3-202ENST00000366517 1372 ntTSL 1 (best)8.45□□□□□ -1.067e-8■■■■□ 26.4
WDR3Q9UNX4 SMYD3-213ENST00000488153 653 ntTSL 35.65□□□□□ -1.57e-8■■■■□ 26.4
WDR3Q9UNX4 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.347e-7■■■■□ 26.1
WDR3Q9UNX4 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.357e-7■■■■□ 26.1
WDR3Q9UNX4 SEC14L1-205ENST00000443798 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.567e-7■■■■□ 26.1
WDR3Q9UNX4 SEC14L1-201ENST00000392476 2957 ntAPPRIS ALT1 TSL 2 BASIC11.17□□□□□ -0.627e-7■■■■□ 26.1
WDR3Q9UNX4 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.69□□□□□ -1.343e-7■■■■□ 25.6
WDR3Q9UNX4 UGGT1-202ENST00000376723 6682 ntTSL 1 (best)16.23■□□□□ 0.191e-6■■■■□ 24.7
WDR3Q9UNX4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.381e-6■■■■□ 24.7
WDR3Q9UNX4 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.084e-6■■■■□ 24.6
WDR3Q9UNX4 CBFA2T3-210ENST00000569464 1327 ntTSL 1 (best)14.55□□□□□ -0.084e-6■■■■□ 24.6
WDR3Q9UNX4 CBFA2T3-209ENST00000569443 469 ntTSL 513.58□□□□□ -0.244e-6■■■■□ 24.6
WDR3Q9UNX4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.31■□□□□ 0.681e-6■■■■□ 24.5
WDR3Q9UNX4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.671e-6■■■■□ 24.5
WDR3Q9UNX4 PRKCB-210ENST00000498739 569 ntTSL 417.71■□□□□ 0.431e-6■■■■□ 24.5
WDR3Q9UNX4 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.061e-6■■■■□ 24.5
WDR3Q9UNX4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.035e-7■■■■□ 23.7
WDR3Q9UNX4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.2■■□□□ 1.625e-7■■■■□ 23.7
WDR3Q9UNX4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.29■■□□□ 1.485e-7■■■■□ 23.7
WDR3Q9UNX4 PKP3-206ENST00000528036 940 ntTSL 224.23■■□□□ 1.475e-7■■■■□ 23.7
WDR3Q9UNX4 PKP3-210ENST00000533249 1111 ntTSL 323.77■■□□□ 1.45e-7■■■■□ 23.7
WDR3Q9UNX4 SMC4-221ENST00000489573 1553 ntTSL 1 (best)23.01■■□□□ 1.275e-7■■■■□ 23.7
WDR3Q9UNX4 PKP3-211ENST00000534401 756 ntTSL 322.51■■□□□ 1.195e-7■■■■□ 23.7
WDR3Q9UNX4 PKP3-205ENST00000527442 847 ntTSL 321.96■■□□□ 1.115e-7■■■■□ 23.7
WDR3Q9UNX4 HNRNPUL1-219ENST00000601336 754 ntTSL 220.5■□□□□ 0.875e-7■■■■□ 23.7
WDR3Q9UNX4 SMC4-209ENST00000468653 1756 ntTSL 220.13■□□□□ 0.815e-7■■■■□ 23.7
WDR3Q9UNX4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.93■□□□□ 0.785e-7■■■■□ 23.7
WDR3Q9UNX4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.785e-7■■■■□ 23.7
WDR3Q9UNX4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.87■□□□□ 0.775e-7■■■■□ 23.7
WDR3Q9UNX4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.735e-7■■■■□ 23.7
WDR3Q9UNX4 SMC4-211ENST00000469858 1971 ntTSL 219.24■□□□□ 0.675e-7■■■■□ 23.7
WDR3Q9UNX4 PKP3-208ENST00000531857 687 ntTSL 418.1■□□□□ 0.495e-7■■■■□ 23.7
WDR3Q9UNX4 HNRNPUL1-208ENST00000595196 3043 ntTSL 1 (best)17.77■□□□□ 0.445e-7■■■■□ 23.7
WDR3Q9UNX4 PKP3-207ENST00000530695 441 ntTSL 517.74■□□□□ 0.435e-7■■■■□ 23.7
WDR3Q9UNX4 PKP3-209ENST00000533069 590 ntTSL 217.49■□□□□ 0.395e-7■■■■□ 23.7
WDR3Q9UNX4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.16■□□□□ 0.345e-7■■■■□ 23.7
WDR3Q9UNX4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.285e-7■■■■□ 23.7
WDR3Q9UNX4 HNRNPUL1-214ENST00000599719 1473 ntTSL 1 (best)16.1■□□□□ 0.175e-7■■■■□ 23.7
WDR3Q9UNX4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.83■□□□□ 0.135e-7■■■■□ 23.7
WDR3Q9UNX4 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.15e-7■■■■□ 23.7
WDR3Q9UNX4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.66■□□□□ 0.15e-7■■■■□ 23.7
WDR3Q9UNX4 AC215219.1-201ENST00000400706 1817 ntBASIC15.61■□□□□ 0.095e-7■■■■□ 23.7
WDR3Q9UNX4 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.33□□□□□ -0.125e-7■■■■□ 23.7
WDR3Q9UNX4 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.215e-7■■■■□ 23.7
WDR3Q9UNX4 HNRNPUL1-218ENST00000601309 672 ntTSL 513.19□□□□□ -0.35e-7■■■■□ 23.7
WDR3Q9UNX4 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC12.93□□□□□ -0.345e-7■■■■□ 23.7
WDR3Q9UNX4 HNRNPUL1-206ENST00000594207 816 ntTSL 512.92□□□□□ -0.345e-7■■■■□ 23.7
WDR3Q9UNX4 SMC4-210ENST00000469762 3998 ntTSL 2 BASIC10.87□□□□□ -0.675e-7■■■■□ 23.7
WDR3Q9UNX4 HNRNPUL1-211ENST00000597725 573 ntTSL 410.35□□□□□ -0.755e-7■■■■□ 23.7
WDR3Q9UNX4 SMC4-213ENST00000472282 667 ntTSL 39.61□□□□□ -0.875e-7■■■■□ 23.7
WDR3Q9UNX4 SMC4-214ENST00000472991 582 ntTSL 59.61□□□□□ -0.875e-7■■■■□ 23.7
WDR3Q9UNX4 SMC4-212ENST00000470240 724 ntTSL 38.36□□□□□ -1.075e-7■■■■□ 23.7
WDR3Q9UNX4 SMC4-219ENST00000487747 637 ntTSL 56.23□□□□□ -1.415e-7■■■■□ 23.7
WDR3Q9UNX4 SMC4-208ENST00000467468 566 ntTSL 46.04□□□□□ -1.445e-7■■■■□ 23.7
WDR3Q9UNX4 SMC4-227ENST00000497984 563 ntTSL 55.85□□□□□ -1.475e-7■■■■□ 23.7
WDR3Q9UNX4 MIR15B-201ENST00000385045 98 ntBASIC2.5□□□□□ -2.015e-7■■■■□ 23.7
WDR3Q9UNX4 CBFA2T3-204ENST00000563640 664 ntTSL 216.37■□□□□ 0.213e-6■■■■□ 23.3
WDR3Q9UNX4 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.043e-6■■■■□ 23.3
WDR3Q9UNX4 CBFA2T3-203ENST00000562719 539 ntTSL 511.34□□□□□ -0.593e-6■■■■□ 23
WDR3Q9UNX4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.43■□□□□ 0.547e-7■■■■□ 22.1
WDR3Q9UNX4 WDR1-215ENST00000510848 554 ntTSL 417.31■□□□□ 0.367e-7■■■■□ 22.1
Retrieved 100 of 1,750 protein–RNA pairs in 42.2 ms