RNA–Protein interactions for RNA: ENST00000490107.5

SMYD3-214, Transcript of SET and MYND domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMYD3, Length 1,548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-214ENST00000490107 NISCHQ9Y2I1 1504 aa37.2■■■■□ 3.55
SMYD3-214ENST00000490107 CCDC180Q9P1Z9 1646 aa33.36■■■□□ 2.93
SMYD3-214ENST00000490107 ABCC9O60706 1549 aa33.22■■■□□ 2.91
SMYD3-214ENST00000490107 RB1CC1Q8TDY2 1594 aa31.69■■■□□ 2.66
SMYD3-214ENST00000490107 NACADO15069 1562 aa31.5■■■□□ 2.63
SMYD3-214ENST00000490107 DCAF8L2P0C7V8 631 aa31.37■■■□□ 2.61
SMYD3-214ENST00000490107 MYO15BQ96JP2 1530 aa31.1■■■□□ 2.57
SMYD3-214ENST00000490107 DNAJC5BQ9UF47 199 aa31.02■■■□□ 2.56
SMYD3-214ENST00000490107 UNC13AQ9UPW8 1703 aa30.97■■■□□ 2.55
SMYD3-214ENST00000490107 PABPN1Q86U42 306 aaKnown RBP eCLIP30.93■■■□□ 2.54
SMYD3-214ENST00000490107 ZCCHC6Q5VYS8 1495 aaKnown RBP30.85■■■□□ 2.53
SMYD3-214ENST00000490107 DCAF1Q9Y4B6 1507 aa30.74■■■□□ 2.51
SMYD3-214ENST00000490107 BICRAQ9NZM4 1560 aa30.73■■■□□ 2.51
SMYD3-214ENST00000490107 SCRIBQ14160 1630 aa30.39■■■□□ 2.45
SMYD3-214ENST00000490107 SHROOM4Q9ULL8 1493 aa30.35■■■□□ 2.45
SMYD3-214ENST00000490107 CC2D2AQ9P2K1 1620 aa30.01■■■□□ 2.39
SMYD3-214ENST00000490107 EIF4G1Q04637 1599 aaKnown RBP29.98■■■□□ 2.39
SMYD3-214ENST00000490107 CECR2Q9BXF3 1484 aa29.91■■■□□ 2.38
SMYD3-214ENST00000490107 NCAPD3P42695 1498 aa29.07■■■□□ 2.24
SMYD3-214ENST00000490107 SMARCA4P51532 1647 aa29■■■□□ 2.23
SMYD3-214ENST00000490107 ATAD2BQ9ULI0 1458 aa28.99■■■□□ 2.23
SMYD3-214ENST00000490107 SMARCA2P51531 1590 aa28.93■■■□□ 2.22
SMYD3-214ENST00000490107 BAZ1AQ9NRL2 1556 aaPredicted RBP28.89■■■□□ 2.21
SMYD3-214ENST00000490107 HMGXB3Q12766 1538 aa28.87■■■□□ 2.21
SMYD3-214ENST00000490107 BAZ1BQ9UIG0 1483 aaKnown RBP28.73■■■□□ 2.19
SMYD3-214ENST00000490107 PEG3Q9GZU2 1588 aa28.71■■■□□ 2.19
SMYD3-214ENST00000490107 ERCC6Q03468 1493 aa28.69■■■□□ 2.18
SMYD3-214ENST00000490107 MROH2BQ7Z745 1585 aa28.66■■■□□ 2.18
SMYD3-214ENST00000490107 CUX2O14529 1486 aa28.59■■■□□ 2.17
SMYD3-214ENST00000490107 NESP48681 1621 aa28.56■■■□□ 2.16
SMYD3-214ENST00000490107 DNAJC5Q9H3Z4 198 aa28.43■■■□□ 2.14
SMYD3-214ENST00000490107 LAMC3Q9Y6N6 1575 aa28.41■■■□□ 2.14
SMYD3-214ENST00000490107 WIZO95785 1651 aa28.34■■■□□ 2.13
SMYD3-214ENST00000490107 THOC2Q8NI27 1593 aaKnown RBP28.26■■■□□ 2.11
SMYD3-214ENST00000490107 PDS5BQ9NTI5 1447 aa28.24■■■□□ 2.11
SMYD3-214ENST00000490107 KIF21AQ7Z4S6 1674 aa28.21■■■□□ 2.11
SMYD3-214ENST00000490107 CADPSQ9ULU8 1353 aa28.19■■■□□ 2.1
SMYD3-214ENST00000490107 RSF1Q96T23 1441 aaPredicted RBP28.11■■■□□ 2.09
SMYD3-214ENST00000490107 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
SMYD3-214ENST00000490107 MRC2Q9UBG0 1479 aa27.98■■■□□ 2.07
SMYD3-214ENST00000490107 WDR62O43379 1518 aa27.9■■■□□ 2.06
SMYD3-214ENST00000490107 CEP164Q9UPV0 1460 aa27.9■■■□□ 2.06
SMYD3-214ENST00000490107 CFTRP13569 1480 aa27.89■■■□□ 2.06
SMYD3-214ENST00000490107 FANCD2Q9BXW9 1451 aa27.87■■■□□ 2.05
SMYD3-214ENST00000490107 CCDC88BA6NC98 1476 aa27.67■■■□□ 2.02
SMYD3-214ENST00000490107 PRDM2Q13029 1718 aa27.65■■■□□ 2.02
SMYD3-214ENST00000490107 URB2Q14146 1524 aaKnown RBP27.62■■■□□ 2.01
SMYD3-214ENST00000490107 TOPBP1Q92547 1522 aa27.36■■□□□ 1.97
SMYD3-214ENST00000490107 IFT140Q96RY7 1462 aa27.33■■□□□ 1.97
SMYD3-214ENST00000490107 SUPT5HO00267 1087 aaKnown RBP27.33■■□□□ 1.97
SMYD3-214ENST00000490107 ABCC8Q09428 1581 aa27.33■■□□□ 1.97
SMYD3-214ENST00000490107 OSCARQ8IYS5 282 aa27.31■■□□□ 1.96
SMYD3-214ENST00000490107 DNMBPQ6XZF7 1577 aa27.28■■□□□ 1.96
SMYD3-214ENST00000490107 ZNF608Q9ULD9 1512 aaPredicted RBP27.26■■□□□ 1.95
SMYD3-214ENST00000490107 TRIM41Q8WV44 630 aa27.24■■□□□ 1.95
SMYD3-214ENST00000490107 EIF4G3O43432 1585 aaKnown RBP27.13■■□□□ 1.93
SMYD3-214ENST00000490107 TARBP1Q13395 1621 aaKnown RBP27.1■■□□□ 1.93
SMYD3-214ENST00000490107 POLA1P09884 1462 aaPredicted RBP27.08■■□□□ 1.93
SMYD3-214ENST00000490107 AQRO60306 1485 aaKnown RBP eCLIP27.04■■□□□ 1.921e-6■■■■□ 20.6
SMYD3-214ENST00000490107 RAD54L2Q9Y4B4 1467 aa26.98■■□□□ 1.91
SMYD3-214ENST00000490107 SOGA1O94964 1423 aa26.98■■□□□ 1.91
SMYD3-214ENST00000490107 FGD5Q6ZNL6 1462 aa26.94■■□□□ 1.9
SMYD3-214ENST00000490107 RIMBP3CA6NJZ7 1639 aa26.93■■□□□ 1.9
SMYD3-214ENST00000490107 RIMBP3BA6NNM3 1639 aa26.93■■□□□ 1.9
SMYD3-214ENST00000490107 RIMBP3Q9UFD9 1639 aa26.93■■□□□ 1.9
SMYD3-214ENST00000490107 CUX1P39880 1505 aa26.93■■□□□ 1.9
SMYD3-214ENST00000490107 CHD1O14646 1710 aa26.92■■□□□ 1.9
SMYD3-214ENST00000490107 TDRD9Q8NDG6 1382 aaKnown RBP26.89■■□□□ 1.9
SMYD3-214ENST00000490107 WDR97A6NE52 1622 aa26.86■■□□□ 1.89
SMYD3-214ENST00000490107 ARHGEF11O15085 1522 aa26.86■■□□□ 1.89
SMYD3-214ENST00000490107 FBLN2P98095 1184 aa26.85■■□□□ 1.89
SMYD3-214ENST00000490107 SNAPC4Q5SXM2 1469 aa26.77■■□□□ 1.88
SMYD3-214ENST00000490107 GRIN2BQ13224 1484 aa26.73■■□□□ 1.87
SMYD3-214ENST00000490107 MAGI1Q96QZ7 1491 aaPredicted RBP26.72■■□□□ 1.87
SMYD3-214ENST00000490107 CHMP7Q8WUX9 453 aaPredicted RBP26.68■■□□□ 1.86
SMYD3-214ENST00000490107 CYB5RLQ6IPT4 315 aa26.65■■□□□ 1.86
SMYD3-214ENST00000490107 GAPVD1Q14C86 1478 aa26.65■■□□□ 1.86
SMYD3-214ENST00000490107 PBRM1Q86U86 1689 aa26.64■■□□□ 1.86
SMYD3-214ENST00000490107 ABCA10Q8WWZ4 1543 aa26.63■■□□□ 1.85
SMYD3-214ENST00000490107 SYNJ2O15056 1496 aa26.62■■□□□ 1.85
SMYD3-214ENST00000490107 SYNJ1O43426 1573 aa26.61■■□□□ 1.85
SMYD3-214ENST00000490107 CLASP1Q7Z460 1538 aa26.6■■□□□ 1.85
SMYD3-214ENST00000490107 ARAP1Q96P48 1450 aa26.6■■□□□ 1.85
SMYD3-214ENST00000490107 ABCA5Q8WWZ7 1642 aa26.59■■□□□ 1.85
SMYD3-214ENST00000490107 WRNQ14191 1432 aaPredicted RBP eCLIP26.56■■□□□ 1.845e-6■■■■■ 29.2
SMYD3-214ENST00000490107 BIVM-ERCC5R4GMW8 1640 aa26.54■■□□□ 1.84
SMYD3-214ENST00000490107 TOP2BQ02880 1626 aa26.53■■□□□ 1.84
SMYD3-214ENST00000490107 ADAMTS12P58397 1594 aa26.38■■□□□ 1.81
SMYD3-214ENST00000490107 GRIN2AQ12879 1464 aa26.38■■□□□ 1.81
SMYD3-214ENST00000490107 TRHP20396 242 aaPredicted RBP26.34■■□□□ 1.81
SMYD3-214ENST00000490107 FHAD1B1AJZ9 1412 aa26.32■■□□□ 1.8
SMYD3-214ENST00000490107 ERICH3Q5RHP9 1530 aa26.31■■□□□ 1.8
SMYD3-214ENST00000490107 NUP160Q12769 1436 aa26.28■■□□□ 1.8
SMYD3-214ENST00000490107 CEP170Q5SW79 1584 aa26.27■■□□□ 1.8
SMYD3-214ENST00000490107 ERCC6L2Q5T890 1561 aa26.19■■□□□ 1.78
SMYD3-214ENST00000490107 SHROOM2Q13796 1616 aa26.15■■□□□ 1.78
SMYD3-214ENST00000490107 KIF27Q86VH2 1401 aa26.03■■□□□ 1.76
SMYD3-214ENST00000490107 PRG4Q92954 1404 aaPredicted RBP26.03■■□□□ 1.76
SMYD3-214ENST00000490107 JPH4Q96JJ6 628 aa26.02■■□□□ 1.76
SMYD3-214ENST00000490107 RUSC2Q8N2Y8 1516 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms