RNA–Protein interactions for RNA: ENST00000609116.5

PTBP2-211, Transcript of polypyrimidine tract binding protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP2, Length 12,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP2-211ENST00000609116 NISCHQ9Y2I1 1504 aa7.32□□□□□ -1.24
PTBP2-211ENST00000609116 CCDC180Q9P1Z9 1646 aa6.58□□□□□ -1.36
PTBP2-211ENST00000609116 ZCCHC6Q5VYS8 1495 aaKnown RBP6.2□□□□□ -1.42
PTBP2-211ENST00000609116 DCAF1Q9Y4B6 1507 aa6.13□□□□□ -1.43
PTBP2-211ENST00000609116 MYO15BQ96JP2 1530 aa6.06□□□□□ -1.44
PTBP2-211ENST00000609116 NACADO15069 1562 aa5.94□□□□□ -1.46
PTBP2-211ENST00000609116 UNC13AQ9UPW8 1703 aa5.92□□□□□ -1.46
PTBP2-211ENST00000609116 ABCC9O60706 1549 aa5.92□□□□□ -1.46
PTBP2-211ENST00000609116 SHROOM4Q9ULL8 1493 aa5.88□□□□□ -1.47
PTBP2-211ENST00000609116 RB1CC1Q8TDY2 1594 aa5.86□□□□□ -1.47
PTBP2-211ENST00000609116 SCRIBQ14160 1630 aa5.85□□□□□ -1.47
PTBP2-211ENST00000609116 DCAF8L2P0C7V8 631 aa5.79□□□□□ -1.48
PTBP2-211ENST00000609116 SUPT5HO00267 1087 aaKnown RBP5.75□□□□□ -1.49
PTBP2-211ENST00000609116 BAZ1AQ9NRL2 1556 aaPredicted RBP5.74□□□□□ -1.49
PTBP2-211ENST00000609116 SMARCA4P51532 1647 aa5.7□□□□□ -1.5
PTBP2-211ENST00000609116 PRDM2Q13029 1718 aa5.69□□□□□ -1.5
PTBP2-211ENST00000609116 WIZO95785 1651 aa5.68□□□□□ -1.5
PTBP2-211ENST00000609116 PEG3Q9GZU2 1588 aa5.65□□□□□ -1.51
PTBP2-211ENST00000609116 RSF1Q96T23 1441 aaPredicted RBP5.64□□□□□ -1.51
PTBP2-211ENST00000609116 TOP2AP11388 1531 aaKnown RBP5.61□□□□□ -1.51
PTBP2-211ENST00000609116 MROH2BQ7Z745 1585 aa5.6□□□□□ -1.51
PTBP2-211ENST00000609116 BICRAQ9NZM4 1560 aa5.59□□□□□ -1.51
PTBP2-211ENST00000609116 SMARCA2P51531 1590 aa5.59□□□□□ -1.52
PTBP2-211ENST00000609116 EIF4G1Q04637 1599 aaKnown RBP5.58□□□□□ -1.52
PTBP2-211ENST00000609116 CHIC1Q5VXU3 224 aa5.56□□□□□ -1.52
PTBP2-211ENST00000609116 CECR2Q9BXF3 1484 aa5.56□□□□□ -1.52
PTBP2-211ENST00000609116 HMGXB3Q12766 1538 aa5.52□□□□□ -1.53
PTBP2-211ENST00000609116 BIVM-ERCC5R4GMW8 1640 aa5.47□□□□□ -1.53
PTBP2-211ENST00000609116 BAZ1BQ9UIG0 1483 aaKnown RBP5.47□□□□□ -1.53
PTBP2-211ENST00000609116 TRIM41Q8WV44 630 aa5.47□□□□□ -1.53
PTBP2-211ENST00000609116 EEA1Q15075 1411 aa5.44□□□□□ -1.54
PTBP2-211ENST00000609116 CCDC88BA6NC98 1476 aa5.44□□□□□ -1.54
PTBP2-211ENST00000609116 TOP2BQ02880 1626 aa5.43□□□□□ -1.54
PTBP2-211ENST00000609116 ABCC8Q09428 1581 aa5.43□□□□□ -1.54
PTBP2-211ENST00000609116 KIF21BO75037 1637 aa5.43□□□□□ -1.54
PTBP2-211ENST00000609116 ATAD2BQ9ULI0 1458 aa5.4□□□□□ -1.55
PTBP2-211ENST00000609116 SYNJ1O43426 1573 aa5.38□□□□□ -1.55
PTBP2-211ENST00000609116 CTTNBP2Q8WZ74 1663 aa5.36□□□□□ -1.55
PTBP2-211ENST00000609116 WRNQ14191 1432 aaPredicted RBP eCLIP5.36□□□□□ -1.55
PTBP2-211ENST00000609116 ERICH3Q5RHP9 1530 aa5.36□□□□□ -1.55
PTBP2-211ENST00000609116 NCAPD3P42695 1498 aa5.36□□□□□ -1.55
PTBP2-211ENST00000609116 CEP164Q9UPV0 1460 aa5.34□□□□□ -1.55
PTBP2-211ENST00000609116 TRIM26Q12899 539 aaPredicted RBP5.34□□□□□ -1.55
PTBP2-211ENST00000609116 CC2D2AQ9P2K1 1620 aa5.34□□□□□ -1.56
PTBP2-211ENST00000609116 KIF21AQ7Z4S6 1674 aa5.34□□□□□ -1.56
PTBP2-211ENST00000609116 GOLGA3Q08378 1498 aa5.33□□□□□ -1.56
PTBP2-211ENST00000609116 PCGF6Q9BYE7 350 aa5.32□□□□□ -1.56
PTBP2-211ENST00000609116 WDR97A6NE52 1622 aa5.32□□□□□ -1.56
PTBP2-211ENST00000609116 CUL7Q14999 1698 aa5.32□□□□□ -1.56
PTBP2-211ENST00000609116 CFTRP13569 1480 aa5.32□□□□□ -1.56
PTBP2-211ENST00000609116 LAMC3Q9Y6N6 1575 aa5.3□□□□□ -1.56
PTBP2-211ENST00000609116 CEP162Q5TB80 1403 aa5.29□□□□□ -1.56
PTBP2-211ENST00000609116 LOC105371045A0A1W2PR82 267 aa5.29□□□□□ -1.56
PTBP2-211ENST00000609116 HRCP23327 699 aa5.29□□□□□ -1.56
PTBP2-211ENST00000609116 ZEB1P37275 1124 aaPredicted RBP5.28□□□□□ -1.56
PTBP2-211ENST00000609116 CFAP43Q8NDM7 1665 aa5.28□□□□□ -1.56
PTBP2-211ENST00000609116 TNIKQ9UKE5 1360 aa5.27□□□□□ -1.57
PTBP2-211ENST00000609116 PABPN1Q86U42 306 aaKnown RBP eCLIP5.27□□□□□ -1.57
PTBP2-211ENST00000609116 DNMBPQ6XZF7 1577 aa5.27□□□□□ -1.57
PTBP2-211ENST00000609116 SOGA1O94964 1423 aa5.26□□□□□ -1.57
PTBP2-211ENST00000609116 PBRM1Q86U86 1689 aa5.25□□□□□ -1.57
PTBP2-211ENST00000609116 FAM9AQ8IZU1 332 aaPredicted RBP5.25□□□□□ -1.57
PTBP2-211ENST00000609116 CUX1P39880 1505 aa5.24□□□□□ -1.57
PTBP2-211ENST00000609116 CLIP1P30622 1438 aa5.24□□□□□ -1.57
PTBP2-211ENST00000609116 KIF27Q86VH2 1401 aa5.24□□□□□ -1.57
PTBP2-211ENST00000609116 VPS8Q8N3P4 1428 aa5.23□□□□□ -1.57
PTBP2-211ENST00000609116 ABCA5Q8WWZ7 1642 aa5.22□□□□□ -1.57
PTBP2-211ENST00000609116 PRXQ9BXM0 1461 aa5.21□□□□□ -1.58
PTBP2-211ENST00000609116 RAPGEF2Q9Y4G8 1499 aa5.2□□□□□ -1.58
PTBP2-211ENST00000609116 CSRNP3Q8WYN3 585 aa5.2□□□□□ -1.58
PTBP2-211ENST00000609116 EFCAB5A4FU69 1503 aa5.2□□□□□ -1.58
PTBP2-211ENST00000609116 THOC2Q8NI27 1593 aaKnown RBP5.2□□□□□ -1.58
PTBP2-211ENST00000609116 UBTFP17480 764 aaKnown RBP5.19□□□□□ -1.58
PTBP2-211ENST00000609116 CADPSQ9ULU8 1353 aa5.19□□□□□ -1.58
PTBP2-211ENST00000609116 LRRIQ1Q96JM4 1722 aa5.19□□□□□ -1.58
PTBP2-211ENST00000609116 RUSC2Q8N2Y8 1516 aa5.18□□□□□ -1.58
PTBP2-211ENST00000609116 MAP3K1Q13233 1512 aa5.18□□□□□ -1.58
PTBP2-211ENST00000609116 APLP2Q06481 763 aa5.18□□□□□ -1.58
PTBP2-211ENST00000609116 FGD5Q6ZNL6 1462 aa5.18□□□□□ -1.58
PTBP2-211ENST00000609116 ABCA10Q8WWZ4 1543 aa5.18□□□□□ -1.58
PTBP2-211ENST00000609116 TIAM1Q13009 1591 aa5.17□□□□□ -1.58
PTBP2-211ENST00000609116 FANCD2Q9BXW9 1451 aa5.17□□□□□ -1.58
PTBP2-211ENST00000609116 SUPT6HQ7KZ85 1726 aaKnown RBP5.17□□□□□ -1.58
PTBP2-211ENST00000609116 POLA1P09884 1462 aaPredicted RBP5.17□□□□□ -1.58
PTBP2-211ENST00000609116 FHAD1B1AJZ9 1412 aa5.16□□□□□ -1.58
PTBP2-211ENST00000609116 TARBP1Q13395 1621 aaKnown RBP5.16□□□□□ -1.58
PTBP2-211ENST00000609116 TOPBP1Q92547 1522 aa5.16□□□□□ -1.58
PTBP2-211ENST00000609116 FYCO1Q9BQS8 1478 aa5.14□□□□□ -1.59
PTBP2-211ENST00000609116 SAMD9Q5K651 1589 aa5.14□□□□□ -1.59
PTBP2-211ENST00000609116 POLR1AO95602 1720 aaPredicted RBP5.14□□□□□ -1.59
PTBP2-211ENST00000609116 CUX2O14529 1486 aa5.14□□□□□ -1.59
PTBP2-211ENST00000609116 PDS5BQ9NTI5 1447 aa5.14□□□□□ -1.59
PTBP2-211ENST00000609116 CLSPNQ9HAW4 1339 aa5.13□□□□□ -1.59
PTBP2-211ENST00000609116 ARHGAP35Q9NRY4 1499 aa5.12□□□□□ -1.59
PTBP2-211ENST00000609116 ITSN2Q9NZM3 1697 aa5.12□□□□□ -1.59
PTBP2-211ENST00000609116 PCF11O94913 1555 aaKnown RBP5.12□□□□□ -1.59
PTBP2-211ENST00000609116 CCER1Q8TC90 406 aaPredicted RBP5.12□□□□□ -1.59
PTBP2-211ENST00000609116 GCC2Q8IWJ2 1684 aa5.12□□□□□ -1.59
PTBP2-211ENST00000609116 IQGAP2Q13576 1575 aa5.12□□□□□ -1.59
PTBP2-211ENST00000609116 HECW1Q76N89 1606 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms