RNA–Protein interactions for RNA: ENST00000488153.5

SMYD3-213, Transcript of SET and MYND domain containing 3, humanhuman

TSL 3

Gene SMYD3, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-213ENST00000488153 AEBP2Q6ZN18 517 aaPredicted RBP17.93■□□□□ 0.46
SMYD3-213ENST00000488153 CHIC1Q5VXU3 224 aa17.26■□□□□ 0.35
SMYD3-213ENST00000488153 PHF23Q9BUL5 403 aaPredicted RBP15.23■□□□□ 0.03
SMYD3-213ENST00000488153 SENP3Q9H4L4 574 aaPredicted RBP15.12■□□□□ 0.01
SMYD3-213ENST00000488153 FOXD1Q16676 465 aa14.13□□□□□ -0.15
SMYD3-213ENST00000488153 PLPPR3Q6T4P5 718 aa13.88□□□□□ -0.19
SMYD3-213ENST00000488153 PPP6R1Q9UPN7 881 aa13.49□□□□□ -0.25
SMYD3-213ENST00000488153 ADRA2BP18089 450 aa13.43□□□□□ -0.26
SMYD3-213ENST00000488153 PIAS4Q8N2W9 510 aaPredicted RBP13.23□□□□□ -0.29
SMYD3-213ENST00000488153 MSH5O43196 834 aa13.01□□□□□ -0.33
SMYD3-213ENST00000488153 POTEDQ86YR6 584 aa12.93□□□□□ -0.34
SMYD3-213ENST00000488153 NISCHQ9Y2I1 1504 aa12.88□□□□□ -0.35
SMYD3-213ENST00000488153 MAPK8IP2Q13387 824 aaPredicted RBP12.26□□□□□ -0.45
SMYD3-213ENST00000488153 PPP4R3CPQ6ZMV5 832 aa12.24□□□□□ -0.45
SMYD3-213ENST00000488153 SCAF1Q9H7N4 1312 aaKnown RBP12.13□□□□□ -0.47
SMYD3-213ENST00000488153 DMRT2Q9Y5R5 561 aa12.07□□□□□ -0.48
SMYD3-213ENST00000488153 DNAJC5BQ9UF47 199 aa11.97□□□□□ -0.49
SMYD3-213ENST00000488153 CNKSR2Q8WXI2 1034 aa11.91□□□□□ -0.5
SMYD3-213ENST00000488153 DNAJC5Q9H3Z4 198 aa11.84□□□□□ -0.51
SMYD3-213ENST00000488153 ABCC9O60706 1549 aa11.81□□□□□ -0.52
SMYD3-213ENST00000488153 KCNA4P22459 653 aa11.79□□□□□ -0.52
SMYD3-213ENST00000488153 HOXD11P31277 338 aaPredicted RBP11.76□□□□□ -0.53
SMYD3-213ENST00000488153 NCBP3Q53F19 620 aaKnown RBP11.76□□□□□ -0.53
SMYD3-213ENST00000488153 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
SMYD3-213ENST00000488153 RNF216Q9NWF9 866 aaPredicted RBP11.72□□□□□ -0.53
SMYD3-213ENST00000488153 DCAF8L1A6NGE4 600 aa11.5□□□□□ -0.57
SMYD3-213ENST00000488153 CCDC180Q9P1Z9 1646 aa11.41□□□□□ -0.58
SMYD3-213ENST00000488153 RNF39Q9H2S5 420 aa11.19□□□□□ -0.62
SMYD3-213ENST00000488153 SLC4A2P04920 1241 aa11.15□□□□□ -0.62
SMYD3-213ENST00000488153 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.13□□□□□ -0.639e-7■□□□□ 8.5
SMYD3-213ENST00000488153 SLC4A1APQ9BWU0 796 aaKnown RBP11.13□□□□□ -0.63
SMYD3-213ENST00000488153 U3KPZ7 1027 aaPredicted RBP11.02□□□□□ -0.65
SMYD3-213ENST00000488153 C1QBPQ07021 282 aaKnown RBP10.99□□□□□ -0.65
SMYD3-213ENST00000488153 CACNB1Q02641 598 aaPredicted RBP10.97□□□□□ -0.65
SMYD3-213ENST00000488153 ZBTB22O15209 634 aa10.91□□□□□ -0.66
SMYD3-213ENST00000488153 TRIM41Q8WV44 630 aa10.87□□□□□ -0.67
SMYD3-213ENST00000488153 FOXD4L1Q9NU39 408 aa10.85□□□□□ -0.67
SMYD3-213ENST00000488153 DCAF8L2P0C7V8 631 aa10.84□□□□□ -0.67
SMYD3-213ENST00000488153 RB1CC1Q8TDY2 1594 aa10.81□□□□□ -0.68
SMYD3-213ENST00000488153 MYCNP04198 464 aaPredicted RBP10.78□□□□□ -0.68
SMYD3-213ENST00000488153 SPINK5Q9NQ38 1064 aaPredicted RBP10.78□□□□□ -0.68
SMYD3-213ENST00000488153 CECR2Q9BXF3 1484 aa10.78□□□□□ -0.68
SMYD3-213ENST00000488153 PABPN1Q86U42 306 aaKnown RBP eCLIP10.77□□□□□ -0.69
SMYD3-213ENST00000488153 ZCCHC6Q5VYS8 1495 aaKnown RBP10.73□□□□□ -0.69
SMYD3-213ENST00000488153 NACADO15069 1562 aa10.72□□□□□ -0.69
SMYD3-213ENST00000488153 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.69□□□□□ -0.7
SMYD3-213ENST00000488153 HNRNPUL2Q1KMD3 747 aaKnown RBP10.69□□□□□ -0.7
SMYD3-213ENST00000488153 CUX2O14529 1486 aa10.68□□□□□ -0.7
SMYD3-213ENST00000488153 SAMD1Q6SPF0 538 aaPredicted RBP10.68□□□□□ -0.7
SMYD3-213ENST00000488153 CAPN15O75808 1086 aa10.67□□□□□ -0.7
SMYD3-213ENST00000488153 CSRNP3Q8WYN3 585 aa10.64□□□□□ -0.71
SMYD3-213ENST00000488153 CC2D2AQ9P2K1 1620 aa10.63□□□□□ -0.71
SMYD3-213ENST00000488153 EHMT2Q96KQ7 1210 aa10.63□□□□□ -0.71
SMYD3-213ENST00000488153 MYO15BQ96JP2 1530 aa10.62□□□□□ -0.71
SMYD3-213ENST00000488153 ATF5Q9Y2D1 282 aaPredicted RBP10.61□□□□□ -0.71
SMYD3-213ENST00000488153 DCAF1Q9Y4B6 1507 aa10.61□□□□□ -0.71
SMYD3-213ENST00000488153 DSG3P32926 999 aa10.59□□□□□ -0.71
SMYD3-213ENST00000488153 TRHP20396 242 aaPredicted RBP10.58□□□□□ -0.72
SMYD3-213ENST00000488153 APLP2Q06481 763 aa10.58□□□□□ -0.72
SMYD3-213ENST00000488153 ZNF219Q9P2Y4 722 aaPredicted RBP10.55□□□□□ -0.72
SMYD3-213ENST00000488153 UNC13AQ9UPW8 1703 aa10.51□□□□□ -0.73
SMYD3-213ENST00000488153 ABCB7O75027 752 aa10.5□□□□□ -0.73
SMYD3-213ENST00000488153 BICRAQ9NZM4 1560 aa10.49□□□□□ -0.73
SMYD3-213ENST00000488153 SCRIBQ14160 1630 aa10.49□□□□□ -0.73
SMYD3-213ENST00000488153 ATXN8OSP0DMR3 200 aa10.45□□□□□ -0.74
SMYD3-213ENST00000488153 POLA2Q14181 598 aa10.38□□□□□ -0.75
SMYD3-213ENST00000488153 ILDR1Q86SU0 546 aaPredicted RBP10.35□□□□□ -0.75
SMYD3-213ENST00000488153 EIF4G1Q04637 1599 aaKnown RBP10.35□□□□□ -0.75
SMYD3-213ENST00000488153 SHROOM4Q9ULL8 1493 aa10.33□□□□□ -0.76
SMYD3-213ENST00000488153 ERCC6Q03468 1493 aa10.31□□□□□ -0.76
SMYD3-213ENST00000488153 MKRN4PQ13434 485 aaPredicted RBP10.13□□□□□ -0.79
SMYD3-213ENST00000488153 ZBTB12Q9Y330 459 aaPredicted RBP10.12□□□□□ -0.79
SMYD3-213ENST00000488153 OSCARQ8IYS5 282 aa10.07□□□□□ -0.8
SMYD3-213ENST00000488153 POTEHQ6S545 545 aa10.05□□□□□ -0.8
SMYD3-213ENST00000488153 FBLN2P98095 1184 aa10.01□□□□□ -0.81
SMYD3-213ENST00000488153 THOC2Q8NI27 1593 aaKnown RBP10□□□□□ -0.81
SMYD3-213ENST00000488153 RBM42Q9BTD8 480 aaKnown RBP9.99□□□□□ -0.81
SMYD3-213ENST00000488153 SMARCA4P51532 1647 aa9.99□□□□□ -0.81
SMYD3-213ENST00000488153 BAZ1AQ9NRL2 1556 aaPredicted RBP9.97□□□□□ -0.81
SMYD3-213ENST00000488153 RIMBP3CA6NJZ7 1639 aa9.97□□□□□ -0.81
SMYD3-213ENST00000488153 RIMBP3BA6NNM3 1639 aa9.97□□□□□ -0.81
SMYD3-213ENST00000488153 RIMBP3Q9UFD9 1639 aa9.97□□□□□ -0.81
SMYD3-213ENST00000488153 MROH2BQ7Z745 1585 aa9.96□□□□□ -0.82
SMYD3-213ENST00000488153 ATAD2BQ9ULI0 1458 aa9.92□□□□□ -0.82
SMYD3-213ENST00000488153 SMARCA2P51531 1590 aa9.89□□□□□ -0.83
SMYD3-213ENST00000488153 SPDYE2BA6NHP3 402 aa9.89□□□□□ -0.83
SMYD3-213ENST00000488153 SPDYE6P0CI01 402 aa9.89□□□□□ -0.83
SMYD3-213ENST00000488153 SPDYE2Q495Y8 402 aa9.89□□□□□ -0.83
SMYD3-213ENST00000488153 NCAPD3P42695 1498 aa9.89□□□□□ -0.83
SMYD3-213ENST00000488153 AKT1S1Q96B36 256 aa9.87□□□□□ -0.83
SMYD3-213ENST00000488153 WIZO95785 1651 aa9.86□□□□□ -0.83
SMYD3-213ENST00000488153 BAZ1BQ9UIG0 1483 aaKnown RBP9.85□□□□□ -0.83
SMYD3-213ENST00000488153 PEG3Q9GZU2 1588 aa9.85□□□□□ -0.83
SMYD3-213ENST00000488153 RSF1Q96T23 1441 aaPredicted RBP9.84□□□□□ -0.83
SMYD3-213ENST00000488153 HMGXB3Q12766 1538 aa9.84□□□□□ -0.83
SMYD3-213ENST00000488153 SSUH2Q9Y2M2 353 aa9.84□□□□□ -0.83
SMYD3-213ENST00000488153 ARHGEF11O15085 1522 aa9.83□□□□□ -0.84
SMYD3-213ENST00000488153 NESP48681 1621 aa9.82□□□□□ -0.84
SMYD3-213ENST00000488153 REM2Q8IYK8 340 aaPredicted RBP9.81□□□□□ -0.84
SMYD3-213ENST00000488153 ZNF692Q9BU19 519 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms