RNA–Protein interactions for RNA: ENST00000366517.5

SMYD3-202, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-202ENST00000366517 AEBP2Q6ZN18 517 aaPredicted RBP24.13■■□□□ 1.45
SMYD3-202ENST00000366517 CHIC1Q5VXU3 224 aa23.53■■□□□ 1.36
SMYD3-202ENST00000366517 PHF23Q9BUL5 403 aaPredicted RBP20.64■□□□□ 0.89
SMYD3-202ENST00000366517 SENP3Q9H4L4 574 aaPredicted RBP20.61■□□□□ 0.89
SMYD3-202ENST00000366517 PLPPR3Q6T4P5 718 aa19.15■□□□□ 0.66
SMYD3-202ENST00000366517 FOXD1Q16676 465 aa19.06■□□□□ 0.64
SMYD3-202ENST00000366517 NISCHQ9Y2I1 1504 aa18.78■□□□□ 0.6
SMYD3-202ENST00000366517 ADRA2BP18089 450 aa18.3■□□□□ 0.52
SMYD3-202ENST00000366517 PPP6R1Q9UPN7 881 aa18.25■□□□□ 0.51
SMYD3-202ENST00000366517 PIAS4Q8N2W9 510 aaPredicted RBP18.05■□□□□ 0.48
SMYD3-202ENST00000366517 MSH5O43196 834 aa17.7■□□□□ 0.42
SMYD3-202ENST00000366517 ABCC9O60706 1549 aa17.69■□□□□ 0.42
SMYD3-202ENST00000366517 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
SMYD3-202ENST00000366517 CCDC180Q9P1Z9 1646 aa17.19■□□□□ 0.34
SMYD3-202ENST00000366517 SCAF1Q9H7N4 1312 aaKnown RBP16.86■□□□□ 0.29
SMYD3-202ENST00000366517 PPP4R3CPQ6ZMV5 832 aa16.83■□□□□ 0.28
SMYD3-202ENST00000366517 RB1CC1Q8TDY2 1594 aa16.67■□□□□ 0.26
SMYD3-202ENST00000366517 MAPK8IP2Q13387 824 aaPredicted RBP16.6■□□□□ 0.25
SMYD3-202ENST00000366517 NCBP3Q53F19 620 aaKnown RBP16.46■□□□□ 0.23
SMYD3-202ENST00000366517 DNAJC5Q9H3Z4 198 aa16.45■□□□□ 0.22
SMYD3-202ENST00000366517 NACADO15069 1562 aa16.44■□□□□ 0.22
SMYD3-202ENST00000366517 CNKSR2Q8WXI2 1034 aa16.39■□□□□ 0.21
SMYD3-202ENST00000366517 DMRT2Q9Y5R5 561 aa16.39■□□□□ 0.21
SMYD3-202ENST00000366517 PABPN1Q86U42 306 aaKnown RBP eCLIP16.34■□□□□ 0.21
SMYD3-202ENST00000366517 KCNA4P22459 653 aa16.33■□□□□ 0.2
SMYD3-202ENST00000366517 UNC13AQ9UPW8 1703 aa16.24■□□□□ 0.19
SMYD3-202ENST00000366517 POTEDQ86YR6 584 aa16.21■□□□□ 0.19
SMYD3-202ENST00000366517 BICRAQ9NZM4 1560 aa16.18■□□□□ 0.18
SMYD3-202ENST00000366517 NPM3O75607 178 aaKnown RBP16.11■□□□□ 0.17
SMYD3-202ENST00000366517 MYO15BQ96JP2 1530 aa16.08■□□□□ 0.16
SMYD3-202ENST00000366517 CECR2Q9BXF3 1484 aa16.08■□□□□ 0.16
SMYD3-202ENST00000366517 RNF216Q9NWF9 866 aaPredicted RBP16.08■□□□□ 0.16
SMYD3-202ENST00000366517 SHROOM4Q9ULL8 1493 aa16.05■□□□□ 0.16
SMYD3-202ENST00000366517 CC2D2AQ9P2K1 1620 aa16.01■□□□□ 0.15
SMYD3-202ENST00000366517 HOXD11P31277 338 aaPredicted RBP15.99■□□□□ 0.15
SMYD3-202ENST00000366517 DCAF8L2P0C7V8 631 aa15.97■□□□□ 0.15
SMYD3-202ENST00000366517 DCAF8L1A6NGE4 600 aa15.86■□□□□ 0.13
SMYD3-202ENST00000366517 EIF4G1Q04637 1599 aaKnown RBP15.84■□□□□ 0.13
SMYD3-202ENST00000366517 CUX2O14529 1486 aa15.69■□□□□ 0.1
SMYD3-202ENST00000366517 SLC4A1APQ9BWU0 796 aaKnown RBP15.6■□□□□ 0.09
SMYD3-202ENST00000366517 DCAF1Q9Y4B6 1507 aa15.58■□□□□ 0.09
SMYD3-202ENST00000366517 SCRIBQ14160 1630 aa15.47■□□□□ 0.07
SMYD3-202ENST00000366517 ZCCHC6Q5VYS8 1495 aaKnown RBP15.41■□□□□ 0.06
SMYD3-202ENST00000366517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.39■□□□□ 0.059e-7■□□□□ 8.5
SMYD3-202ENST00000366517 ERCC6Q03468 1493 aa15.36■□□□□ 0.05
SMYD3-202ENST00000366517 TRIM41Q8WV44 630 aa15.25■□□□□ 0.03
SMYD3-202ENST00000366517 NCAPD3P42695 1498 aa15.19■□□□□ 0.02
SMYD3-202ENST00000366517 SLC4A2P04920 1241 aa15.18■□□□□ 0.02
SMYD3-202ENST00000366517 EHMT2Q96KQ7 1210 aa15.1■□□□□ 0.01
SMYD3-202ENST00000366517 RNF39Q9H2S5 420 aa15.1■□□□□ 0.01
SMYD3-202ENST00000366517 FOXD4L1Q9NU39 408 aa15.09■□□□□ 0.01
SMYD3-202ENST00000366517 THOC2Q8NI27 1593 aaKnown RBP15.06■□□□□ 0
SMYD3-202ENST00000366517 NESP48681 1621 aa15□□□□□ -0.01
SMYD3-202ENST00000366517 U3KPZ7 1027 aaPredicted RBP14.99□□□□□ -0.01
SMYD3-202ENST00000366517 HMGXB3Q12766 1538 aa14.99□□□□□ -0.01
SMYD3-202ENST00000366517 ATAD2BQ9ULI0 1458 aa14.98□□□□□ -0.01
SMYD3-202ENST00000366517 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
SMYD3-202ENST00000366517 ZBTB22O15209 634 aa14.95□□□□□ -0.02
SMYD3-202ENST00000366517 SMARCA2P51531 1590 aa14.93□□□□□ -0.02
SMYD3-202ENST00000366517 LAMC3Q9Y6N6 1575 aa14.93□□□□□ -0.02
SMYD3-202ENST00000366517 MYCNP04198 464 aaPredicted RBP14.93□□□□□ -0.02
SMYD3-202ENST00000366517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
SMYD3-202ENST00000366517 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
SMYD3-202ENST00000366517 CACNB1Q02641 598 aaPredicted RBP14.87□□□□□ -0.03
SMYD3-202ENST00000366517 PDS5BQ9NTI5 1447 aa14.86□□□□□ -0.03
SMYD3-202ENST00000366517 CSRNP3Q8WYN3 585 aa14.84□□□□□ -0.03
SMYD3-202ENST00000366517 SAMD1Q6SPF0 538 aaPredicted RBP14.83□□□□□ -0.04
SMYD3-202ENST00000366517 OSCARQ8IYS5 282 aa14.83□□□□□ -0.04
SMYD3-202ENST00000366517 KIF21AQ7Z4S6 1674 aa14.82□□□□□ -0.04
SMYD3-202ENST00000366517 APLP2Q06481 763 aa14.81□□□□□ -0.04
SMYD3-202ENST00000366517 BAZ1AQ9NRL2 1556 aaPredicted RBP14.79□□□□□ -0.04
SMYD3-202ENST00000366517 SMARCA4P51532 1647 aa14.76□□□□□ -0.05
SMYD3-202ENST00000366517 BAZ1BQ9UIG0 1483 aaKnown RBP14.76□□□□□ -0.05
SMYD3-202ENST00000366517 WDR62O43379 1518 aa14.74□□□□□ -0.05
SMYD3-202ENST00000366517 PEG3Q9GZU2 1588 aa14.73□□□□□ -0.05
SMYD3-202ENST00000366517 MRC2Q9UBG0 1479 aa14.72□□□□□ -0.05
SMYD3-202ENST00000366517 CAPN15O75808 1086 aa14.68□□□□□ -0.06
SMYD3-202ENST00000366517 CADPSQ9ULU8 1353 aa14.65□□□□□ -0.06
SMYD3-202ENST00000366517 RIMBP3CA6NJZ7 1639 aa14.64□□□□□ -0.07
SMYD3-202ENST00000366517 RIMBP3BA6NNM3 1639 aa14.64□□□□□ -0.07
SMYD3-202ENST00000366517 RIMBP3Q9UFD9 1639 aa14.64□□□□□ -0.07
SMYD3-202ENST00000366517 SPINK5Q9NQ38 1064 aaPredicted RBP14.62□□□□□ -0.07
SMYD3-202ENST00000366517 TRHP20396 242 aaPredicted RBP14.59□□□□□ -0.07
SMYD3-202ENST00000366517 ATXN8OSP0DMR3 200 aa14.56□□□□□ -0.08
SMYD3-202ENST00000366517 ZNF219Q9P2Y4 722 aaPredicted RBP14.55□□□□□ -0.08
SMYD3-202ENST00000366517 ARHGEF11O15085 1522 aa14.54□□□□□ -0.08
SMYD3-202ENST00000366517 CEP164Q9UPV0 1460 aa14.52□□□□□ -0.09
SMYD3-202ENST00000366517 ATF5Q9Y2D1 282 aaPredicted RBP14.45□□□□□ -0.1
SMYD3-202ENST00000366517 CYB5RLQ6IPT4 315 aa14.44□□□□□ -0.1
SMYD3-202ENST00000366517 FANCD2Q9BXW9 1451 aa14.44□□□□□ -0.1
SMYD3-202ENST00000366517 MROH2BQ7Z745 1585 aa14.39□□□□□ -0.11
SMYD3-202ENST00000366517 CFTRP13569 1480 aa14.36□□□□□ -0.11
SMYD3-202ENST00000366517 ABCB7O75027 752 aa14.34□□□□□ -0.11
SMYD3-202ENST00000366517 DSG3P32926 999 aa14.34□□□□□ -0.11
SMYD3-202ENST00000366517 URB2Q14146 1524 aaKnown RBP14.34□□□□□ -0.11
SMYD3-202ENST00000366517 ARAP1Q96P48 1450 aa14.33□□□□□ -0.12
SMYD3-202ENST00000366517 RSF1Q96T23 1441 aaPredicted RBP14.31□□□□□ -0.12
SMYD3-202ENST00000366517 IFT140Q96RY7 1462 aa14.29□□□□□ -0.12
SMYD3-202ENST00000366517 POLA2Q14181 598 aa14.29□□□□□ -0.12
SMYD3-202ENST00000366517 ZNF608Q9ULD9 1512 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms