RNA–Protein interactions for RNA: ENST00000426398.2

PTBP2-203, Transcript of polypyrimidine tract binding protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP2, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP2-203ENST00000426398 NISCHQ9Y2I1 1504 aa16.76■□□□□ 0.27
PTBP2-203ENST00000426398 CCDC180Q9P1Z9 1646 aa14.42□□□□□ -0.1
PTBP2-203ENST00000426398 ZCCHC6Q5VYS8 1495 aaKnown RBP14.09□□□□□ -0.15
PTBP2-203ENST00000426398 DCAF8L2P0C7V8 631 aa13.99□□□□□ -0.17
PTBP2-203ENST00000426398 PELP1Q8IZL8 1130 aaKnown RBP13.99□□□□□ -0.17
PTBP2-203ENST00000426398 SHROOM4Q9ULL8 1493 aa13.97□□□□□ -0.17
PTBP2-203ENST00000426398 DCAF1Q9Y4B6 1507 aa13.78□□□□□ -0.2
PTBP2-203ENST00000426398 MYT1Q01538 1121 aa13.72□□□□□ -0.21
PTBP2-203ENST00000426398 ABCC9O60706 1549 aa13.66□□□□□ -0.22
PTBP2-203ENST00000426398 SUPT5HO00267 1087 aaKnown RBP13.54□□□□□ -0.24
PTBP2-203ENST00000426398 MYO15BQ96JP2 1530 aa13.53□□□□□ -0.24
PTBP2-203ENST00000426398 NACADO15069 1562 aa13.44□□□□□ -0.26
PTBP2-203ENST00000426398 SCRIBQ14160 1630 aa13.42□□□□□ -0.26
PTBP2-203ENST00000426398 HRCP23327 699 aa13.37□□□□□ -0.27
PTBP2-203ENST00000426398 RB1CC1Q8TDY2 1594 aa13.3□□□□□ -0.28
PTBP2-203ENST00000426398 TTBK1Q5TCY1 1321 aaPredicted RBP13.2□□□□□ -0.3
PTBP2-203ENST00000426398 RSF1Q96T23 1441 aaPredicted RBP13.11□□□□□ -0.31
PTBP2-203ENST00000426398 CECR2Q9BXF3 1484 aa13.07□□□□□ -0.32
PTBP2-203ENST00000426398 UNC13AQ9UPW8 1703 aa13.02□□□□□ -0.33
PTBP2-203ENST00000426398 CHIC1Q5VXU3 224 aa12.99□□□□□ -0.33
PTBP2-203ENST00000426398 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
PTBP2-203ENST00000426398 MROH2BQ7Z745 1585 aa12.99□□□□□ -0.33
PTBP2-203ENST00000426398 BICRAQ9NZM4 1560 aa12.91□□□□□ -0.34
PTBP2-203ENST00000426398 BAZ1AQ9NRL2 1556 aaPredicted RBP12.9□□□□□ -0.34
PTBP2-203ENST00000426398 SCAF1Q9H7N4 1312 aaKnown RBP12.89□□□□□ -0.35
PTBP2-203ENST00000426398 WIZO95785 1651 aa12.88□□□□□ -0.35
PTBP2-203ENST00000426398 SMARCA4P51532 1647 aa12.82□□□□□ -0.36
PTBP2-203ENST00000426398 PPARGC1BQ86YN6 1023 aaKnown RBP12.72□□□□□ -0.37
PTBP2-203ENST00000426398 TOP2AP11388 1531 aaKnown RBP12.7□□□□□ -0.38
PTBP2-203ENST00000426398 TRIM41Q8WV44 630 aa12.67□□□□□ -0.38
PTBP2-203ENST00000426398 CCDC88BA6NC98 1476 aa12.64□□□□□ -0.39
PTBP2-203ENST00000426398 PEG3Q9GZU2 1588 aa12.61□□□□□ -0.39
PTBP2-203ENST00000426398 SMARCA2P51531 1590 aa12.61□□□□□ -0.39
PTBP2-203ENST00000426398 ATAD2BQ9ULI0 1458 aa12.6□□□□□ -0.39
PTBP2-203ENST00000426398 LOC105371045A0A1W2PR82 267 aa12.57□□□□□ -0.4
PTBP2-203ENST00000426398 BAZ1BQ9UIG0 1483 aaKnown RBP12.55□□□□□ -0.4
PTBP2-203ENST00000426398 EIF4G1Q04637 1599 aaKnown RBP12.54□□□□□ -0.4
PTBP2-203ENST00000426398 FAM9AQ8IZU1 332 aaPredicted RBP12.52□□□□□ -0.41
PTBP2-203ENST00000426398 PCGF6Q9BYE7 350 aa12.48□□□□□ -0.41
PTBP2-203ENST00000426398 PRKCSHP14314 528 aaPredicted RBP12.47□□□□□ -0.41
PTBP2-203ENST00000426398 ABCC8Q09428 1581 aa12.45□□□□□ -0.42
PTBP2-203ENST00000426398 ACIN1Q9UKV3 1341 aaKnown RBP12.44□□□□□ -0.42
PTBP2-203ENST00000426398 NCAPD3P42695 1498 aa12.44□□□□□ -0.42
PTBP2-203ENST00000426398 BCL11AQ9H165 835 aa12.43□□□□□ -0.42
PTBP2-203ENST00000426398 ZEB1P37275 1124 aaPredicted RBP12.42□□□□□ -0.42
PTBP2-203ENST00000426398 HMGXB3Q12766 1538 aa12.4□□□□□ -0.42
PTBP2-203ENST00000426398 EHMT2Q96KQ7 1210 aa12.4□□□□□ -0.43
PTBP2-203ENST00000426398 APLP2Q06481 763 aa12.36□□□□□ -0.43
PTBP2-203ENST00000426398 WRNQ14191 1432 aaPredicted RBP eCLIP12.34□□□□□ -0.43
PTBP2-203ENST00000426398 ERICH6Q7L0X2 663 aa12.32□□□□□ -0.44
PTBP2-203ENST00000426398 CENPBP07199 599 aaPredicted RBP12.3□□□□□ -0.44
PTBP2-203ENST00000426398 CC2D2AQ9P2K1 1620 aa12.3□□□□□ -0.44
PTBP2-203ENST00000426398 SOGA1O94964 1423 aa12.28□□□□□ -0.44
PTBP2-203ENST00000426398 NEUROD1Q13562 356 aa12.27□□□□□ -0.45
PTBP2-203ENST00000426398 SYNJ1O43426 1573 aa12.25□□□□□ -0.45
PTBP2-203ENST00000426398 DNAJC5BQ9UF47 199 aa12.23□□□□□ -0.45
PTBP2-203ENST00000426398 RUSC2Q8N2Y8 1516 aa12.23□□□□□ -0.45
PTBP2-203ENST00000426398 CFTRP13569 1480 aa12.23□□□□□ -0.45
PTBP2-203ENST00000426398 CSRNP3Q8WYN3 585 aa12.21□□□□□ -0.45
PTBP2-203ENST00000426398 GTF3C3Q9Y5Q9 886 aa12.21□□□□□ -0.45
PTBP2-203ENST00000426398 EEA1Q15075 1411 aa12.2□□□□□ -0.46
PTBP2-203ENST00000426398 TRIM26Q12899 539 aaPredicted RBP12.19□□□□□ -0.46
PTBP2-203ENST00000426398 CADPSQ9ULU8 1353 aa12.17□□□□□ -0.46
PTBP2-203ENST00000426398 TOP2BQ02880 1626 aa12.16□□□□□ -0.46
PTBP2-203ENST00000426398 UBTFP17480 764 aaKnown RBP12.13□□□□□ -0.47
PTBP2-203ENST00000426398 CUX1P39880 1505 aa12.12□□□□□ -0.47
PTBP2-203ENST00000426398 BIVM-ERCC5R4GMW8 1640 aa12.11□□□□□ -0.47
PTBP2-203ENST00000426398 ANP32EQ9BTT0 268 aa12.1□□□□□ -0.47
PTBP2-203ENST00000426398 TNIKQ9UKE5 1360 aa12.08□□□□□ -0.47
PTBP2-203ENST00000426398 GOLGA3Q08378 1498 aa12.07□□□□□ -0.48
PTBP2-203ENST00000426398 PRDM2Q13029 1718 aa12.06□□□□□ -0.48
PTBP2-203ENST00000426398 CEP162Q5TB80 1403 aa12.05□□□□□ -0.48
PTBP2-203ENST00000426398 CEP164Q9UPV0 1460 aa12.05□□□□□ -0.48
PTBP2-203ENST00000426398 NESP48681 1621 aa12.05□□□□□ -0.48
PTBP2-203ENST00000426398 FANCD2Q9BXW9 1451 aa12.04□□□□□ -0.48
PTBP2-203ENST00000426398 KIF21BO75037 1637 aa12.01□□□□□ -0.49
PTBP2-203ENST00000426398 RAPGEF2Q9Y4G8 1499 aa12□□□□□ -0.49
PTBP2-203ENST00000426398 KIF27Q86VH2 1401 aa12□□□□□ -0.49
PTBP2-203ENST00000426398 FGD5Q6ZNL6 1462 aa11.97□□□□□ -0.49
PTBP2-203ENST00000426398 LAMC3Q9Y6N6 1575 aa11.96□□□□□ -0.49
PTBP2-203ENST00000426398 RANGAP1P46060 587 aaPredicted RBP11.95□□□□□ -0.5
PTBP2-203ENST00000426398 CUX2O14529 1486 aa11.95□□□□□ -0.5
PTBP2-203ENST00000426398 PRXQ9BXM0 1461 aa11.95□□□□□ -0.5
PTBP2-203ENST00000426398 CLIP1P30622 1438 aa11.92□□□□□ -0.5
PTBP2-203ENST00000426398 PDS5BQ9NTI5 1447 aa11.92□□□□□ -0.5
PTBP2-203ENST00000426398 TOPBP1Q92547 1522 aa11.91□□□□□ -0.5
PTBP2-203ENST00000426398 DNMBPQ6XZF7 1577 aa11.91□□□□□ -0.5
PTBP2-203ENST00000426398 ERICH3Q5RHP9 1530 aa11.9□□□□□ -0.5
PTBP2-203ENST00000426398 IGF1RP08069 1367 aa11.9□□□□□ -0.5
PTBP2-203ENST00000426398 RAD54L2Q9Y4B4 1467 aa11.89□□□□□ -0.51
PTBP2-203ENST00000426398 CLSPNQ9HAW4 1339 aa11.89□□□□□ -0.51
PTBP2-203ENST00000426398 POLA1P09884 1462 aaPredicted RBP11.88□□□□□ -0.51
PTBP2-203ENST00000426398 URB2Q14146 1524 aaKnown RBP11.87□□□□□ -0.51
PTBP2-203ENST00000426398 CARMIL1Q5VZK9 1371 aa11.85□□□□□ -0.51
PTBP2-203ENST00000426398 ABCA10Q8WWZ4 1543 aa11.83□□□□□ -0.52
PTBP2-203ENST00000426398 KIF21AQ7Z4S6 1674 aa11.82□□□□□ -0.52
PTBP2-203ENST00000426398 VPS8Q8N3P4 1428 aa11.82□□□□□ -0.52
PTBP2-203ENST00000426398 TDRD9Q8NDG6 1382 aaKnown RBP11.78□□□□□ -0.52
PTBP2-203ENST00000426398 DIEXFQ68CQ4 756 aaKnown RBP11.78□□□□□ -0.52
PTBP2-203ENST00000426398 ARAP1Q96P48 1450 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms