RNA–Protein interactions for RNA: ENST00000475501.1

LRP8-208, Transcript of LDL receptor related protein 8, humanhuman

TSL 3

Gene LRP8, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-208ENST00000475501 NISCHQ9Y2I1 1504 aa22.5■■□□□ 1.19
LRP8-208ENST00000475501 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.84
LRP8-208ENST00000475501 ABCC9O60706 1549 aa20■□□□□ 0.79
LRP8-208ENST00000475501 RB1CC1Q8TDY2 1594 aa19.22■□□□□ 0.67
LRP8-208ENST00000475501 NACADO15069 1562 aa19.13■□□□□ 0.65
LRP8-208ENST00000475501 MYO15BQ96JP2 1530 aa18.97■□□□□ 0.63
LRP8-208ENST00000475501 DCAF8L2P0C7V8 631 aa18.78■□□□□ 0.6
LRP8-208ENST00000475501 UNC13AQ9UPW8 1703 aa18.77■□□□□ 0.59
LRP8-208ENST00000475501 DCAF1Q9Y4B6 1507 aa18.71■□□□□ 0.59
LRP8-208ENST00000475501 DNAJC5BQ9UF47 199 aa18.67■□□□□ 0.58
LRP8-208ENST00000475501 ZCCHC6Q5VYS8 1495 aaKnown RBP18.66■□□□□ 0.58
LRP8-208ENST00000475501 BICRAQ9NZM4 1560 aa18.59■□□□□ 0.57
LRP8-208ENST00000475501 PABPN1Q86U42 306 aaKnown RBP eCLIP18.57■□□□□ 0.56
LRP8-208ENST00000475501 SHROOM4Q9ULL8 1493 aa18.53■□□□□ 0.56
LRP8-208ENST00000475501 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
LRP8-208ENST00000475501 CC2D2AQ9P2K1 1620 aa18.16■□□□□ 0.5
LRP8-208ENST00000475501 EIF4G1Q04637 1599 aaKnown RBP18.14■□□□□ 0.49
LRP8-208ENST00000475501 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
LRP8-208ENST00000475501 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
LRP8-208ENST00000475501 SMARCA2P51531 1590 aa17.55■□□□□ 0.4
LRP8-208ENST00000475501 SMARCA4P51532 1647 aa17.54■□□□□ 0.4
LRP8-208ENST00000475501 ATAD2BQ9ULI0 1458 aa17.53■□□□□ 0.4
LRP8-208ENST00000475501 HMGXB3Q12766 1538 aa17.52■□□□□ 0.4
LRP8-208ENST00000475501 BAZ1AQ9NRL2 1556 aaPredicted RBP17.5■□□□□ 0.39
LRP8-208ENST00000475501 PEG3Q9GZU2 1588 aa17.45■□□□□ 0.38
LRP8-208ENST00000475501 CUX2O14529 1486 aa17.37■□□□□ 0.37
LRP8-208ENST00000475501 BAZ1BQ9UIG0 1483 aaKnown RBP17.36■□□□□ 0.37
LRP8-208ENST00000475501 ERCC6Q03468 1493 aa17.32■□□□□ 0.36
LRP8-208ENST00000475501 MROH2BQ7Z745 1585 aa17.27■□□□□ 0.35
LRP8-208ENST00000475501 LAMC3Q9Y6N6 1575 aa17.24■□□□□ 0.35
LRP8-208ENST00000475501 DNAJC5Q9H3Z4 198 aa17.23■□□□□ 0.35
LRP8-208ENST00000475501 NESP48681 1621 aa17.18■□□□□ 0.34
LRP8-208ENST00000475501 PDS5BQ9NTI5 1447 aa17.12■□□□□ 0.33
LRP8-208ENST00000475501 THOC2Q8NI27 1593 aaKnown RBP17.11■□□□□ 0.33
LRP8-208ENST00000475501 WIZO95785 1651 aa17.07■□□□□ 0.32
LRP8-208ENST00000475501 CADPSQ9ULU8 1353 aa17.06■□□□□ 0.32
LRP8-208ENST00000475501 KIF21AQ7Z4S6 1674 aa17.05■□□□□ 0.32
LRP8-208ENST00000475501 RSF1Q96T23 1441 aaPredicted RBP16.95■□□□□ 0.3
LRP8-208ENST00000475501 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
LRP8-208ENST00000475501 TOP2AP11388 1531 aaKnown RBP16.92■□□□□ 0.3
LRP8-208ENST00000475501 WDR62O43379 1518 aa16.91■□□□□ 0.3
LRP8-208ENST00000475501 CFTRP13569 1480 aa16.89■□□□□ 0.29
LRP8-208ENST00000475501 CEP164Q9UPV0 1460 aa16.87■□□□□ 0.29
LRP8-208ENST00000475501 FANCD2Q9BXW9 1451 aa16.84■□□□□ 0.29
LRP8-208ENST00000475501 PRDM2Q13029 1718 aa16.82■□□□□ 0.28
LRP8-208ENST00000475501 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
LRP8-208ENST00000475501 URB2Q14146 1524 aaKnown RBP16.67■□□□□ 0.26
LRP8-208ENST00000475501 ABCC8Q09428 1581 aa16.62■□□□□ 0.25
LRP8-208ENST00000475501 IFT140Q96RY7 1462 aa16.56■□□□□ 0.24
LRP8-208ENST00000475501 OSCARQ8IYS5 282 aa16.53■□□□□ 0.24
LRP8-208ENST00000475501 TOPBP1Q92547 1522 aa16.53■□□□□ 0.24
LRP8-208ENST00000475501 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
LRP8-208ENST00000475501 ZNF608Q9ULD9 1512 aaPredicted RBP16.42■□□□□ 0.22
LRP8-208ENST00000475501 TARBP1Q13395 1621 aaKnown RBP16.4■□□□□ 0.22
LRP8-208ENST00000475501 EIF4G3O43432 1585 aaKnown RBP16.39■□□□□ 0.21
LRP8-208ENST00000475501 WDR97A6NE52 1622 aa16.38■□□□□ 0.21
LRP8-208ENST00000475501 POLA1P09884 1462 aaPredicted RBP16.35■□□□□ 0.21
LRP8-208ENST00000475501 TRIM41Q8WV44 630 aa16.35■□□□□ 0.21
LRP8-208ENST00000475501 RIMBP3CA6NJZ7 1639 aa16.29■□□□□ 0.2
LRP8-208ENST00000475501 RIMBP3BA6NNM3 1639 aa16.29■□□□□ 0.2
LRP8-208ENST00000475501 RIMBP3Q9UFD9 1639 aa16.29■□□□□ 0.2
LRP8-208ENST00000475501 SOGA1O94964 1423 aa16.28■□□□□ 0.2
LRP8-208ENST00000475501 AQRO60306 1485 aaKnown RBP eCLIP16.28■□□□□ 0.29e-7■□□□□ 11.1
LRP8-208ENST00000475501 CHD1O14646 1710 aa16.28■□□□□ 0.2
LRP8-208ENST00000475501 ARHGEF11O15085 1522 aa16.24■□□□□ 0.19
LRP8-208ENST00000475501 FGD5Q6ZNL6 1462 aa16.24■□□□□ 0.19
LRP8-208ENST00000475501 CUX1P39880 1505 aa16.23■□□□□ 0.19
LRP8-208ENST00000475501 RAD54L2Q9Y4B4 1467 aa16.22■□□□□ 0.19
LRP8-208ENST00000475501 MAGI1Q96QZ7 1491 aaPredicted RBP16.2■□□□□ 0.18
LRP8-208ENST00000475501 GRIN2BQ13224 1484 aa16.17■□□□□ 0.18
LRP8-208ENST00000475501 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
LRP8-208ENST00000475501 SNAPC4Q5SXM2 1469 aa16.14■□□□□ 0.17
LRP8-208ENST00000475501 SYNJ1O43426 1573 aa16.13■□□□□ 0.17
LRP8-208ENST00000475501 ABCA10Q8WWZ4 1543 aa16.13■□□□□ 0.17
LRP8-208ENST00000475501 FBLN2P98095 1184 aa16.12■□□□□ 0.17
LRP8-208ENST00000475501 PBRM1Q86U86 1689 aa16.11■□□□□ 0.17
LRP8-208ENST00000475501 SYNJ2O15056 1496 aa16.11■□□□□ 0.17
LRP8-208ENST00000475501 SUPT5HO00267 1087 aaKnown RBP16.11■□□□□ 0.17
LRP8-208ENST00000475501 CLASP1Q7Z460 1538 aa16.1■□□□□ 0.17
LRP8-208ENST00000475501 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
LRP8-208ENST00000475501 ABCA5Q8WWZ7 1642 aa16.09■□□□□ 0.17
LRP8-208ENST00000475501 CHMP7Q8WUX9 453 aaPredicted RBP16.09■□□□□ 0.17
LRP8-208ENST00000475501 BIVM-ERCC5R4GMW8 1640 aa16.08■□□□□ 0.16
LRP8-208ENST00000475501 TOP2BQ02880 1626 aa16.06■□□□□ 0.16
LRP8-208ENST00000475501 ARAP1Q96P48 1450 aa16.06■□□□□ 0.16
LRP8-208ENST00000475501 WRNQ14191 1432 aaPredicted RBP eCLIP16.06■□□□□ 0.16
LRP8-208ENST00000475501 CYB5RLQ6IPT4 315 aa16.05■□□□□ 0.16
LRP8-208ENST00000475501 ERICH3Q5RHP9 1530 aa15.96■□□□□ 0.15
LRP8-208ENST00000475501 GRIN2AQ12879 1464 aa15.94■□□□□ 0.14
LRP8-208ENST00000475501 ADAMTS12P58397 1594 aa15.94■□□□□ 0.14
LRP8-208ENST00000475501 FHAD1B1AJZ9 1412 aa15.93■□□□□ 0.14
LRP8-208ENST00000475501 NUP160Q12769 1436 aa15.91■□□□□ 0.14
LRP8-208ENST00000475501 SHROOM2Q13796 1616 aa15.86■□□□□ 0.13
LRP8-208ENST00000475501 CEP170Q5SW79 1584 aa15.85■□□□□ 0.13
LRP8-208ENST00000475501 TRHP20396 242 aaPredicted RBP15.84■□□□□ 0.13
LRP8-208ENST00000475501 CUL7Q14999 1698 aa15.75■□□□□ 0.11
LRP8-208ENST00000475501 ERCC6L2Q5T890 1561 aa15.75■□□□□ 0.11
LRP8-208ENST00000475501 KIF27Q86VH2 1401 aa15.73■□□□□ 0.11
LRP8-208ENST00000475501 RUSC2Q8N2Y8 1516 aa15.72■□□□□ 0.11
LRP8-208ENST00000475501 JPH4Q96JJ6 628 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms