RNA–Protein interactions for RNA: ENST00000470510.5

SMYD3-209, Transcript of SET and MYND domain containing 3, humanhuman

TSL 5

Gene SMYD3, Length 1,042 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-209ENST00000470510 CHIC1Q5VXU3 224 aa23.15■■□□□ 1.3
SMYD3-209ENST00000470510 AEBP2Q6ZN18 517 aaPredicted RBP22.89■■□□□ 1.25
SMYD3-209ENST00000470510 PHF23Q9BUL5 403 aaPredicted RBP20.37■□□□□ 0.85
SMYD3-209ENST00000470510 SENP3Q9H4L4 574 aaPredicted RBP19.43■□□□□ 0.7
SMYD3-209ENST00000470510 PLPPR3Q6T4P5 718 aa19.21■□□□□ 0.67
SMYD3-209ENST00000470510 ADRA2BP18089 450 aa17.87■□□□□ 0.45
SMYD3-209ENST00000470510 FOXD1Q16676 465 aa17.86■□□□□ 0.45
SMYD3-209ENST00000470510 PPP6R1Q9UPN7 881 aa17.73■□□□□ 0.43
SMYD3-209ENST00000470510 KCNA4P22459 653 aa17.43■□□□□ 0.38
SMYD3-209ENST00000470510 EHMT2Q96KQ7 1210 aa17.22■□□□□ 0.35
SMYD3-209ENST00000470510 PIAS4Q8N2W9 510 aaPredicted RBP17.13■□□□□ 0.33
SMYD3-209ENST00000470510 PPP4R3CPQ6ZMV5 832 aa16.99■□□□□ 0.31
SMYD3-209ENST00000470510 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
SMYD3-209ENST00000470510 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
SMYD3-209ENST00000470510 CSRNP3Q8WYN3 585 aa16.55■□□□□ 0.24
SMYD3-209ENST00000470510 NPM3O75607 178 aaKnown RBP16.5■□□□□ 0.23
SMYD3-209ENST00000470510 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
SMYD3-209ENST00000470510 CNKSR2Q8WXI2 1034 aa16.36■□□□□ 0.21
SMYD3-209ENST00000470510 MSH5O43196 834 aa16.27■□□□□ 0.2
SMYD3-209ENST00000470510 NISCHQ9Y2I1 1504 aa16.01■□□□□ 0.15
SMYD3-209ENST00000470510 ZBTB22O15209 634 aa16■□□□□ 0.15
SMYD3-209ENST00000470510 MAPK8IP2Q13387 824 aaPredicted RBP15.92■□□□□ 0.14
SMYD3-209ENST00000470510 FOXD4L1Q9NU39 408 aa15.87■□□□□ 0.13
SMYD3-209ENST00000470510 RNF216Q9NWF9 866 aaPredicted RBP15.84■□□□□ 0.13
SMYD3-209ENST00000470510 DNAJC5BQ9UF47 199 aa15.83■□□□□ 0.12
SMYD3-209ENST00000470510 DMRT2Q9Y5R5 561 aa15.58■□□□□ 0.08
SMYD3-209ENST00000470510 HOXD11P31277 338 aaPredicted RBP15.53■□□□□ 0.08
SMYD3-209ENST00000470510 SLC4A2P04920 1241 aa15.34■□□□□ 0.05
SMYD3-209ENST00000470510 MYCNP04198 464 aaPredicted RBP15.29■□□□□ 0.04
SMYD3-209ENST00000470510 ATXN8OSP0DMR3 200 aa15.24■□□□□ 0.03
SMYD3-209ENST00000470510 AMER1Q5JTC6 1135 aaPredicted RBP15.04■□□□□ -0
SMYD3-209ENST00000470510 DCAF8L1A6NGE4 600 aa15.02■□□□□ -0
SMYD3-209ENST00000470510 FKBP8Q14318 412 aa15.01□□□□□ -0.01
SMYD3-209ENST00000470510 RTN4Q9NQC3 1192 aaKnown RBP14.95□□□□□ -0.02
SMYD3-209ENST00000470510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.93□□□□□ -0.029e-7■□□□□ 8.5
SMYD3-209ENST00000470510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.86□□□□□ -0.03
SMYD3-209ENST00000470510 HNRNPUL2Q1KMD3 747 aaKnown RBP14.86□□□□□ -0.03
SMYD3-209ENST00000470510 SAMD1Q6SPF0 538 aaPredicted RBP14.82□□□□□ -0.04
SMYD3-209ENST00000470510 SLC24A1O60721 1099 aa14.81□□□□□ -0.04
SMYD3-209ENST00000470510 ATF5Q9Y2D1 282 aaPredicted RBP14.72□□□□□ -0.05
SMYD3-209ENST00000470510 U3KPZ7 1027 aaPredicted RBP14.66□□□□□ -0.06
SMYD3-209ENST00000470510 APLP2Q06481 763 aa14.57□□□□□ -0.08
SMYD3-209ENST00000470510 POTEDQ86YR6 584 aa14.52□□□□□ -0.09
SMYD3-209ENST00000470510 ZNF219Q9P2Y4 722 aaPredicted RBP14.48□□□□□ -0.09
SMYD3-209ENST00000470510 FBXO3Q9UK99 471 aa14.33□□□□□ -0.12
SMYD3-209ENST00000470510 SPDYE4A6NLX3 237 aa14.27□□□□□ -0.13
SMYD3-209ENST00000470510 FBLN2P98095 1184 aa14.22□□□□□ -0.13
SMYD3-209ENST00000470510 TRHP20396 242 aaPredicted RBP14.16□□□□□ -0.14
SMYD3-209ENST00000470510 MKRN4PQ13434 485 aaPredicted RBP14.12□□□□□ -0.15
SMYD3-209ENST00000470510 CAPN15O75808 1086 aa14.05□□□□□ -0.16
SMYD3-209ENST00000470510 VASPP50552 380 aaPredicted RBP14.05□□□□□ -0.16
SMYD3-209ENST00000470510 POLA2Q14181 598 aa14.05□□□□□ -0.16
SMYD3-209ENST00000470510 SPINK5Q9NQ38 1064 aaPredicted RBP14.04□□□□□ -0.16
SMYD3-209ENST00000470510 PROM2Q8N271 834 aa14.03□□□□□ -0.16
SMYD3-209ENST00000470510 CCDC180Q9P1Z9 1646 aa13.97□□□□□ -0.17
SMYD3-209ENST00000470510 RNF39Q9H2S5 420 aa13.95□□□□□ -0.18
SMYD3-209ENST00000470510 ZBTB12Q9Y330 459 aaPredicted RBP13.95□□□□□ -0.18
SMYD3-209ENST00000470510 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
SMYD3-209ENST00000470510 C1QBPQ07021 282 aaKnown RBP13.87□□□□□ -0.19
SMYD3-209ENST00000470510 IFNLR1Q8IU57 520 aaPredicted RBP13.86□□□□□ -0.19
SMYD3-209ENST00000470510 ABCB7O75027 752 aa13.82□□□□□ -0.2
SMYD3-209ENST00000470510 PLCB2Q00722 1185 aa13.82□□□□□ -0.2
SMYD3-209ENST00000470510 KLHL34Q8N239 644 aa13.72□□□□□ -0.21
SMYD3-209ENST00000470510 HAP1P54257 671 aaPredicted RBP13.71□□□□□ -0.21
SMYD3-209ENST00000470510 PKD2Q13563 968 aa13.67□□□□□ -0.22
SMYD3-209ENST00000470510 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
SMYD3-209ENST00000470510 SPOCK2Q92563 424 aa13.64□□□□□ -0.23
SMYD3-209ENST00000470510 STAG3Q9UJ98 1225 aa13.63□□□□□ -0.23
SMYD3-209ENST00000470510 PLCD3Q8N3E9 789 aa13.6□□□□□ -0.23
SMYD3-209ENST00000470510 SPDYE2BA6NHP3 402 aa13.58□□□□□ -0.24
SMYD3-209ENST00000470510 SPDYE6P0CI01 402 aa13.58□□□□□ -0.24
SMYD3-209ENST00000470510 SPDYE2Q495Y8 402 aa13.58□□□□□ -0.24
SMYD3-209ENST00000470510 ECM2O94769 699 aaPredicted RBP13.56□□□□□ -0.24
SMYD3-209ENST00000470510 OSCARQ8IYS5 282 aa13.55□□□□□ -0.24
SMYD3-209ENST00000470510 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.54□□□□□ -0.24
SMYD3-209ENST00000470510 DSG3P32926 999 aa13.53□□□□□ -0.24
SMYD3-209ENST00000470510 ZCCHC6Q5VYS8 1495 aaKnown RBP13.49□□□□□ -0.25
SMYD3-209ENST00000470510 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMYD3-209ENST00000470510 MIER1Q8N108 512 aa13.49□□□□□ -0.25
SMYD3-209ENST00000470510 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
SMYD3-209ENST00000470510 PLEKHG5O94827 1062 aa13.47□□□□□ -0.25
SMYD3-209ENST00000470510 VSIG10Q8N0Z9 540 aa13.45□□□□□ -0.26
SMYD3-209ENST00000470510 BBXQ8WY36 941 aaPredicted RBP13.45□□□□□ -0.26
SMYD3-209ENST00000470510 BCANQ96GW7 911 aa13.44□□□□□ -0.26
SMYD3-209ENST00000470510 ZBTB47Q9UFB7 747 aaPredicted RBP13.41□□□□□ -0.26
SMYD3-209ENST00000470510 PAXIP1Q6ZW49 1069 aaPredicted RBP13.38□□□□□ -0.27
SMYD3-209ENST00000470510 CFAP44Q96MT7 982 aa13.37□□□□□ -0.27
SMYD3-209ENST00000470510 CIZ1Q9ULV3 898 aaPredicted RBP13.35□□□□□ -0.27
SMYD3-209ENST00000470510 RGL2O15211 777 aa13.33□□□□□ -0.28
SMYD3-209ENST00000470510 DCAF1Q9Y4B6 1507 aa13.32□□□□□ -0.28
SMYD3-209ENST00000470510 NPM1P06748 294 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMYD3-209ENST00000470510 SPRYD3Q8NCJ5 442 aa13.26□□□□□ -0.29
SMYD3-209ENST00000470510 CHGAP10645 457 aaKnown RBP13.23□□□□□ -0.29
SMYD3-209ENST00000470510 TRIM41Q8WV44 630 aa13.23□□□□□ -0.29
SMYD3-209ENST00000470510 TAOK2Q9UL54 1235 aa13.17□□□□□ -0.3
SMYD3-209ENST00000470510 KDM2AQ9Y2K7 1162 aa13.17□□□□□ -0.3
SMYD3-209ENST00000470510 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
SMYD3-209ENST00000470510 CACNB1Q02641 598 aaPredicted RBP13.13□□□□□ -0.31
SMYD3-209ENST00000470510 GSE1Q14687 1217 aa13.13□□□□□ -0.31
SMYD3-209ENST00000470510 PRKCSHP14314 528 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms