RNA–Protein interactions for RNA: ENST00000521214.5

SPIDR-213, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-213ENST00000521214 NISCHQ9Y2I1 1504 aa16.74■□□□□ 0.27
SPIDR-213ENST00000521214 DCAF8L2P0C7V8 631 aa15.05■□□□□ -0
SPIDR-213ENST00000521214 SHROOM4Q9ULL8 1493 aa14.7□□□□□ -0.06
SPIDR-213ENST00000521214 ABCC9O60706 1549 aa14.31□□□□□ -0.12
SPIDR-213ENST00000521214 SUPT5HO00267 1087 aaKnown RBP14.21□□□□□ -0.14
SPIDR-213ENST00000521214 CCDC180Q9P1Z9 1646 aa14.15□□□□□ -0.15
SPIDR-213ENST00000521214 ZCCHC6Q5VYS8 1495 aaKnown RBP13.97□□□□□ -0.17
SPIDR-213ENST00000521214 PABPN1Q86U42 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
SPIDR-213ENST00000521214 SCRIBQ14160 1630 aa13.73□□□□□ -0.21
SPIDR-213ENST00000521214 EHMT2Q96KQ7 1210 aa13.48□□□□□ -0.25
SPIDR-213ENST00000521214 DCAF1Q9Y4B6 1507 aa13.37□□□□□ -0.27
SPIDR-213ENST00000521214 RB1CC1Q8TDY2 1594 aa13.37□□□□□ -0.27
SPIDR-213ENST00000521214 NACADO15069 1562 aa13.36□□□□□ -0.27
SPIDR-213ENST00000521214 CECR2Q9BXF3 1484 aa13.35□□□□□ -0.27
SPIDR-213ENST00000521214 PELP1Q8IZL8 1130 aaKnown RBP13.31□□□□□ -0.28
SPIDR-213ENST00000521214 FAM9AQ8IZU1 332 aaPredicted RBP13.28□□□□□ -0.28
SPIDR-213ENST00000521214 RSF1Q96T23 1441 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-213ENST00000521214 CHIC1Q5VXU3 224 aa13.16□□□□□ -0.3
SPIDR-213ENST00000521214 MYO15BQ96JP2 1530 aa13.15□□□□□ -0.3
SPIDR-213ENST00000521214 MROH2BQ7Z745 1585 aa13.13□□□□□ -0.31
SPIDR-213ENST00000521214 UNC13AQ9UPW8 1703 aa13.06□□□□□ -0.32
SPIDR-213ENST00000521214 LOC105371045A0A1W2PR82 267 aa13.05□□□□□ -0.32
SPIDR-213ENST00000521214 TRIM41Q8WV44 630 aa13.05□□□□□ -0.32
SPIDR-213ENST00000521214 WIZO95785 1651 aa13.04□□□□□ -0.32
SPIDR-213ENST00000521214 MYT1Q01538 1121 aa12.99□□□□□ -0.33
SPIDR-213ENST00000521214 BICRAQ9NZM4 1560 aa12.98□□□□□ -0.33
SPIDR-213ENST00000521214 RANGAP1P46060 587 aaPredicted RBP12.92□□□□□ -0.34
SPIDR-213ENST00000521214 DNAJC5BQ9UF47 199 aa12.89□□□□□ -0.35
SPIDR-213ENST00000521214 BAZ1AQ9NRL2 1556 aaPredicted RBP12.87□□□□□ -0.35
SPIDR-213ENST00000521214 TTBK1Q5TCY1 1321 aaPredicted RBP12.85□□□□□ -0.35
SPIDR-213ENST00000521214 SMARCA4P51532 1647 aa12.83□□□□□ -0.36
SPIDR-213ENST00000521214 PPARGC1BQ86YN6 1023 aaKnown RBP12.81□□□□□ -0.36
SPIDR-213ENST00000521214 HRCP23327 699 aa12.8□□□□□ -0.36
SPIDR-213ENST00000521214 CCDC88BA6NC98 1476 aa12.76□□□□□ -0.37
SPIDR-213ENST00000521214 BAZ1BQ9UIG0 1483 aaKnown RBP12.76□□□□□ -0.37
SPIDR-213ENST00000521214 ATAD2BQ9ULI0 1458 aa12.73□□□□□ -0.37
SPIDR-213ENST00000521214 ABCC8Q09428 1581 aa12.72□□□□□ -0.37
SPIDR-213ENST00000521214 EIF4G1Q04637 1599 aaKnown RBP12.69□□□□□ -0.38
SPIDR-213ENST00000521214 UBTFP17480 764 aaKnown RBP12.64□□□□□ -0.39
SPIDR-213ENST00000521214 TOP2AP11388 1531 aaKnown RBP12.63□□□□□ -0.39
SPIDR-213ENST00000521214 SMARCA2P51531 1590 aa12.6□□□□□ -0.39
SPIDR-213ENST00000521214 CC2D2AQ9P2K1 1620 aa12.57□□□□□ -0.4
SPIDR-213ENST00000521214 PCGF6Q9BYE7 350 aa12.56□□□□□ -0.4
SPIDR-213ENST00000521214 SOGA1O94964 1423 aa12.52□□□□□ -0.4
SPIDR-213ENST00000521214 NESP48681 1621 aa12.51□□□□□ -0.41
SPIDR-213ENST00000521214 RUSC2Q8N2Y8 1516 aa12.5□□□□□ -0.41
SPIDR-213ENST00000521214 WRNQ14191 1432 aaPredicted RBP eCLIP12.47□□□□□ -0.41
SPIDR-213ENST00000521214 NCAPD3P42695 1498 aa12.45□□□□□ -0.42
SPIDR-213ENST00000521214 SCAF1Q9H7N4 1312 aaKnown RBP12.43□□□□□ -0.42
SPIDR-213ENST00000521214 CSRNP3Q8WYN3 585 aa12.43□□□□□ -0.42
SPIDR-213ENST00000521214 ATP1B4Q9UN42 357 aaPredicted RBP12.41□□□□□ -0.42
SPIDR-213ENST00000521214 P3H3Q8IVL6 736 aa12.38□□□□□ -0.43
SPIDR-213ENST00000521214 CADPSQ9ULU8 1353 aa12.36□□□□□ -0.43
SPIDR-213ENST00000521214 PEG3Q9GZU2 1588 aa12.34□□□□□ -0.43
SPIDR-213ENST00000521214 FBLN2P98095 1184 aa12.33□□□□□ -0.44
SPIDR-213ENST00000521214 SYNJ1O43426 1573 aa12.33□□□□□ -0.44
SPIDR-213ENST00000521214 ARID3CA6NKF2 412 aa12.3□□□□□ -0.44
SPIDR-213ENST00000521214 HMGXB3Q12766 1538 aa12.28□□□□□ -0.44
SPIDR-213ENST00000521214 FANCD2Q9BXW9 1451 aa12.27□□□□□ -0.45
SPIDR-213ENST00000521214 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.45
SPIDR-213ENST00000521214 RAD54L2Q9Y4B4 1467 aa12.25□□□□□ -0.45
SPIDR-213ENST00000521214 CFTRP13569 1480 aa12.25□□□□□ -0.45
SPIDR-213ENST00000521214 CUX2O14529 1486 aa12.23□□□□□ -0.45
SPIDR-213ENST00000521214 CUX1P39880 1505 aa12.22□□□□□ -0.45
SPIDR-213ENST00000521214 ERCC6Q03468 1493 aa12.21□□□□□ -0.45
SPIDR-213ENST00000521214 APLP2Q06481 763 aa12.19□□□□□ -0.46
SPIDR-213ENST00000521214 RAPGEF2Q9Y4G8 1499 aa12.17□□□□□ -0.46
SPIDR-213ENST00000521214 ITGAEP38570 1179 aa12.17□□□□□ -0.46
SPIDR-213ENST00000521214 FGD5Q6ZNL6 1462 aa12.17□□□□□ -0.46
SPIDR-213ENST00000521214 CEP162Q5TB80 1403 aa12.15□□□□□ -0.46
SPIDR-213ENST00000521214 CEP164Q9UPV0 1460 aa12.15□□□□□ -0.47
SPIDR-213ENST00000521214 HNRNPUL2Q1KMD3 747 aaKnown RBP12.13□□□□□ -0.47
SPIDR-213ENST00000521214 PDS5BQ9NTI5 1447 aa12.12□□□□□ -0.47
SPIDR-213ENST00000521214 KIF27Q86VH2 1401 aa12.12□□□□□ -0.47
SPIDR-213ENST00000521214 TRIM26Q12899 539 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-213ENST00000521214 AQRO60306 1485 aaKnown RBP eCLIP12.08□□□□□ -0.47
SPIDR-213ENST00000521214 GOLGA3Q08378 1498 aa12.07□□□□□ -0.48
SPIDR-213ENST00000521214 BCL11AQ9H165 835 aa12.07□□□□□ -0.48
SPIDR-213ENST00000521214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.07□□□□□ -0.48
SPIDR-213ENST00000521214 CLIP1P30622 1438 aa12.07□□□□□ -0.48
SPIDR-213ENST00000521214 URB2Q14146 1524 aaKnown RBP12.06□□□□□ -0.48
SPIDR-213ENST00000521214 TOP2BQ02880 1626 aa12.06□□□□□ -0.48
SPIDR-213ENST00000521214 TOPBP1Q92547 1522 aa12.06□□□□□ -0.48
SPIDR-213ENST00000521214 CARMIL1Q5VZK9 1371 aa12.06□□□□□ -0.48
SPIDR-213ENST00000521214 POLA1P09884 1462 aaPredicted RBP12.05□□□□□ -0.48
SPIDR-213ENST00000521214 GTF3C3Q9Y5Q9 886 aa12.04□□□□□ -0.48
SPIDR-213ENST00000521214 IGF1RP08069 1367 aa12.04□□□□□ -0.48
SPIDR-213ENST00000521214 CENPBP07199 599 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-213ENST00000521214 KIF21AQ7Z4S6 1674 aa12.02□□□□□ -0.48
SPIDR-213ENST00000521214 TNIKQ9UKE5 1360 aa12.02□□□□□ -0.49
SPIDR-213ENST00000521214 CHMP7Q8WUX9 453 aaPredicted RBP12.01□□□□□ -0.49
SPIDR-213ENST00000521214 ACIN1Q9UKV3 1341 aaKnown RBP12□□□□□ -0.49
SPIDR-213ENST00000521214 EEA1Q15075 1411 aa11.99□□□□□ -0.49
SPIDR-213ENST00000521214 ZNF608Q9ULD9 1512 aaPredicted RBP11.98□□□□□ -0.49
SPIDR-213ENST00000521214 PRKCSHP14314 528 aaPredicted RBP11.98□□□□□ -0.49
SPIDR-213ENST00000521214 KANK4Q5T7N3 995 aaPredicted RBP11.97□□□□□ -0.49
SPIDR-213ENST00000521214 LAMC3Q9Y6N6 1575 aa11.96□□□□□ -0.5
SPIDR-213ENST00000521214 CCER1Q8TC90 406 aaPredicted RBP11.94□□□□□ -0.5
SPIDR-213ENST00000521214 NEUROD1Q13562 356 aa11.94□□□□□ -0.5
SPIDR-213ENST00000521214 DNMBPQ6XZF7 1577 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms