RNA–Protein interactions for RNA: ENST00000474216.5

EXOSC10-207, Transcript of exosome component 10, humanhuman

TSL 2

Gene EXOSC10, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC10-207ENST00000474216 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
EXOSC10-207ENST00000474216 SHROOM4Q9ULL8 1493 aa25.36■■□□□ 1.65
EXOSC10-207ENST00000474216 ZCCHC6Q5VYS8 1495 aaKnown RBP25.19■■□□□ 1.62
EXOSC10-207ENST00000474216 SUPT5HO00267 1087 aaKnown RBP25.1■■□□□ 1.61
EXOSC10-207ENST00000474216 CCDC180Q9P1Z9 1646 aa25.09■■□□□ 1.61
EXOSC10-207ENST00000474216 HRCP23327 699 aa24.76■■□□□ 1.55
EXOSC10-207ENST00000474216 CHIC1Q5VXU3 224 aa24.75■■□□□ 1.55
EXOSC10-207ENST00000474216 MYO15BQ96JP2 1530 aa24.7■■□□□ 1.54
EXOSC10-207ENST00000474216 DCAF1Q9Y4B6 1507 aa24.46■■□□□ 1.51
EXOSC10-207ENST00000474216 PCGF6Q9BYE7 350 aa24.32■■□□□ 1.48
EXOSC10-207ENST00000474216 DCAF8L2P0C7V8 631 aa24.21■■□□□ 1.47
EXOSC10-207ENST00000474216 PPARGC1BQ86YN6 1023 aaKnown RBP23.98■■□□□ 1.43
EXOSC10-207ENST00000474216 LOC105371045A0A1W2PR82 267 aa23.91■■□□□ 1.42
EXOSC10-207ENST00000474216 TRIM26Q12899 539 aaPredicted RBP23.91■■□□□ 1.42
EXOSC10-207ENST00000474216 ABCC9O60706 1549 aa23.85■■□□□ 1.41
EXOSC10-207ENST00000474216 ZEB1P37275 1124 aaPredicted RBP23.7■■□□□ 1.38
EXOSC10-207ENST00000474216 RSF1Q96T23 1441 aaPredicted RBP23.6■■□□□ 1.37
EXOSC10-207ENST00000474216 RB1CC1Q8TDY2 1594 aa23.48■■□□□ 1.35
EXOSC10-207ENST00000474216 TRIM41Q8WV44 630 aa23.45■■□□□ 1.35
EXOSC10-207ENST00000474216 SCRIBQ14160 1630 aa23.42■■□□□ 1.34
EXOSC10-207ENST00000474216 PELP1Q8IZL8 1130 aaKnown RBP23.33■■□□□ 1.32
EXOSC10-207ENST00000474216 FAM9AQ8IZU1 332 aaPredicted RBP23.13■■□□□ 1.29
EXOSC10-207ENST00000474216 NACADO15069 1562 aa23.09■■□□□ 1.29
EXOSC10-207ENST00000474216 MROH2BQ7Z745 1585 aa23.01■■□□□ 1.27
EXOSC10-207ENST00000474216 SCAF1Q9H7N4 1312 aaKnown RBP23.01■■□□□ 1.27
EXOSC10-207ENST00000474216 CECR2Q9BXF3 1484 aa23.01■■□□□ 1.27
EXOSC10-207ENST00000474216 WIZO95785 1651 aa22.9■■□□□ 1.26
EXOSC10-207ENST00000474216 BAZ1AQ9NRL2 1556 aaPredicted RBP22.9■■□□□ 1.26
EXOSC10-207ENST00000474216 EIF4G1Q04637 1599 aaKnown RBP22.88■■□□□ 1.25
EXOSC10-207ENST00000474216 EHMT2Q96KQ7 1210 aa22.81■■□□□ 1.24
EXOSC10-207ENST00000474216 WRNQ14191 1432 aaPredicted RBP eCLIP22.77■■□□□ 1.23
EXOSC10-207ENST00000474216 CCER1Q8TC90 406 aaPredicted RBP22.75■■□□□ 1.23
EXOSC10-207ENST00000474216 ACIN1Q9UKV3 1341 aaKnown RBP22.74■■□□□ 1.23
EXOSC10-207ENST00000474216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.71■■□□□ 1.23
EXOSC10-207ENST00000474216 TOP2AP11388 1531 aaKnown RBP22.65■■□□□ 1.22
EXOSC10-207ENST00000474216 CENPBP07199 599 aaPredicted RBP22.58■■□□□ 1.21
EXOSC10-207ENST00000474216 DIEXFQ68CQ4 756 aaKnown RBP22.58■■□□□ 1.21
EXOSC10-207ENST00000474216 NEUROD1Q13562 356 aa22.57■■□□□ 1.2
EXOSC10-207ENST00000474216 TNIKQ9UKE5 1360 aa22.57■■□□□ 1.2
EXOSC10-207ENST00000474216 EEA1Q15075 1411 aa22.56■■□□□ 1.2
EXOSC10-207ENST00000474216 CEP162Q5TB80 1403 aa22.56■■□□□ 1.2
EXOSC10-207ENST00000474216 CCDC88BA6NC98 1476 aa22.53■■□□□ 1.2
EXOSC10-207ENST00000474216 ABCC8Q09428 1581 aa22.5■■□□□ 1.19
EXOSC10-207ENST00000474216 SMARCA2P51531 1590 aa22.49■■□□□ 1.19
EXOSC10-207ENST00000474216 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
EXOSC10-207ENST00000474216 GTF3C3Q9Y5Q9 886 aa22.4■■□□□ 1.18
EXOSC10-207ENST00000474216 SOGA1O94964 1423 aa22.4■■□□□ 1.18
EXOSC10-207ENST00000474216 CSRNP3Q8WYN3 585 aa22.38■■□□□ 1.17
EXOSC10-207ENST00000474216 ZNF316A6NFI3 1004 aaPredicted RBP22.36■■□□□ 1.17
EXOSC10-207ENST00000474216 MYT1Q01538 1121 aa22.36■■□□□ 1.17
EXOSC10-207ENST00000474216 GOLGA3Q08378 1498 aa22.34■■□□□ 1.17
EXOSC10-207ENST00000474216 UBTFP17480 764 aaKnown RBP22.24■■□□□ 1.15
EXOSC10-207ENST00000474216 RUSC2Q8N2Y8 1516 aa22.24■■□□□ 1.15
EXOSC10-207ENST00000474216 TTBK1Q5TCY1 1321 aaPredicted RBP22.22■■□□□ 1.15
EXOSC10-207ENST00000474216 UNC13AQ9UPW8 1703 aa22.19■■□□□ 1.14
EXOSC10-207ENST00000474216 KIF21BO75037 1637 aa22.18■■□□□ 1.14
EXOSC10-207ENST00000474216 CEP164Q9UPV0 1460 aa22.18■■□□□ 1.14
EXOSC10-207ENST00000474216 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
EXOSC10-207ENST00000474216 BAZ1BQ9UIG0 1483 aaKnown RBP22.08■■□□□ 1.12
EXOSC10-207ENST00000474216 VPS8Q8N3P4 1428 aa22.06■■□□□ 1.12
EXOSC10-207ENST00000474216 CLIP1P30622 1438 aa22.05■■□□□ 1.12
EXOSC10-207ENST00000474216 SYNJ1O43426 1573 aa22.01■■□□□ 1.11
EXOSC10-207ENST00000474216 MIER1Q8N108 512 aa21.99■■□□□ 1.11
EXOSC10-207ENST00000474216 HNRNPUL2Q1KMD3 747 aaKnown RBP21.97■■□□□ 1.11
EXOSC10-207ENST00000474216 CLSPNQ9HAW4 1339 aa21.94■■□□□ 1.1
EXOSC10-207ENST00000474216 APLP2Q06481 763 aa21.92■■□□□ 1.1
EXOSC10-207ENST00000474216 YTHDC1Q96MU7 727 aaKnown RBP21.92■■□□□ 1.1
EXOSC10-207ENST00000474216 BICRAQ9NZM4 1560 aa21.91■■□□□ 1.1
EXOSC10-207ENST00000474216 RAPGEF2Q9Y4G8 1499 aa21.85■■□□□ 1.09
EXOSC10-207ENST00000474216 ATAD2BQ9ULI0 1458 aa21.8■■□□□ 1.08
EXOSC10-207ENST00000474216 TOP2BQ02880 1626 aa21.78■■□□□ 1.08
EXOSC10-207ENST00000474216 ERICH3Q5RHP9 1530 aa21.77■■□□□ 1.08
EXOSC10-207ENST00000474216 DHX57Q6P158 1386 aaKnown RBP21.74■■□□□ 1.07
EXOSC10-207ENST00000474216 BIVM-ERCC5R4GMW8 1640 aa21.71■■□□□ 1.07
EXOSC10-207ENST00000474216 PABPN1Q86U42 306 aaKnown RBP eCLIP21.71■■□□□ 1.076e-8■□□□□ 9
EXOSC10-207ENST00000474216 PRXQ9BXM0 1461 aa21.68■■□□□ 1.06
EXOSC10-207ENST00000474216 ARAP1Q96P48 1450 aa21.66■■□□□ 1.06
EXOSC10-207ENST00000474216 CUX2O14529 1486 aa21.64■■□□□ 1.05
EXOSC10-207ENST00000474216 RRBP1Q9P2E9 1410 aaKnown RBP21.64■■□□□ 1.05
EXOSC10-207ENST00000474216 RANGAP1P46060 587 aaPredicted RBP21.52■■□□□ 1.04
EXOSC10-207ENST00000474216 SUPT16HQ9Y5B9 1047 aaKnown RBP21.52■■□□□ 1.04
EXOSC10-207ENST00000474216 KANK4Q5T7N3 995 aaPredicted RBP21.51■■□□□ 1.03
EXOSC10-207ENST00000474216 CCNB3Q8WWL7 1395 aa21.47■■□□□ 1.03
EXOSC10-207ENST00000474216 KIF27Q86VH2 1401 aa21.46■■□□□ 1.03
EXOSC10-207ENST00000474216 CUX1P39880 1505 aa21.41■■□□□ 1.02
EXOSC10-207ENST00000474216 HMGXB3Q12766 1538 aa21.39■■□□□ 1.02
EXOSC10-207ENST00000474216 MAP3K1Q13233 1512 aa21.39■■□□□ 1.02
EXOSC10-207ENST00000474216 ARHGAP35Q9NRY4 1499 aa21.39■■□□□ 1.01
EXOSC10-207ENST00000474216 NCAPD3P42695 1498 aa21.34■■□□□ 1.01
EXOSC10-207ENST00000474216 MAPKBP1O60336 1514 aa21.3■■□□□ 1
EXOSC10-207ENST00000474216 RAB3GAP2Q9H2M9 1393 aa21.29■■□□□ 1
EXOSC10-207ENST00000474216 TSHZ2Q9NRE2 1034 aa21.29■■□□□ 1
EXOSC10-207ENST00000474216 CFTRP13569 1480 aa21.28■■□□□ 1
EXOSC10-207ENST00000474216 TIAM1Q13009 1591 aa21.27■■□□□ 1
EXOSC10-207ENST00000474216 SETD5Q9C0A6 1442 aa21.25■□□□□ 0.99
EXOSC10-207ENST00000474216 TIMELESSQ9UNS1 1208 aa21.23■□□□□ 0.99
EXOSC10-207ENST00000474216 LRRC9Q6ZRR7 1453 aa21.18■□□□□ 0.98
EXOSC10-207ENST00000474216 PRDM2Q13029 1718 aa21.17■□□□□ 0.98
EXOSC10-207ENST00000474216 IGF1RP08069 1367 aa21.17■□□□□ 0.98
EXOSC10-207ENST00000474216 ITGAEP38570 1179 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms