RNA–Protein interactions for RNA: ENST00000304457.11

EXOSC10-201, Transcript of exosome component 10, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EXOSC10, Length 2,721 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC10-201ENST00000304457 NISCHQ9Y2I1 1504 aa20.73■□□□□ 0.91
EXOSC10-201ENST00000304457 ABCC9O60706 1549 aa19.55■□□□□ 0.72
EXOSC10-201ENST00000304457 CCDC180Q9P1Z9 1646 aa19.23■□□□□ 0.67
EXOSC10-201ENST00000304457 DNAJC5BQ9UF47 199 aa18.95■□□□□ 0.62
EXOSC10-201ENST00000304457 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
EXOSC10-201ENST00000304457 NACADO15069 1562 aa18.32■□□□□ 0.52
EXOSC10-201ENST00000304457 DNAJC5Q9H3Z4 198 aa18.31■□□□□ 0.52
EXOSC10-201ENST00000304457 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
EXOSC10-201ENST00000304457 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
EXOSC10-201ENST00000304457 MYO15BQ96JP2 1530 aa17.96■□□□□ 0.47
EXOSC10-201ENST00000304457 BICRAQ9NZM4 1560 aa17.95■□□□□ 0.46
EXOSC10-201ENST00000304457 PABPN1Q86U42 306 aaKnown RBP eCLIP17.89■□□□□ 0.456e-8■□□□□ 9
EXOSC10-201ENST00000304457 CECR2Q9BXF3 1484 aa17.85■□□□□ 0.45
EXOSC10-201ENST00000304457 CC2D2AQ9P2K1 1620 aa17.78■□□□□ 0.44
EXOSC10-201ENST00000304457 CUX2O14529 1486 aa17.6■□□□□ 0.41
EXOSC10-201ENST00000304457 EIF4G1Q04637 1599 aaKnown RBP17.59■□□□□ 0.41
EXOSC10-201ENST00000304457 DCAF1Q9Y4B6 1507 aa17.35■□□□□ 0.37
EXOSC10-201ENST00000304457 DCAF8L2P0C7V8 631 aa17.3■□□□□ 0.36
EXOSC10-201ENST00000304457 SCRIBQ14160 1630 aa17.07■□□□□ 0.32
EXOSC10-201ENST00000304457 ERCC6Q03468 1493 aa17.06■□□□□ 0.32
EXOSC10-201ENST00000304457 ZCCHC6Q5VYS8 1495 aaKnown RBP17.04■□□□□ 0.32
EXOSC10-201ENST00000304457 SLC24A1O60721 1099 aa16.95■□□□□ 0.3
EXOSC10-201ENST00000304457 NCAPD3P42695 1498 aa16.85■□□□□ 0.29
EXOSC10-201ENST00000304457 TRIM41Q8WV44 630 aa16.83■□□□□ 0.28
EXOSC10-201ENST00000304457 THOC2Q8NI27 1593 aaKnown RBP16.81■□□□□ 0.28
EXOSC10-201ENST00000304457 HMGXB3Q12766 1538 aa16.72■□□□□ 0.27
EXOSC10-201ENST00000304457 LAMC3Q9Y6N6 1575 aa16.65■□□□□ 0.26
EXOSC10-201ENST00000304457 SMARCA2P51531 1590 aa16.61■□□□□ 0.25
EXOSC10-201ENST00000304457 ATAD2BQ9ULI0 1458 aa16.56■□□□□ 0.24
EXOSC10-201ENST00000304457 NESP48681 1621 aa16.51■□□□□ 0.23
EXOSC10-201ENST00000304457 BAZ1AQ9NRL2 1556 aaPredicted RBP16.51■□□□□ 0.23
EXOSC10-201ENST00000304457 PDS5BQ9NTI5 1447 aa16.5■□□□□ 0.23
EXOSC10-201ENST00000304457 KIF21AQ7Z4S6 1674 aa16.44■□□□□ 0.22
EXOSC10-201ENST00000304457 WDR62O43379 1518 aa16.43■□□□□ 0.22
EXOSC10-201ENST00000304457 MRC2Q9UBG0 1479 aa16.4■□□□□ 0.22
EXOSC10-201ENST00000304457 OSCARQ8IYS5 282 aa16.39■□□□□ 0.21
EXOSC10-201ENST00000304457 PEG3Q9GZU2 1588 aa16.39■□□□□ 0.21
EXOSC10-201ENST00000304457 SMARCA4P51532 1647 aa16.36■□□□□ 0.21
EXOSC10-201ENST00000304457 BAZ1BQ9UIG0 1483 aaKnown RBP16.34■□□□□ 0.21
EXOSC10-201ENST00000304457 RIMBP3CA6NJZ7 1639 aa16.31■□□□□ 0.2
EXOSC10-201ENST00000304457 RIMBP3BA6NNM3 1639 aa16.31■□□□□ 0.2
EXOSC10-201ENST00000304457 RIMBP3Q9UFD9 1639 aa16.31■□□□□ 0.2
EXOSC10-201ENST00000304457 SUPT5HO00267 1087 aaKnown RBP16.26■□□□□ 0.19
EXOSC10-201ENST00000304457 AEBP2Q6ZN18 517 aaPredicted RBP16.23■□□□□ 0.19
EXOSC10-201ENST00000304457 CADPSQ9ULU8 1353 aa16.18■□□□□ 0.18
EXOSC10-201ENST00000304457 ARHGEF11O15085 1522 aa16.17■□□□□ 0.18
EXOSC10-201ENST00000304457 CEP164Q9UPV0 1460 aa16.12■□□□□ 0.17
EXOSC10-201ENST00000304457 HRCP23327 699 aa16.04■□□□□ 0.16
EXOSC10-201ENST00000304457 RSF1Q96T23 1441 aaPredicted RBP15.99■□□□□ 0.15
EXOSC10-201ENST00000304457 FANCD2Q9BXW9 1451 aa15.97■□□□□ 0.15
EXOSC10-201ENST00000304457 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
EXOSC10-201ENST00000304457 ARAP1Q96P48 1450 aa15.93■□□□□ 0.14
EXOSC10-201ENST00000304457 IFT140Q96RY7 1462 aa15.91■□□□□ 0.14
EXOSC10-201ENST00000304457 CFTRP13569 1480 aa15.87■□□□□ 0.13
EXOSC10-201ENST00000304457 URB2Q14146 1524 aaKnown RBP15.86■□□□□ 0.13
EXOSC10-201ENST00000304457 PELP1Q8IZL8 1130 aaKnown RBP15.85■□□□□ 0.13
EXOSC10-201ENST00000304457 CYB5RLQ6IPT4 315 aa15.84■□□□□ 0.13
EXOSC10-201ENST00000304457 MROH2BQ7Z745 1585 aa15.81■□□□□ 0.12
EXOSC10-201ENST00000304457 PRDM2Q13029 1718 aa15.79■□□□□ 0.12
EXOSC10-201ENST00000304457 CHD1O14646 1710 aa15.75■□□□□ 0.11
EXOSC10-201ENST00000304457 ABCC8Q09428 1581 aa15.74■□□□□ 0.11
EXOSC10-201ENST00000304457 CHIC1Q5VXU3 224 aa15.73■□□□□ 0.11
EXOSC10-201ENST00000304457 EIF4G3O43432 1585 aaKnown RBP15.73■□□□□ 0.11
EXOSC10-201ENST00000304457 MYT1Q01538 1121 aa15.72■□□□□ 0.11
EXOSC10-201ENST00000304457 ZNF608Q9ULD9 1512 aaPredicted RBP15.69■□□□□ 0.1
EXOSC10-201ENST00000304457 WDR97A6NE52 1622 aa15.69■□□□□ 0.1
EXOSC10-201ENST00000304457 PCGF6Q9BYE7 350 aa15.68■□□□□ 0.1
EXOSC10-201ENST00000304457 CLASP1Q7Z460 1538 aa15.67■□□□□ 0.1
EXOSC10-201ENST00000304457 PRKCSHP14314 528 aaPredicted RBP15.63■□□□□ 0.09
EXOSC10-201ENST00000304457 ILDR1Q86SU0 546 aaPredicted RBP15.6■□□□□ 0.09
EXOSC10-201ENST00000304457 DAXXQ9UER7 740 aaPredicted RBP15.6■□□□□ 0.09
EXOSC10-201ENST00000304457 SYNJ1O43426 1573 aa15.6■□□□□ 0.09
EXOSC10-201ENST00000304457 TOPBP1Q92547 1522 aa15.59■□□□□ 0.09
EXOSC10-201ENST00000304457 PPARGC1BQ86YN6 1023 aaKnown RBP15.56■□□□□ 0.08
EXOSC10-201ENST00000304457 TARBP1Q13395 1621 aaKnown RBP15.56■□□□□ 0.08
EXOSC10-201ENST00000304457 DNMBPQ6XZF7 1577 aa15.56■□□□□ 0.08
EXOSC10-201ENST00000304457 WIZO95785 1651 aa15.55■□□□□ 0.08
EXOSC10-201ENST00000304457 TTBK1Q5TCY1 1321 aaPredicted RBP15.54■□□□□ 0.08
EXOSC10-201ENST00000304457 TOP2AP11388 1531 aaKnown RBP15.51■□□□□ 0.07
EXOSC10-201ENST00000304457 LOC105371045A0A1W2PR82 267 aa15.49■□□□□ 0.07
EXOSC10-201ENST00000304457 MAGI1Q96QZ7 1491 aaPredicted RBP15.47■□□□□ 0.07
EXOSC10-201ENST00000304457 GAPVD1Q14C86 1478 aa15.45■□□□□ 0.06
EXOSC10-201ENST00000304457 AQRO60306 1485 aaKnown RBP eCLIP15.41■□□□□ 0.061e-6■■■■■ 28.7
EXOSC10-201ENST00000304457 APLP2Q06481 763 aa15.4■□□□□ 0.06
EXOSC10-201ENST00000304457 ERCC6L2Q5T890 1561 aa15.4■□□□□ 0.06
EXOSC10-201ENST00000304457 SYNJ2O15056 1496 aa15.37■□□□□ 0.05
EXOSC10-201ENST00000304457 SNAPC4Q5SXM2 1469 aa15.36■□□□□ 0.05
EXOSC10-201ENST00000304457 KIF13AQ9H1H9 1805 aa15.36■□□□□ 0.05
EXOSC10-201ENST00000304457 POLA1P09884 1462 aaPredicted RBP15.34■□□□□ 0.05
EXOSC10-201ENST00000304457 FBLN2P98095 1184 aa15.33■□□□□ 0.04
EXOSC10-201ENST00000304457 GRIN2BQ13224 1484 aa15.32■□□□□ 0.04
EXOSC10-201ENST00000304457 CHMP7Q8WUX9 453 aaPredicted RBP15.28■□□□□ 0.04
EXOSC10-201ENST00000304457 KDM4FA0A1W2PPD8 638 aa15.23■□□□□ 0.03
EXOSC10-201ENST00000304457 SOGA1O94964 1423 aa15.23■□□□□ 0.03
EXOSC10-201ENST00000304457 ERICH6Q7L0X2 663 aa15.22■□□□□ 0.03
EXOSC10-201ENST00000304457 SHROOM2Q13796 1616 aa15.21■□□□□ 0.03
EXOSC10-201ENST00000304457 ABCC10Q5T3U5 1492 aa15.21■□□□□ 0.03
EXOSC10-201ENST00000304457 EHMT2Q96KQ7 1210 aa15.21■□□□□ 0.02
EXOSC10-201ENST00000304457 KDM6BO15054 1643 aa15.21■□□□□ 0.02
EXOSC10-201ENST00000304457 MAPKBP1O60336 1514 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms