RNA–Protein interactions for RNA: ENST00000493441.5

SMYD3-217, Transcript of SET and MYND domain containing 3, humanhuman

TSL 2

Gene SMYD3, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-217ENST00000493441 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
SMYD3-217ENST00000493441 AEBP2Q6ZN18 517 aaPredicted RBP23■■□□□ 1.27
SMYD3-217ENST00000493441 PHF23Q9BUL5 403 aaPredicted RBP20.99■□□□□ 0.95
SMYD3-217ENST00000493441 PLPPR3Q6T4P5 718 aa19.81■□□□□ 0.76
SMYD3-217ENST00000493441 SENP3Q9H4L4 574 aaPredicted RBP19.31■□□□□ 0.68
SMYD3-217ENST00000493441 EHMT2Q96KQ7 1210 aa18.85■□□□□ 0.61
SMYD3-217ENST00000493441 KCNA4P22459 653 aa18.64■□□□□ 0.57
SMYD3-217ENST00000493441 ADRA2BP18089 450 aa18.47■□□□□ 0.55
SMYD3-217ENST00000493441 CSRNP3Q8WYN3 585 aa18.14■□□□□ 0.49
SMYD3-217ENST00000493441 PPP6R1Q9UPN7 881 aa18.07■□□□□ 0.48
SMYD3-217ENST00000493441 SLC4A1APQ9BWU0 796 aaKnown RBP17.96■□□□□ 0.47
SMYD3-217ENST00000493441 FOXD1Q16676 465 aa17.75■□□□□ 0.43
SMYD3-217ENST00000493441 PPP4R3CPQ6ZMV5 832 aa17.6■□□□□ 0.41
SMYD3-217ENST00000493441 SLC24A1O60721 1099 aa17.52■□□□□ 0.4
SMYD3-217ENST00000493441 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
SMYD3-217ENST00000493441 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
SMYD3-217ENST00000493441 ZBTB22O15209 634 aa17.21■□□□□ 0.35
SMYD3-217ENST00000493441 AMER1Q5JTC6 1135 aaPredicted RBP17.12■□□□□ 0.33
SMYD3-217ENST00000493441 RTN4Q9NQC3 1192 aaKnown RBP17.09■□□□□ 0.33
SMYD3-217ENST00000493441 PIAS4Q8N2W9 510 aaPredicted RBP17.02■□□□□ 0.32
SMYD3-217ENST00000493441 CNKSR2Q8WXI2 1034 aa16.85■□□□□ 0.29
SMYD3-217ENST00000493441 FOXD4L1Q9NU39 408 aa16.81■□□□□ 0.28
SMYD3-217ENST00000493441 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
SMYD3-217ENST00000493441 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
SMYD3-217ENST00000493441 FKBP8Q14318 412 aa16.26■□□□□ 0.19
SMYD3-217ENST00000493441 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
SMYD3-217ENST00000493441 ATXN8OSP0DMR3 200 aa16.15■□□□□ 0.18
SMYD3-217ENST00000493441 MAPK8IP2Q13387 824 aaPredicted RBP16.02■□□□□ 0.16
SMYD3-217ENST00000493441 SLC4A2P04920 1241 aa16.01■□□□□ 0.15
SMYD3-217ENST00000493441 MYCNP04198 464 aaPredicted RBP15.94■□□□□ 0.14
SMYD3-217ENST00000493441 MSH5O43196 834 aa15.88■□□□□ 0.13
SMYD3-217ENST00000493441 HOXD11P31277 338 aaPredicted RBP15.84■□□□□ 0.13
SMYD3-217ENST00000493441 PLCB2Q00722 1185 aa15.73■□□□□ 0.11
SMYD3-217ENST00000493441 DMRT2Q9Y5R5 561 aa15.64■□□□□ 0.09
SMYD3-217ENST00000493441 BCANQ96GW7 911 aa15.5■□□□□ 0.07
SMYD3-217ENST00000493441 HAP1P54257 671 aaPredicted RBP15.41■□□□□ 0.06
SMYD3-217ENST00000493441 ATF5Q9Y2D1 282 aaPredicted RBP15.39■□□□□ 0.05
SMYD3-217ENST00000493441 FBXO3Q9UK99 471 aa15.37■□□□□ 0.05
SMYD3-217ENST00000493441 TAOK2Q9UL54 1235 aa15.37■□□□□ 0.05
SMYD3-217ENST00000493441 PRKCSHP14314 528 aaPredicted RBP15.36■□□□□ 0.05
SMYD3-217ENST00000493441 VSIG10Q8N0Z9 540 aa15.31■□□□□ 0.04
SMYD3-217ENST00000493441 SAMD1Q6SPF0 538 aaPredicted RBP15.2■□□□□ 0.02
SMYD3-217ENST00000493441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
SMYD3-217ENST00000493441 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
SMYD3-217ENST00000493441 VASPP50552 380 aaPredicted RBP15.14■□□□□ 0.01
SMYD3-217ENST00000493441 PROM2Q8N271 834 aa15.13■□□□□ 0.01
SMYD3-217ENST00000493441 DCAF8L2P0C7V8 631 aa15.09■□□□□ 0.01
SMYD3-217ENST00000493441 TPRNQ4KMQ1 711 aa15.06■□□□□ 0
SMYD3-217ENST00000493441 SPDYE4A6NLX3 237 aa15.05■□□□□ -0
SMYD3-217ENST00000493441 PKD2Q13563 968 aa15.03■□□□□ -0
SMYD3-217ENST00000493441 IFNLR1Q8IU57 520 aaPredicted RBP15.02■□□□□ -0
SMYD3-217ENST00000493441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.98□□□□□ -0.019e-7■□□□□ 8.5
SMYD3-217ENST00000493441 ZNF219Q9P2Y4 722 aaPredicted RBP14.98□□□□□ -0.01
SMYD3-217ENST00000493441 KDM2AQ9Y2K7 1162 aa14.98□□□□□ -0.01
SMYD3-217ENST00000493441 U3KPZ7 1027 aaPredicted RBP14.96□□□□□ -0.01
SMYD3-217ENST00000493441 BBXQ8WY36 941 aaPredicted RBP14.92□□□□□ -0.02
SMYD3-217ENST00000493441 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.9□□□□□ -0.02
SMYD3-217ENST00000493441 FBLN2P98095 1184 aa14.86□□□□□ -0.03
SMYD3-217ENST00000493441 MKRN4PQ13434 485 aaPredicted RBP14.82□□□□□ -0.04
SMYD3-217ENST00000493441 PAXIP1Q6ZW49 1069 aaPredicted RBP14.77□□□□□ -0.05
SMYD3-217ENST00000493441 NPM1P06748 294 aaKnown RBP eCLIP14.74□□□□□ -0.05
SMYD3-217ENST00000493441 DCAF8L1A6NGE4 600 aa14.72□□□□□ -0.05
SMYD3-217ENST00000493441 APLP2Q06481 763 aa14.72□□□□□ -0.05
SMYD3-217ENST00000493441 CFAP44Q96MT7 982 aa14.7□□□□□ -0.06
SMYD3-217ENST00000493441 ECM2O94769 699 aaPredicted RBP14.65□□□□□ -0.06
SMYD3-217ENST00000493441 TIMELESSQ9UNS1 1208 aa14.64□□□□□ -0.07
SMYD3-217ENST00000493441 SPOCK2Q92563 424 aa14.62□□□□□ -0.07
SMYD3-217ENST00000493441 SPRYD3Q8NCJ5 442 aa14.61□□□□□ -0.07
SMYD3-217ENST00000493441 TSHZ2Q9NRE2 1034 aa14.59□□□□□ -0.07
SMYD3-217ENST00000493441 DNAJC5Q9H3Z4 198 aa14.57□□□□□ -0.08
SMYD3-217ENST00000493441 TULP1O00294 542 aaPredicted RBP14.52□□□□□ -0.09
SMYD3-217ENST00000493441 ARXQ96QS3 562 aa14.52□□□□□ -0.09
SMYD3-217ENST00000493441 DAXXQ9UER7 740 aaPredicted RBP14.51□□□□□ -0.09
SMYD3-217ENST00000493441 RGL2O15211 777 aa14.5□□□□□ -0.09
SMYD3-217ENST00000493441 NBR1Q14596 966 aa14.49□□□□□ -0.09
SMYD3-217ENST00000493441 ERICH6Q7L0X2 663 aa14.49□□□□□ -0.09
SMYD3-217ENST00000493441 KLHL34Q8N239 644 aa14.48□□□□□ -0.09
SMYD3-217ENST00000493441 GTF3C3Q9Y5Q9 886 aa14.46□□□□□ -0.09
SMYD3-217ENST00000493441 STAG3Q9UJ98 1225 aa14.32□□□□□ -0.12
SMYD3-217ENST00000493441 CHGAP10645 457 aaKnown RBP14.31□□□□□ -0.12
SMYD3-217ENST00000493441 POLA2Q14181 598 aa14.28□□□□□ -0.12
SMYD3-217ENST00000493441 TMEM132AQ24JP5 1023 aa14.25□□□□□ -0.13
SMYD3-217ENST00000493441 HS6ST3Q8IZP7 471 aa14.22□□□□□ -0.13
SMYD3-217ENST00000493441 PLCD3Q8N3E9 789 aa14.21□□□□□ -0.13
SMYD3-217ENST00000493441 ZBTB12Q9Y330 459 aaPredicted RBP14.21□□□□□ -0.13
SMYD3-217ENST00000493441 TRHP20396 242 aaPredicted RBP14.18□□□□□ -0.14
SMYD3-217ENST00000493441 TRIM41Q8WV44 630 aa14.16□□□□□ -0.14
SMYD3-217ENST00000493441 HOMEZQ8IX15 550 aa14.14□□□□□ -0.15
SMYD3-217ENST00000493441 SPINK5Q9NQ38 1064 aaPredicted RBP14.12□□□□□ -0.15
SMYD3-217ENST00000493441 CIZ1Q9ULV3 898 aaPredicted RBP14.1□□□□□ -0.15
SMYD3-217ENST00000493441 MIER1Q8N108 512 aa14.07□□□□□ -0.16
SMYD3-217ENST00000493441 ZBTB47Q9UFB7 747 aaPredicted RBP14.04□□□□□ -0.16
SMYD3-217ENST00000493441 C14orf37Q86TY3 774 aa14.02□□□□□ -0.17
SMYD3-217ENST00000493441 ZNF692Q9BU19 519 aaPredicted RBP14□□□□□ -0.17
SMYD3-217ENST00000493441 SSUH2Q9Y2M2 353 aa14□□□□□ -0.17
SMYD3-217ENST00000493441 NKX1-1Q15270 411 aaPredicted RBP13.99□□□□□ -0.17
SMYD3-217ENST00000493441 GTPBP6O43824 516 aaPredicted RBP13.97□□□□□ -0.17
SMYD3-217ENST00000493441 RNF25Q96BH1 459 aaPredicted RBP13.96□□□□□ -0.17
SMYD3-217ENST00000493441 CAPN15O75808 1086 aa13.95□□□□□ -0.18
SMYD3-217ENST00000493441 SPDYE2BA6NHP3 402 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms