Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 RPS2P35-201ENST00000443417 897 ntBASIC22.01■■□□□ 1.11
PPP1R3EQ9H7J1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PPP1R3EQ9H7J1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PPP1R3EQ9H7J1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PPP1R3EQ9H7J1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22■■□□□ 1.11
PPP1R3EQ9H7J1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22■■□□□ 1.11
PPP1R3EQ9H7J1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22■■□□□ 1.11
PPP1R3EQ9H7J1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
PPP1R3EQ9H7J1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PPP1R3EQ9H7J1 WHAMMP2-203ENST00000563942 1603 ntBASIC21.99■■□□□ 1.11
PPP1R3EQ9H7J1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PPP1R3EQ9H7J1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.99■■□□□ 1.11
PPP1R3EQ9H7J1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PPP1R3EQ9H7J1 AC135983.2-203ENST00000454486 1613 ntBASIC21.98■■□□□ 1.11
PPP1R3EQ9H7J1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PPP1R3EQ9H7J1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PPP1R3EQ9H7J1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PPP1R3EQ9H7J1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PPP1R3EQ9H7J1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
PPP1R3EQ9H7J1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
PPP1R3EQ9H7J1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PPP1R3EQ9H7J1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.98■■□□□ 1.11
PPP1R3EQ9H7J1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPP1R3EQ9H7J1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPP1R3EQ9H7J1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.97■■□□□ 1.11
PPP1R3EQ9H7J1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPP1R3EQ9H7J1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.97■■□□□ 1.11
PPP1R3EQ9H7J1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.97■■□□□ 1.11
PPP1R3EQ9H7J1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PPP1R3EQ9H7J1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.95■■□□□ 1.1
PPP1R3EQ9H7J1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP1R3EQ9H7J1 AC044849.2-201ENST00000606596 710 ntBASIC21.95■■□□□ 1.1
PPP1R3EQ9H7J1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PPP1R3EQ9H7J1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP1R3EQ9H7J1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.94■■□□□ 1.1
PPP1R3EQ9H7J1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PPP1R3EQ9H7J1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.94■■□□□ 1.1
PPP1R3EQ9H7J1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PPP1R3EQ9H7J1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PPP1R3EQ9H7J1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.93■■□□□ 1.1
PPP1R3EQ9H7J1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.92■■□□□ 1.1
PPP1R3EQ9H7J1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PPP1R3EQ9H7J1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.92■■□□□ 1.1
PPP1R3EQ9H7J1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PPP1R3EQ9H7J1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PPP1R3EQ9H7J1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.92■■□□□ 1.1
PPP1R3EQ9H7J1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PPP1R3EQ9H7J1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PPP1R3EQ9H7J1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PPP1R3EQ9H7J1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PPP1R3EQ9H7J1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.91■■□□□ 1.1
PPP1R3EQ9H7J1 LINC00273-201ENST00000539813 1452 ntBASIC21.91■■□□□ 1.1
PPP1R3EQ9H7J1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PPP1R3EQ9H7J1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PPP1R3EQ9H7J1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PPP1R3EQ9H7J1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PPP1R3EQ9H7J1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PPP1R3EQ9H7J1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PPP1R3EQ9H7J1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
PPP1R3EQ9H7J1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PPP1R3EQ9H7J1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PPP1R3EQ9H7J1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.89■■□□□ 1.09
PPP1R3EQ9H7J1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.89■■□□□ 1.09
PPP1R3EQ9H7J1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PPP1R3EQ9H7J1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PPP1R3EQ9H7J1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PPP1R3EQ9H7J1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.89■■□□□ 1.09
PPP1R3EQ9H7J1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PPP1R3EQ9H7J1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PPP1R3EQ9H7J1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PPP1R3EQ9H7J1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PPP1R3EQ9H7J1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PPP1R3EQ9H7J1 AC021231.2-201ENST00000594613 730 ntBASIC21.87■■□□□ 1.09
PPP1R3EQ9H7J1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PPP1R3EQ9H7J1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.87■■□□□ 1.09
PPP1R3EQ9H7J1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
PPP1R3EQ9H7J1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PPP1R3EQ9H7J1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PPP1R3EQ9H7J1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PPP1R3EQ9H7J1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PPP1R3EQ9H7J1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.86■■□□□ 1.09
PPP1R3EQ9H7J1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PPP1R3EQ9H7J1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PPP1R3EQ9H7J1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PPP1R3EQ9H7J1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.86■■□□□ 1.09
PPP1R3EQ9H7J1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PPP1R3EQ9H7J1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PPP1R3EQ9H7J1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
PPP1R3EQ9H7J1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PPP1R3EQ9H7J1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PPP1R3EQ9H7J1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PPP1R3EQ9H7J1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PPP1R3EQ9H7J1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PPP1R3EQ9H7J1 DUSP8P4-201ENST00000399538 1761 ntBASIC21.85■■□□□ 1.09
PPP1R3EQ9H7J1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PPP1R3EQ9H7J1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.85■■□□□ 1.09
PPP1R3EQ9H7J1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.84■■□□□ 1.09
PPP1R3EQ9H7J1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.84■■□□□ 1.09
PPP1R3EQ9H7J1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PPP1R3EQ9H7J1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms