Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.31■□□□□ 0.36
ALMS1Q8TCU4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALMS1Q8TCU4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.31■□□□□ 0.36
ALMS1Q8TCU4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
ALMS1Q8TCU4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.3■□□□□ 0.36
ALMS1Q8TCU4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ALMS1Q8TCU4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 AC103724.3-201ENST00000564481 992 ntBASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.29■□□□□ 0.36
ALMS1Q8TCU4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
ALMS1Q8TCU4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ALMS1Q8TCU4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALMS1Q8TCU4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALMS1Q8TCU4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.35
ALMS1Q8TCU4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.27■□□□□ 0.35
ALMS1Q8TCU4 MIR4508-201ENST00000584178 70 ntBASIC17.27■□□□□ 0.35
ALMS1Q8TCU4 SMPD5-203ENST00000639008 1464 ntBASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALMS1Q8TCU4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ALMS1Q8TCU4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.25■□□□□ 0.35
ALMS1Q8TCU4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALMS1Q8TCU4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALMS1Q8TCU4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.25■□□□□ 0.35
ALMS1Q8TCU4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALMS1Q8TCU4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.24■□□□□ 0.35
ALMS1Q8TCU4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALMS1Q8TCU4 MIR6765-201ENST00000614092 87 ntBASIC17.24■□□□□ 0.35
ALMS1Q8TCU4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.24■□□□□ 0.35
ALMS1Q8TCU4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALMS1Q8TCU4 AC074183.2-201ENST00000623112 922 ntBASIC17.24■□□□□ 0.35
ALMS1Q8TCU4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALMS1Q8TCU4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ALMS1Q8TCU4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.23■□□□□ 0.35
ALMS1Q8TCU4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ALMS1Q8TCU4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 AL031848.2-201ENST00000607670 837 ntBASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.22■□□□□ 0.35
ALMS1Q8TCU4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALMS1Q8TCU4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.21■□□□□ 0.35
ALMS1Q8TCU4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.21■□□□□ 0.35
ALMS1Q8TCU4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALMS1Q8TCU4 AL135925.1-201ENST00000605920 1701 ntBASIC17.21■□□□□ 0.35
ALMS1Q8TCU4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.21■□□□□ 0.34
ALMS1Q8TCU4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ALMS1Q8TCU4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALMS1Q8TCU4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ALMS1Q8TCU4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALMS1Q8TCU4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ALMS1Q8TCU4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALMS1Q8TCU4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ALMS1Q8TCU4 AC093536.1-201ENST00000569153 554 ntBASIC17.2■□□□□ 0.34
ALMS1Q8TCU4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
ALMS1Q8TCU4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 AL359258.2-201ENST00000564063 1566 ntBASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ALMS1Q8TCU4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.18■□□□□ 0.34
ALMS1Q8TCU4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC17.18■□□□□ 0.34
ALMS1Q8TCU4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ALMS1Q8TCU4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALMS1Q8TCU4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ALMS1Q8TCU4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALMS1Q8TCU4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ALMS1Q8TCU4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms