RNA–Protein interactions for RNA: ENST00000639008.1

SMPD5-203, Transcript of sphingomyelin phosphodiesterase 5, humanhuman

BASIC

Gene SMPD5, Length 1,464 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD5-203ENST00000639008 NISCHQ9Y2I1 1504 aa59.25■■■■■ 7.08
SMPD5-203ENST00000639008 CCDC180Q9P1Z9 1646 aa52.52■■■■■ 6
SMPD5-203ENST00000639008 ABCC9O60706 1549 aa51.43■■■■■ 5.82
SMPD5-203ENST00000639008 DCAF8L2P0C7V8 631 aa49.72■■■■■ 5.55
SMPD5-203ENST00000639008 RB1CC1Q8TDY2 1594 aa49.47■■■■■ 5.51
SMPD5-203ENST00000639008 NACADO15069 1562 aa49.44■■■■■ 5.5
SMPD5-203ENST00000639008 ZCCHC6Q5VYS8 1495 aaKnown RBP49.33■■■■■ 5.49
SMPD5-203ENST00000639008 MYO15BQ96JP2 1530 aa49.15■■■■■ 5.46
SMPD5-203ENST00000639008 DCAF1Q9Y4B6 1507 aa48.99■■■■■ 5.43
SMPD5-203ENST00000639008 UNC13AQ9UPW8 1703 aa48.24■■■■■ 5.31
SMPD5-203ENST00000639008 PABPN1Q86U42 306 aaKnown RBP eCLIP48.18■■■■■ 5.3
SMPD5-203ENST00000639008 SCRIBQ14160 1630 aa48■■■■■ 5.28
SMPD5-203ENST00000639008 BICRAQ9NZM4 1560 aa47.92■■■■■ 5.26
SMPD5-203ENST00000639008 DNAJC5BQ9UF47 199 aa47.65■■■■■ 5.22
SMPD5-203ENST00000639008 SHROOM4Q9ULL8 1493 aa47.41■■■■■ 5.18
SMPD5-203ENST00000639008 EIF4G1Q04637 1599 aaKnown RBP46.67■■■■■ 5.06
SMPD5-203ENST00000639008 CC2D2AQ9P2K1 1620 aa46.47■■■■■ 5.03
SMPD5-203ENST00000639008 CECR2Q9BXF3 1484 aa46.19■■■■■ 4.99
SMPD5-203ENST00000639008 BAZ1AQ9NRL2 1556 aaPredicted RBP45.9■■■■■ 4.94
SMPD5-203ENST00000639008 SMARCA4P51532 1647 aa45.9■■■■■ 4.94
SMPD5-203ENST00000639008 ATAD2BQ9ULI0 1458 aa45.68■■■■■ 4.9
SMPD5-203ENST00000639008 MROH2BQ7Z745 1585 aa45.67■■■■■ 4.9
SMPD5-203ENST00000639008 NCAPD3P42695 1498 aa45.66■■■■■ 4.9
SMPD5-203ENST00000639008 SMARCA2P51531 1590 aa45.62■■■■■ 4.89
SMPD5-203ENST00000639008 PEG3Q9GZU2 1588 aa45.44■■■■■ 4.86
SMPD5-203ENST00000639008 HMGXB3Q12766 1538 aa45.36■■■■■ 4.85
SMPD5-203ENST00000639008 BAZ1BQ9UIG0 1483 aaKnown RBP45.33■■■■■ 4.85
SMPD5-203ENST00000639008 RSF1Q96T23 1441 aaPredicted RBP45.23■■■■■ 4.83
SMPD5-203ENST00000639008 WIZO95785 1651 aa45.16■■■■■ 4.82
SMPD5-203ENST00000639008 TOP2AP11388 1531 aaKnown RBP44.68■■■■■ 4.74
SMPD5-203ENST00000639008 NESP48681 1621 aa44.52■■■■■ 4.72
SMPD5-203ENST00000639008 LAMC3Q9Y6N6 1575 aa44.39■■■■■ 4.7
SMPD5-203ENST00000639008 CADPSQ9ULU8 1353 aa44.37■■■■■ 4.69
SMPD5-203ENST00000639008 ERCC6Q03468 1493 aa44.34■■■■■ 4.69
SMPD5-203ENST00000639008 SUPT5HO00267 1087 aaKnown RBP44.34■■■■■ 4.69
SMPD5-203ENST00000639008 CCDC88BA6NC98 1476 aa44.23■■■■■ 4.67
SMPD5-203ENST00000639008 PDS5BQ9NTI5 1447 aa44.18■■■■■ 4.66
SMPD5-203ENST00000639008 CFTRP13569 1480 aa44.08■■■■■ 4.65
SMPD5-203ENST00000639008 KIF21AQ7Z4S6 1674 aa43.91■■■■■ 4.62
SMPD5-203ENST00000639008 CUX2O14529 1486 aa43.88■■■■■ 4.61
SMPD5-203ENST00000639008 FANCD2Q9BXW9 1451 aa43.82■■■■■ 4.61
SMPD5-203ENST00000639008 CEP164Q9UPV0 1460 aa43.74■■■■■ 4.59
SMPD5-203ENST00000639008 THOC2Q8NI27 1593 aaKnown RBP43.71■■■■■ 4.59
SMPD5-203ENST00000639008 MRC2Q9UBG0 1479 aa43.64■■■■■ 4.58
SMPD5-203ENST00000639008 PRDM2Q13029 1718 aa43.61■■■■■ 4.57
SMPD5-203ENST00000639008 WDR62O43379 1518 aa43.45■■■■■ 4.55
SMPD5-203ENST00000639008 URB2Q14146 1524 aaKnown RBP43.35■■■■■ 4.53
SMPD5-203ENST00000639008 ABCC8Q09428 1581 aa43.16■■■■■ 4.5
SMPD5-203ENST00000639008 DNAJC5Q9H3Z4 198 aa43.12■■■■■ 4.49
SMPD5-203ENST00000639008 TOPBP1Q92547 1522 aa43.12■■■■■ 4.49
SMPD5-203ENST00000639008 DNMBPQ6XZF7 1577 aa43.04■■■■■ 4.48
SMPD5-203ENST00000639008 IFT140Q96RY7 1462 aa42.84■■■■■ 4.45
SMPD5-203ENST00000639008 CUX1P39880 1505 aa42.82■■■■■ 4.45
SMPD5-203ENST00000639008 POLA1P09884 1462 aaPredicted RBP42.75■■■■■ 4.43
SMPD5-203ENST00000639008 SOGA1O94964 1423 aa42.68■■■■■ 4.42
SMPD5-203ENST00000639008 FGD5Q6ZNL6 1462 aa42.67■■■■■ 4.42
SMPD5-203ENST00000639008 WRNQ14191 1432 aaPredicted RBP eCLIP42.65■■■■■ 4.42
SMPD5-203ENST00000639008 ZNF608Q9ULD9 1512 aaPredicted RBP42.62■■■■■ 4.41
SMPD5-203ENST00000639008 RAD54L2Q9Y4B4 1467 aa42.61■■■■■ 4.41
SMPD5-203ENST00000639008 TARBP1Q13395 1621 aaKnown RBP42.59■■■■■ 4.41
SMPD5-203ENST00000639008 TOP2BQ02880 1626 aa42.47■■■■■ 4.39
SMPD5-203ENST00000639008 AQRO60306 1485 aaKnown RBP eCLIP42.46■■■■■ 4.39
SMPD5-203ENST00000639008 SYNJ1O43426 1573 aa42.45■■■■■ 4.39
SMPD5-203ENST00000639008 TDRD9Q8NDG6 1382 aaKnown RBP42.43■■■■■ 4.38
SMPD5-203ENST00000639008 BIVM-ERCC5R4GMW8 1640 aa42.42■■■■■ 4.38
SMPD5-203ENST00000639008 EIF4G3O43432 1585 aaKnown RBP42.38■■■■■ 4.38
SMPD5-203ENST00000639008 ABCA10Q8WWZ4 1543 aa42.26■■■■■ 4.36
SMPD5-203ENST00000639008 WDR97A6NE52 1622 aa42.24■■■■■ 4.35
SMPD5-203ENST00000639008 OSCARQ8IYS5 282 aa42.15■■■■■ 4.34
SMPD5-203ENST00000639008 GAPVD1Q14C86 1478 aa42.13■■■■■ 4.34
SMPD5-203ENST00000639008 GRIN2BQ13224 1484 aa42.1■■■■■ 4.33
SMPD5-203ENST00000639008 FBLN2P98095 1184 aa42.04■■■■■ 4.32
SMPD5-203ENST00000639008 ABCA5Q8WWZ7 1642 aa42.01■■■■■ 4.32
SMPD5-203ENST00000639008 SNAPC4Q5SXM2 1469 aa42.01■■■■■ 4.32
SMPD5-203ENST00000639008 MAGI1Q96QZ7 1491 aaPredicted RBP41.96■■■■■ 4.31
SMPD5-203ENST00000639008 CHMP7Q8WUX9 453 aaPredicted RBP41.93■■■■■ 4.3
SMPD5-203ENST00000639008 PBRM1Q86U86 1689 aa41.92■■■■■ 4.3
SMPD5-203ENST00000639008 TRIM41Q8WV44 630 aa41.86■■■■■ 4.29
SMPD5-203ENST00000639008 CHD1O14646 1710 aa41.82■■■■■ 4.29
SMPD5-203ENST00000639008 SYNJ2O15056 1496 aa41.81■■■■■ 4.28
SMPD5-203ENST00000639008 KIF27Q86VH2 1401 aa41.77■■■■■ 4.28
SMPD5-203ENST00000639008 ERICH3Q5RHP9 1530 aa41.75■■■■■ 4.27
SMPD5-203ENST00000639008 FHAD1B1AJZ9 1412 aa41.66■■■■■ 4.26
SMPD5-203ENST00000639008 IGF1RP08069 1367 aa41.62■■■■■ 4.25
SMPD5-203ENST00000639008 ADAMTS12P58397 1594 aa41.6■■■■■ 4.25
SMPD5-203ENST00000639008 GRIN2AQ12879 1464 aa41.54■■■■■ 4.24
SMPD5-203ENST00000639008 RIMBP3CA6NJZ7 1639 aa41.43■■■■■ 4.22
SMPD5-203ENST00000639008 RIMBP3BA6NNM3 1639 aa41.43■■■■■ 4.22
SMPD5-203ENST00000639008 RIMBP3Q9UFD9 1639 aa41.43■■■■■ 4.22
SMPD5-203ENST00000639008 RUSC2Q8N2Y8 1516 aa41.41■■■■■ 4.22
SMPD5-203ENST00000639008 CHIC1Q5VXU3 224 aa41.4■■■■■ 4.22
SMPD5-203ENST00000639008 ARHGEF11O15085 1522 aa41.4■■■■■ 4.22
SMPD5-203ENST00000639008 CLASP1Q7Z460 1538 aa41.39■■■■■ 4.22
SMPD5-203ENST00000639008 CARMIL1Q5VZK9 1371 aa41.38■■■■■ 4.21
SMPD5-203ENST00000639008 CUL7Q14999 1698 aa41.36■■■■■ 4.21
SMPD5-203ENST00000639008 NUP160Q12769 1436 aa41.34■■■■■ 4.21
SMPD5-203ENST00000639008 CEP170Q5SW79 1584 aa41.29■■■■■ 4.2
SMPD5-203ENST00000639008 CYB5RLQ6IPT4 315 aa41.1■■■■■ 4.17
SMPD5-203ENST00000639008 RAPGEF2Q9Y4G8 1499 aa41.1■■■■■ 4.17
SMPD5-203ENST00000639008 CSRNP3Q8WYN3 585 aa41.09■■■■■ 4.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms