Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC093536.1-201ENST00000569153 554 ntBASIC35.56■■■■□ 3.28
XRN1Q8IZH2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
XRN1Q8IZH2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC35.55■■■■□ 3.28
XRN1Q8IZH2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC35.54■■■■□ 3.28
XRN1Q8IZH2 SMPD5-203ENST00000639008 1464 ntBASIC35.54■■■■□ 3.28
XRN1Q8IZH2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC35.54■■■■□ 3.28
XRN1Q8IZH2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC35.54■■■■□ 3.28
XRN1Q8IZH2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC35.54■■■■□ 3.28
XRN1Q8IZH2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC35.54■■■■□ 3.28
XRN1Q8IZH2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
XRN1Q8IZH2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
XRN1Q8IZH2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
XRN1Q8IZH2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC35.51■■■■□ 3.28
XRN1Q8IZH2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC35.5■■■■□ 3.27
XRN1Q8IZH2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
XRN1Q8IZH2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
XRN1Q8IZH2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
XRN1Q8IZH2 AL592295.1-201ENST00000400984 884 ntBASIC35.49■■■■□ 3.27
XRN1Q8IZH2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC35.49■■■■□ 3.27
XRN1Q8IZH2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC35.49■■■■□ 3.27
XRN1Q8IZH2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC35.48■■■■□ 3.27
XRN1Q8IZH2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
XRN1Q8IZH2 AC019069.1-201ENST00000610008 1333 ntBASIC35.48■■■■□ 3.27
XRN1Q8IZH2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
XRN1Q8IZH2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC35.47■■■■□ 3.27
XRN1Q8IZH2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC35.47■■■■□ 3.27
XRN1Q8IZH2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC35.47■■■■□ 3.27
XRN1Q8IZH2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC35.47■■■■□ 3.27
XRN1Q8IZH2 RP9P-202ENST00000450133 1212 ntBASIC35.46■■■■□ 3.27
XRN1Q8IZH2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC35.46■■■■□ 3.27
XRN1Q8IZH2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC35.46■■■■□ 3.27
XRN1Q8IZH2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC35.44■■■■□ 3.26
XRN1Q8IZH2 AC010980.1-201ENST00000587192 1142 ntBASIC35.44■■■■□ 3.26
XRN1Q8IZH2 AP004833.2-201ENST00000532228 1454 ntBASIC35.44■■■■□ 3.26
XRN1Q8IZH2 AL359258.2-201ENST00000564063 1566 ntBASIC35.43■■■■□ 3.26
XRN1Q8IZH2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC35.43■■■■□ 3.26
XRN1Q8IZH2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
XRN1Q8IZH2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC35.43■■■■□ 3.26
XRN1Q8IZH2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
XRN1Q8IZH2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
XRN1Q8IZH2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC35.42■■■■□ 3.26
XRN1Q8IZH2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC35.41■■■■□ 3.26
XRN1Q8IZH2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC35.41■■■■□ 3.26
XRN1Q8IZH2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
XRN1Q8IZH2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
XRN1Q8IZH2 PVT1_1.1-201ENST00000615125 194 ntBASIC35.4■■■■□ 3.26
XRN1Q8IZH2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC35.4■■■■□ 3.26
XRN1Q8IZH2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC35.4■■■■□ 3.26
XRN1Q8IZH2 KRT8P33-201ENST00000508125 1423 ntBASIC35.4■■■■□ 3.26
XRN1Q8IZH2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
XRN1Q8IZH2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC35.39■■■■□ 3.26
XRN1Q8IZH2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC35.38■■■■□ 3.25
XRN1Q8IZH2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
XRN1Q8IZH2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC35.37■■■■□ 3.25
XRN1Q8IZH2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
XRN1Q8IZH2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC35.37■■■■□ 3.25
XRN1Q8IZH2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
XRN1Q8IZH2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
XRN1Q8IZH2 AC100797.4-201ENST00000631653 1827 ntBASIC35.37■■■■□ 3.25
XRN1Q8IZH2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
XRN1Q8IZH2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC35.36■■■■□ 3.25
XRN1Q8IZH2 GUSBP5-201ENST00000418136 578 ntBASIC35.36■■■■□ 3.25
XRN1Q8IZH2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
XRN1Q8IZH2 AC103834.1-201ENST00000520383 144 ntBASIC35.36■■■■□ 3.25
XRN1Q8IZH2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC35.35■■■■□ 3.25
XRN1Q8IZH2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
XRN1Q8IZH2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC35.34■■■■□ 3.25
XRN1Q8IZH2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC35.34■■■■□ 3.25
XRN1Q8IZH2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
XRN1Q8IZH2 MIR4508-201ENST00000584178 70 ntBASIC35.33■■■■□ 3.25
XRN1Q8IZH2 MIR6765-201ENST00000614092 87 ntBASIC35.33■■■■□ 3.25
XRN1Q8IZH2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC35.33■■■■□ 3.25
XRN1Q8IZH2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
XRN1Q8IZH2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC35.32■■■■□ 3.25
XRN1Q8IZH2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC35.31■■■■□ 3.24
XRN1Q8IZH2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC35.31■■■■□ 3.24
XRN1Q8IZH2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC35.3■■■■□ 3.24
XRN1Q8IZH2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC35.3■■■■□ 3.24
XRN1Q8IZH2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC35.3■■■■□ 3.24
XRN1Q8IZH2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
XRN1Q8IZH2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
XRN1Q8IZH2 HES6-204ENST00000409182 863 ntTSL 2 BASIC35.3■■■■□ 3.24
XRN1Q8IZH2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC35.3■■■■□ 3.24
XRN1Q8IZH2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC35.3■■■■□ 3.24
XRN1Q8IZH2 AC074183.2-201ENST00000623112 922 ntBASIC35.3■■■■□ 3.24
XRN1Q8IZH2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
XRN1Q8IZH2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC35.29■■■■□ 3.24
XRN1Q8IZH2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC35.29■■■■□ 3.24
XRN1Q8IZH2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC35.29■■■■□ 3.24
XRN1Q8IZH2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC35.28■■■■□ 3.24
XRN1Q8IZH2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
XRN1Q8IZH2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC35.28■■■■□ 3.24
XRN1Q8IZH2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC35.28■■■■□ 3.24
XRN1Q8IZH2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC35.28■■■■□ 3.24
XRN1Q8IZH2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC35.28■■■■□ 3.24
XRN1Q8IZH2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC35.27■■■■□ 3.24
XRN1Q8IZH2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC35.27■■■■□ 3.24
XRN1Q8IZH2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
XRN1Q8IZH2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
XRN1Q8IZH2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC35.26■■■■□ 3.23
Retrieved 100 of 98,524 protein–RNA pairs in 196.3 ms