Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC49.15■■■■■ 5.46
XRN1Q8IZH2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC48.98■■■■■ 5.43
XRN1Q8IZH2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC48.33■■■■■ 5.33
XRN1Q8IZH2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC48.05■■■■■ 5.28
XRN1Q8IZH2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC47.57■■■■■ 5.21
XRN1Q8IZH2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC47.19■■■■■ 5.15
XRN1Q8IZH2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC46.87■■■■■ 5.09
XRN1Q8IZH2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC46.79■■■■■ 5.08
XRN1Q8IZH2 AL356512.1-201ENST00000607453 1739 ntBASIC46.75■■■■■ 5.07
XRN1Q8IZH2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC46.72■■■■■ 5.07
XRN1Q8IZH2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC46.61■■■■■ 5.05
XRN1Q8IZH2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC46.56■■■■■ 5.04
XRN1Q8IZH2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC46.48■■■■■ 5.03
XRN1Q8IZH2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC46.4■■■■■ 5.02
XRN1Q8IZH2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC46.11■■■■■ 4.97
XRN1Q8IZH2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC45.99■■■■■ 4.95
XRN1Q8IZH2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC45.92■■■■■ 4.94
XRN1Q8IZH2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC45.8■■■■■ 4.92
XRN1Q8IZH2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC45.77■■■■■ 4.92
XRN1Q8IZH2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC45.35■■■■■ 4.85
XRN1Q8IZH2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC45.35■■■■■ 4.85
XRN1Q8IZH2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC45.35■■■■■ 4.85
XRN1Q8IZH2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC45.18■■■■■ 4.82
XRN1Q8IZH2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC45.15■■■■■ 4.82
XRN1Q8IZH2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC45.14■■■■■ 4.82
XRN1Q8IZH2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC45.11■■■■■ 4.81
XRN1Q8IZH2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC45.07■■■■■ 4.8
XRN1Q8IZH2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC44.89■■■■■ 4.78
XRN1Q8IZH2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC44.88■■■■■ 4.78
XRN1Q8IZH2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC44.85■■■■■ 4.77
XRN1Q8IZH2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC44.66■■■■■ 4.74
XRN1Q8IZH2 AC006077.2-201ENST00000623591 457 ntBASIC44.65■■■■■ 4.74
XRN1Q8IZH2 ZNRF2P1-201ENST00000441407 443 ntBASIC44.64■■■■■ 4.74
XRN1Q8IZH2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC44.63■■■■■ 4.73
XRN1Q8IZH2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC44.4■■■■■ 4.7
XRN1Q8IZH2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC44.29■■■■■ 4.68
XRN1Q8IZH2 AC015813.7-201ENST00000623294 581 ntBASIC44.22■■■■■ 4.67
XRN1Q8IZH2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC44.1■■■■■ 4.65
XRN1Q8IZH2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC44.09■■■■■ 4.65
XRN1Q8IZH2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC43.9■■■■■ 4.62
XRN1Q8IZH2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC43.81■■■■■ 4.6
XRN1Q8IZH2 AP002365.1-201ENST00000603448 772 ntBASIC43.68■■■■■ 4.58
XRN1Q8IZH2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC43.52■■■■■ 4.56
XRN1Q8IZH2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC43.47■■■■■ 4.55
XRN1Q8IZH2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC43.47■■■■■ 4.55
XRN1Q8IZH2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC43.34■■■■■ 4.53
XRN1Q8IZH2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC43.31■■■■■ 4.52
XRN1Q8IZH2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC43.31■■■■■ 4.52
XRN1Q8IZH2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC43.31■■■■■ 4.52
XRN1Q8IZH2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC43.2■■■■■ 4.51
XRN1Q8IZH2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC43.17■■■■■ 4.5
XRN1Q8IZH2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC43.14■■■■■ 4.5
XRN1Q8IZH2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC43.12■■■■■ 4.49
XRN1Q8IZH2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC43.09■■■■■ 4.49
XRN1Q8IZH2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC43.06■■■■■ 4.48
XRN1Q8IZH2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC43.05■■■■■ 4.48
XRN1Q8IZH2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC43■■■■■ 4.47
XRN1Q8IZH2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC42.99■■■■■ 4.47
XRN1Q8IZH2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC42.99■■■■■ 4.47
XRN1Q8IZH2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC42.97■■■■■ 4.47
XRN1Q8IZH2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC42.97■■■■■ 4.47
XRN1Q8IZH2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC42.95■■■■■ 4.47
XRN1Q8IZH2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC42.92■■■■■ 4.46
XRN1Q8IZH2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC42.77■■■■■ 4.44
XRN1Q8IZH2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC42.74■■■■■ 4.43
XRN1Q8IZH2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC42.73■■■■■ 4.43
XRN1Q8IZH2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC42.67■■■■■ 4.42
XRN1Q8IZH2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC42.66■■■■■ 4.42
XRN1Q8IZH2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC42.6■■■■■ 4.41
XRN1Q8IZH2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC42.57■■■■■ 4.41
XRN1Q8IZH2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC42.57■■■■■ 4.4
XRN1Q8IZH2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC42.55■■■■■ 4.4
XRN1Q8IZH2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC42.51■■■■■ 4.4
XRN1Q8IZH2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC42.48■■■■■ 4.39
XRN1Q8IZH2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC42.46■■■■■ 4.39
XRN1Q8IZH2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC42.43■■■■■ 4.38
XRN1Q8IZH2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC42.42■■■■■ 4.38
XRN1Q8IZH2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC42.4■■■■■ 4.38
XRN1Q8IZH2 DYNLL1-208ENST00000550178 581 ntBASIC42.4■■■■■ 4.38
XRN1Q8IZH2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC42.4■■■■■ 4.38
XRN1Q8IZH2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC42.4■■■■■ 4.38
XRN1Q8IZH2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC42.4■■■■■ 4.38
XRN1Q8IZH2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC42.37■■■■■ 4.37
XRN1Q8IZH2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC42.35■■■■■ 4.37
XRN1Q8IZH2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC42.3■■■■■ 4.36
XRN1Q8IZH2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC42.29■■■■■ 4.36
XRN1Q8IZH2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC42.29■■■■■ 4.36
XRN1Q8IZH2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC42.25■■■■■ 4.35
XRN1Q8IZH2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC42.09■■■■■ 4.33
XRN1Q8IZH2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC42.09■■■■■ 4.33
XRN1Q8IZH2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC42.06■■■■■ 4.32
XRN1Q8IZH2 AL031258.1-201ENST00000623562 325 ntBASIC42.06■■■■■ 4.32
XRN1Q8IZH2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC42.05■■■■■ 4.32
XRN1Q8IZH2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC42.04■■■■■ 4.32
XRN1Q8IZH2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC42.03■■■■■ 4.32
XRN1Q8IZH2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC42■■■■■ 4.31
XRN1Q8IZH2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC41.99■■■■■ 4.31
XRN1Q8IZH2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC41.91■■■■■ 4.3
XRN1Q8IZH2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC41.91■■■■■ 4.3
XRN1Q8IZH2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC41.9■■■■■ 4.3
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms