Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF6Q9Y252 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RNF6Q9Y252 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF6Q9Y252 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RNF6Q9Y252 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF6Q9Y252 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF6Q9Y252 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RNF6Q9Y252 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF6Q9Y252 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF6Q9Y252 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF6Q9Y252 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF6Q9Y252 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF6Q9Y252 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF6Q9Y252 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF6Q9Y252 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF6Q9Y252 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RNF6Q9Y252 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF6Q9Y252 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RNF6Q9Y252 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF6Q9Y252 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF6Q9Y252 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF6Q9Y252 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
RNF6Q9Y252 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF6Q9Y252 UNC93B2-201ENST00000285383 730 ntBASIC17.63■□□□□ 0.41
RNF6Q9Y252 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF6Q9Y252 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF6Q9Y252 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF6Q9Y252 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF6Q9Y252 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF6Q9Y252 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF6Q9Y252 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF6Q9Y252 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF6Q9Y252 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF6Q9Y252 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RNF6Q9Y252 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF6Q9Y252 NOC2LP2-201ENST00000407594 1944 ntBASIC17.62■□□□□ 0.41
RNF6Q9Y252 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF6Q9Y252 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RNF6Q9Y252 AL512353.2-201ENST00000448759 1962 ntBASIC17.62■□□□□ 0.41
RNF6Q9Y252 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF6Q9Y252 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF6Q9Y252 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF6Q9Y252 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF6Q9Y252 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RNF6Q9Y252 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF6Q9Y252 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF6Q9Y252 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RNF6Q9Y252 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF6Q9Y252 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.62■□□□□ 0.41
RNF6Q9Y252 AP000525.1-201ENST00000608286 694 ntBASIC17.62■□□□□ 0.41
RNF6Q9Y252 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF6Q9Y252 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF6Q9Y252 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF6Q9Y252 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF6Q9Y252 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF6Q9Y252 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF6Q9Y252 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF6Q9Y252 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF6Q9Y252 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF6Q9Y252 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF6Q9Y252 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF6Q9Y252 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF6Q9Y252 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF6Q9Y252 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF6Q9Y252 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF6Q9Y252 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF6Q9Y252 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.61■□□□□ 0.41
RNF6Q9Y252 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF6Q9Y252 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF6Q9Y252 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF6Q9Y252 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF6Q9Y252 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF6Q9Y252 AC145285.6-201ENST00000604632 637 ntBASIC17.61■□□□□ 0.41
RNF6Q9Y252 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF6Q9Y252 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF6Q9Y252 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF6Q9Y252 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF6Q9Y252 KRT8P9-201ENST00000558927 1449 ntBASIC17.61■□□□□ 0.41
RNF6Q9Y252 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF6Q9Y252 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF6Q9Y252 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF6Q9Y252 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF6Q9Y252 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF6Q9Y252 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF6Q9Y252 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF6Q9Y252 ZNF815P-204ENST00000434898 1737 ntBASIC17.61■□□□□ 0.41
RNF6Q9Y252 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
RNF6Q9Y252 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF6Q9Y252 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF6Q9Y252 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF6Q9Y252 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF6Q9Y252 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF6Q9Y252 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF6Q9Y252 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF6Q9Y252 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF6Q9Y252 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF6Q9Y252 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF6Q9Y252 MIR1238-201ENST00000408483 83 ntBASIC17.6■□□□□ 0.41
RNF6Q9Y252 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF6Q9Y252 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms