RNA–Protein interactions for RNA: ENST00000344979.7

PDE4A-202, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best) BASIC

Gene PDE4A, Length 2,579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-202ENST00000344979 NISCHQ9Y2I1 1504 aa37.79■■■■□ 3.64
PDE4A-202ENST00000344979 SHROOM4Q9ULL8 1493 aa32.51■■■□□ 2.8
PDE4A-202ENST00000344979 CCDC180Q9P1Z9 1646 aa32■■■□□ 2.71
PDE4A-202ENST00000344979 ZCCHC6Q5VYS8 1495 aaKnown RBP31.94■■■□□ 2.7
PDE4A-202ENST00000344979 SUPT5HO00267 1087 aaKnown RBP31.9■■■□□ 2.7
PDE4A-202ENST00000344979 DCAF8L2P0C7V8 631 aa31.69■■■□□ 2.66
PDE4A-202ENST00000344979 CHIC1Q5VXU3 224 aa30.89■■■□□ 2.54
PDE4A-202ENST00000344979 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
PDE4A-202ENST00000344979 MYO15BQ96JP2 1530 aa30.75■■■□□ 2.51
PDE4A-202ENST00000344979 SCRIBQ14160 1630 aa30.21■■■□□ 2.43
PDE4A-202ENST00000344979 ABCC9O60706 1549 aa30.14■■■□□ 2.42
PDE4A-202ENST00000344979 LOC105371045A0A1W2PR82 267 aa30.09■■■□□ 2.41
PDE4A-202ENST00000344979 PCGF6Q9BYE7 350 aa30.07■■■□□ 2.4
PDE4A-202ENST00000344979 RSF1Q96T23 1441 aaPredicted RBP29.97■■■□□ 2.39
PDE4A-202ENST00000344979 HRCP23327 699 aa29.95■■■□□ 2.39
PDE4A-202ENST00000344979 RB1CC1Q8TDY2 1594 aa29.66■■■□□ 2.34
PDE4A-202ENST00000344979 TRIM41Q8WV44 630 aa29.65■■■□□ 2.34
PDE4A-202ENST00000344979 NACADO15069 1562 aa29.65■■■□□ 2.34
PDE4A-202ENST00000344979 CECR2Q9BXF3 1484 aa29.57■■■□□ 2.32
PDE4A-202ENST00000344979 FAM9AQ8IZU1 332 aaPredicted RBP29.52■■■□□ 2.32
PDE4A-202ENST00000344979 PPARGC1BQ86YN6 1023 aaKnown RBP29.46■■■□□ 2.31
PDE4A-202ENST00000344979 MROH2BQ7Z745 1585 aa29.43■■■□□ 2.3
PDE4A-202ENST00000344979 TRIM26Q12899 539 aaPredicted RBP29.38■■■□□ 2.29
PDE4A-202ENST00000344979 EHMT2Q96KQ7 1210 aa29.37■■■□□ 2.29
PDE4A-202ENST00000344979 WIZO95785 1651 aa29.27■■■□□ 2.28
PDE4A-202ENST00000344979 BAZ1AQ9NRL2 1556 aaPredicted RBP29.01■■■□□ 2.23
PDE4A-202ENST00000344979 SMARCA4P51532 1647 aa28.77■■■□□ 2.2
PDE4A-202ENST00000344979 EIF4G1Q04637 1599 aaKnown RBP28.75■■■□□ 2.19
PDE4A-202ENST00000344979 TOP2AP11388 1531 aaKnown RBP28.75■■■□□ 2.19
PDE4A-202ENST00000344979 CCDC88BA6NC98 1476 aa28.72■■■□□ 2.19
PDE4A-202ENST00000344979 UNC13AQ9UPW8 1703 aa28.71■■■□□ 2.19
PDE4A-202ENST00000344979 PABPN1Q86U42 306 aaKnown RBP eCLIP28.7■■■□□ 2.18
PDE4A-202ENST00000344979 ZEB1P37275 1124 aaPredicted RBP28.69■■■□□ 2.18
PDE4A-202ENST00000344979 ABCC8Q09428 1581 aa28.68■■■□□ 2.18
PDE4A-202ENST00000344979 SMARCA2P51531 1590 aa28.61■■■□□ 2.17
PDE4A-202ENST00000344979 SOGA1O94964 1423 aa28.44■■■□□ 2.14
PDE4A-202ENST00000344979 TTBK1Q5TCY1 1321 aaPredicted RBP28.41■■■□□ 2.14
PDE4A-202ENST00000344979 BICRAQ9NZM4 1560 aa28.4■■■□□ 2.14
PDE4A-202ENST00000344979 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.32■■■□□ 2.12
PDE4A-202ENST00000344979 CEP162Q5TB80 1403 aa28.29■■■□□ 2.12
PDE4A-202ENST00000344979 RUSC2Q8N2Y8 1516 aa28.29■■■□□ 2.12
PDE4A-202ENST00000344979 UBTFP17480 764 aaKnown RBP28.28■■■□□ 2.12
PDE4A-202ENST00000344979 CSRNP3Q8WYN3 585 aa28.28■■■□□ 2.12
PDE4A-202ENST00000344979 CCER1Q8TC90 406 aaPredicted RBP28.23■■■□□ 2.11
PDE4A-202ENST00000344979 TNIKQ9UKE5 1360 aa28.19■■■□□ 2.1
PDE4A-202ENST00000344979 WRNQ14191 1432 aaPredicted RBP eCLIP28.17■■■□□ 2.1
PDE4A-202ENST00000344979 EEA1Q15075 1411 aa28.16■■■□□ 2.1
PDE4A-202ENST00000344979 PEG3Q9GZU2 1588 aa28.12■■■□□ 2.09
PDE4A-202ENST00000344979 ATAD2BQ9ULI0 1458 aa28.06■■■□□ 2.08
PDE4A-202ENST00000344979 GOLGA3Q08378 1498 aa28.04■■■□□ 2.08
PDE4A-202ENST00000344979 BAZ1BQ9UIG0 1483 aaKnown RBP28.03■■■□□ 2.08
PDE4A-202ENST00000344979 SYNJ1O43426 1573 aa28■■■□□ 2.07
PDE4A-202ENST00000344979 CEP164Q9UPV0 1460 aa27.87■■■□□ 2.05
PDE4A-202ENST00000344979 RANGAP1P46060 587 aaPredicted RBP27.85■■■□□ 2.05
PDE4A-202ENST00000344979 CLIP1P30622 1438 aa27.77■■■□□ 2.04
PDE4A-202ENST00000344979 KIF21BO75037 1637 aa27.75■■■□□ 2.03
PDE4A-202ENST00000344979 RAPGEF2Q9Y4G8 1499 aa27.72■■■□□ 2.03
PDE4A-202ENST00000344979 HNRNPUL2Q1KMD3 747 aaKnown RBP27.69■■■□□ 2.02
PDE4A-202ENST00000344979 APLP2Q06481 763 aa27.64■■■□□ 2.02
PDE4A-202ENST00000344979 SCAF1Q9H7N4 1312 aaKnown RBP27.64■■■□□ 2.02
PDE4A-202ENST00000344979 DIEXFQ68CQ4 756 aaKnown RBP27.63■■■□□ 2.01
PDE4A-202ENST00000344979 VPS8Q8N3P4 1428 aa27.6■■■□□ 2.01
PDE4A-202ENST00000344979 TOP2BQ02880 1626 aa27.6■■■□□ 2.01
PDE4A-202ENST00000344979 NCAPD3P42695 1498 aa27.47■■□□□ 1.99
PDE4A-202ENST00000344979 BIVM-ERCC5R4GMW8 1640 aa27.45■■□□□ 1.99
PDE4A-202ENST00000344979 HMGXB3Q12766 1538 aa27.43■■□□□ 1.98
PDE4A-202ENST00000344979 ZNF316A6NFI3 1004 aaPredicted RBP27.39■■□□□ 1.98
PDE4A-202ENST00000344979 CUX1P39880 1505 aa27.38■■□□□ 1.97
PDE4A-202ENST00000344979 PRXQ9BXM0 1461 aa27.37■■□□□ 1.97
PDE4A-202ENST00000344979 NEUROD1Q13562 356 aa27.37■■□□□ 1.97
PDE4A-202ENST00000344979 ACIN1Q9UKV3 1341 aaKnown RBP27.36■■□□□ 1.97
PDE4A-202ENST00000344979 ERICH3Q5RHP9 1530 aa27.31■■□□□ 1.96
PDE4A-202ENST00000344979 KIF27Q86VH2 1401 aa27.3■■□□□ 1.96
PDE4A-202ENST00000344979 CFTRP13569 1480 aa27.28■■□□□ 1.96
PDE4A-202ENST00000344979 ARAP1Q96P48 1450 aa27.26■■□□□ 1.96
PDE4A-202ENST00000344979 KANK4Q5T7N3 995 aaPredicted RBP27.24■■□□□ 1.95
PDE4A-202ENST00000344979 CENPBP07199 599 aaPredicted RBP27.23■■□□□ 1.95
PDE4A-202ENST00000344979 YTHDC1Q96MU7 727 aaKnown RBP27.11■■□□□ 1.93
PDE4A-202ENST00000344979 GTF3C3Q9Y5Q9 886 aa27.11■■□□□ 1.93
PDE4A-202ENST00000344979 CUX2O14529 1486 aa27.08■■□□□ 1.92
PDE4A-202ENST00000344979 MIER1Q8N108 512 aa27.04■■□□□ 1.92
PDE4A-202ENST00000344979 ARHGAP35Q9NRY4 1499 aa27.04■■□□□ 1.92
PDE4A-202ENST00000344979 CADPSQ9ULU8 1353 aa27.02■■□□□ 1.92
PDE4A-202ENST00000344979 IGF1RP08069 1367 aa27.01■■□□□ 1.91
PDE4A-202ENST00000344979 ITGAEP38570 1179 aa27.01■■□□□ 1.91
PDE4A-202ENST00000344979 DHX57Q6P158 1386 aaKnown RBP26.99■■□□□ 1.91
PDE4A-202ENST00000344979 FGD5Q6ZNL6 1462 aa26.93■■□□□ 1.9
PDE4A-202ENST00000344979 RRBP1Q9P2E9 1410 aaKnown RBP26.92■■□□□ 1.9
PDE4A-202ENST00000344979 PELP1Q8IZL8 1130 aaKnown RBP26.92■■□□□ 1.9
PDE4A-202ENST00000344979 CARMIL1Q5VZK9 1371 aa26.91■■□□□ 1.9
PDE4A-202ENST00000344979 PRDM2Q13029 1718 aa26.91■■□□□ 1.9
PDE4A-202ENST00000344979 CCNB3Q8WWL7 1395 aa26.9■■□□□ 1.9
PDE4A-202ENST00000344979 CLSPNQ9HAW4 1339 aa26.88■■□□□ 1.89
PDE4A-202ENST00000344979 P3H3Q8IVL6 736 aa26.84■■□□□ 1.89
PDE4A-202ENST00000344979 CC2D2AQ9P2K1 1620 aa26.82■■□□□ 1.88
PDE4A-202ENST00000344979 ATP1B4Q9UN42 357 aaPredicted RBP26.8■■□□□ 1.88
PDE4A-202ENST00000344979 FANCD2Q9BXW9 1451 aa26.78■■□□□ 1.88
PDE4A-202ENST00000344979 TIAM1Q13009 1591 aa26.72■■□□□ 1.87
PDE4A-202ENST00000344979 RAD54L2Q9Y4B4 1467 aa26.71■■□□□ 1.87
PDE4A-202ENST00000344979 FAM50AQ14320 339 aaKnown RBP26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms